RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 TEKT1Q969V4 418 aa20.04■□□□□ 0.8
SMPD4-207ENST00000435455 PRMT6Q96LA8 375 aaPredicted RBP20.04■□□□□ 0