RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 CNKSR2Q8WXI2 1034 aa17.24■□□□□ 0.35
LINC00028-201ENST00000435497 OPTNQ96CV9 577 aa17.24■□□□□ 0.35
LINC00028-201ENST00000435497 EFCC1Q9HA90 598 aa17.24■□□□□ 0.35
LINC00028-201ENST00000435497 ARMC5Q96C12 935 aa17.23■□□□□ 0.35
LINC00028-201ENST00000435497 SUCLG2Q96I99 432 aa17.23■□□□□ 0.35
LINC00028-201ENST00000435497 C9orf78Q9NZ63 289 aaPredicted RBP17.23■□□□□ 0.35
LINC00028-201ENST00000435497 RIPOR2Q9Y4F9 1068 aa17.23■□□□□ 0.35
LINC00028-201ENST00000435497 TCP10L2B9ZVM9 353 aa17.22■□□□□ 0.35
LINC00028-201ENST00000435497 ALDH1L1O75891 902 aa17.22■□□□□ 0.35
LINC00028-201ENST00000435497 CRKP46108 304 aa17.22■□□□□ 0.35
LINC00028-201ENST00000435497 TNFAIP1Q13829 316 aa17.22■□□□□ 0.35
LINC00028-201ENST00000435497 BRI3BPQ8WY22 251 aa17.22■□□□□ 0.35
LINC00028-201ENST00000435497 TMEM39BQ9GZU3 492 aa17.22■□□□□ 0.35
LINC00028-201ENST00000435497 EN2P19622 333 aaPredicted RBP17.21■□□□□ 0.35
LINC00028-201ENST00000435497 MAP3K9P80192 1104 aa17.21■□□□□ 0.35
LINC00028-201ENST00000435497 FBXO33Q7Z6M2 555 aa17.21■□□□□ 0.35
LINC00028-201ENST00000435497 MRS2Q9HD23 443 aa17.21■□□□□ 0.35
LINC00028-201ENST00000435497 RBBP6Q7Z6E9 1792 aaKnown RBP17.2■□□□□ 0.34
LINC00028-201ENST00000435497 VGLL4Q14135 290 aa17.2■□□□□ 0.34
LINC00028-201ENST00000435497 SLC4A10Q6U841 1118 aa17.2■□□□□ 0.34
LINC00028-201ENST00000435497 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.2■□□□□ 0.34
LINC00028-201ENST00000435497 SRCIN1Q9C0H9 1055 aa17.2■□□□□ 0.34
LINC00028-201ENST00000435497 IQSEC3Q9UPP2 1182 aaPredicted RBP17.2■□□□□ 0.34
LINC00028-201ENST00000435497 NBPF7P0C2Y1 421 aaPredicted RBP17.19■□□□□ 0.34
LINC00028-201ENST00000435497 HABP4Q5JVS0 413 aaKnown RBP17.19■□□□□ 0.34
LINC00028-201ENST00000435497 FAM43AQ8N2R8 423 aa17.19■□□□□ 0.34
LINC00028-201ENST00000435497 GCC1Q96CN9 775 aa17.19■□□□□ 0.34
LINC00028-201ENST00000435497 CCL15-CCL14A0A0B4J2E2 113 aa17.18■□□□□ 0.34
LINC00028-201ENST00000435497 CCL15Q16663 113 aa17.18■□□□□ 0.34
LINC00028-201ENST00000435497 LRRC24Q50LG9 513 aa17.18■□□□□ 0.34
LINC00028-201ENST00000435497 UTYO14607 1347 aa17.18■□□□□ 0.34
LINC00028-201ENST00000435497 GTF2A2P52657 109 aa17.17■□□□□ 0.34
LINC00028-201ENST00000435497 CACNB3P54284 484 aa17.17■□□□□ 0.34
LINC00028-201ENST00000435497 HDLBPQ00341 1268 aaKnown RBP17.17■□□□□ 0.34
LINC00028-201ENST00000435497 TAF1CQ15572 869 aaPredicted RBP17.17■□□□□ 0.34
LINC00028-201ENST00000435497 ARAP2Q8WZ64 1704 aa17.17■□□□□ 0.34
LINC00028-201ENST00000435497 OTUD5Q96G74 571 aa17.17■□□□□ 0.34
LINC00028-201ENST00000435497 ZNF333Q96JL9 665 aa17.17■□□□□ 0.34
LINC00028-201ENST00000435497 ZFYVE28Q9HCC9 887 aa17.17■□□□□ 0.34
LINC00028-201ENST00000435497 MROH5Q6ZUA9 1318 aa17.17■□□□□ 0.34
LINC00028-201ENST00000435497 TNNI2P48788 182 aa17.16■□□□□ 0.34
LINC00028-201ENST00000435497 CHAF1AQ13111 956 aaPredicted RBP17.16■□□□□ 0.34
LINC00028-201ENST00000435497 RABL6Q3YEC7 729 aaPredicted RBP17.16■□□□□ 0.34
LINC00028-201ENST00000435497 ANKRD44Q8N8A2 993 aa17.16■□□□□ 0.34
LINC00028-201ENST00000435497 VGLL2Q8N8G2 317 aa17.16■□□□□ 0.34
LINC00028-201ENST00000435497 BICC1Q9H694 974 aaKnown RBP17.16■□□□□ 0.34
LINC00028-201ENST00000435497 PTCH2Q9Y6C5 1203 aa17.16■□□□□ 0.34
LINC00028-201ENST00000435497 SPDYE5A6NIY4 337 aa17.15■□□□□ 0.34
LINC00028-201ENST00000435497 MRIQ9BWK5 157 aa17.15■□□□□ 0.34
LINC00028-201ENST00000435497 CSADQ9Y600 493 aa17.15■□□□□ 0.34
LINC00028-201ENST00000435497 SNCAIPQ9Y6H5 919 aa17.15■□□□□ 0.34
LINC00028-201ENST00000435497 CEP290O15078 2479 aa17.14■□□□□ 0.34
LINC00028-201ENST00000435497 BCAMP50895 628 aa17.14■□□□□ 0.33
LINC00028-201ENST00000435497 APOBEC3HQ6NTF7 200 aaKnown RBP17.14■□□□□ 0.33
LINC00028-201ENST00000435497 VPS37DQ86XT2 251 aa17.14■□□□□ 0.33
LINC00028-201ENST00000435497 TBC1D22AQ8WUA7 517 aa17.14■□□□□ 0.33
LINC00028-201ENST00000435497 ZKSCAN4Q969J2 545 aaPredicted RBP17.14■□□□□ 0.33
LINC00028-201ENST00000435497 TMEM106CQ9BVX2 250 aa17.14■□□□□ 0.33
LINC00028-201ENST00000435497 ZSWIM8A7E2V4 1837 aa17.13■□□□□ 0.33
LINC00028-201ENST00000435497 BTBD19C9JJ37 291 aa17.13■□□□□ 0.33
LINC00028-201ENST00000435497 IRF6O14896 467 aa17.13■□□□□ 0.33
LINC00028-201ENST00000435497 PDE8BO95263 885 aa17.13■□□□□ 0.33
LINC00028-201ENST00000435497 METTL24Q5JXM2 366 aa17.13■□□□□ 0.33
LINC00028-201ENST00000435497 ERO1BQ86YB8 467 aa17.13■□□□□ 0.33
LINC00028-201ENST00000435497 KLHDC4Q8TBB5 520 aa17.13■□□□□ 0.33
LINC00028-201ENST00000435497 TEKT1Q969V4 418 aa17.13■□□□□ 0.33
LINC00028-201ENST00000435497 ZDHHC15Q96MV8 337 aa17.13■□□□□ 0.33
LINC00028-201ENST00000435497 ARHGAP39Q9C0H5 1083 aa17.13■□□□□ 0.33
LINC00028-201ENST00000435497 TLR2O60603 784 aa17.12■□□□□ 0.33
LINC00028-201ENST00000435497 ARHGEF6Q15052 776 aa17.12■□□□□ 0.33
LINC00028-201ENST00000435497 SLC9C1Q4G0N8 1177 aa17.12■□□□□ 0.33
LINC00028-201ENST00000435497 CAVIN4Q5BKX8 364 aa17.12■□□□□ 0.33
LINC00028-201ENST00000435497 FKBP1CQ5VVH2 108 aa17.12■□□□□ 0.33
LINC00028-201ENST00000435497 FAM83AQ86UY5 434 aa17.12■□□□□ 0.33
LINC00028-201ENST00000435497 WRNIP1Q96S55 665 aa17.12■□□□□ 0.33
LINC00028-201ENST00000435497 FRAT2O75474 233 aaPredicted RBP17.11■□□□□ 0.33
LINC00028-201ENST00000435497 CETPP11597 493 aa17.11■□□□□ 0.33
LINC00028-201ENST00000435497 FGFR2P21802 821 aa17.11■□□□□ 0.33
LINC00028-201ENST00000435497 NBPF11Q86T75 865 aa17.11■□□□□ 0.33
LINC00028-201ENST00000435497 MRPL50Q8N5N7 158 aaKnown RBP17.11■□□□□ 0.33
LINC00028-201ENST00000435497 MYCP01106 439 aaPredicted RBP17.1■□□□□ 0.33
LINC00028-201ENST00000435497 LACTBP83111 547 aaPredicted RBP17.1■□□□□ 0.33
LINC00028-201ENST00000435497 SNAPC2Q13487 334 aa17.1■□□□□ 0.33
LINC00028-201ENST00000435497 HHIPL2Q6UWX4 724 aa17.1■□□□□ 0.33
LINC00028-201ENST00000435497 SH3TC2Q8TF17 1288 aa17.1■□□□□ 0.33
LINC00028-201ENST00000435497 ZCCHC17Q9NP64 241 aaKnown RBP17.1■□□□□ 0.33
LINC00028-201ENST00000435497 SUGT1Q9Y2Z0 365 aa17.1■□□□□ 0.33
LINC00028-201ENST00000435497 CTGFP29279 349 aa17.09■□□□□ 0.33
LINC00028-201ENST00000435497 INPP5BP32019 993 aa17.09■□□□□ 0.33
LINC00028-201ENST00000435497 PPIL2Q13356 520 aa17.09■□□□□ 0.33
LINC00028-201ENST00000435497 SLC4A8Q2Y0W8 1093 aa17.09■□□□□ 0.33
LINC00028-201ENST00000435497 C17orf99Q6UX52 265 aa17.09■□□□□ 0.33
LINC00028-201ENST00000435497 MIGA2Q7L4E1 593 aa17.09■□□□□ 0.33
LINC00028-201ENST00000435497 USP44Q9H0E7 712 aa17.09■□□□□ 0.33
LINC00028-201ENST00000435497 ZNF521Q96K83 1311 aa17.08■□□□□ 0.32
LINC00028-201ENST00000435497 ANP32CO43423 234 aa17.08■□□□□ 0.32
LINC00028-201ENST00000435497 RFX5P48382 616 aaPredicted RBP17.08■□□□□ 0.32
LINC00028-201ENST00000435497 FXR1P51114 621 aaKnown RBP eCLIP17.08■□□□□ 0.32
LINC00028-201ENST00000435497 FAM9BQ8IZU0 186 aa17.08■□□□□ 0.32
LINC00028-201ENST00000435497 TMOD2Q9NZR1 351 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms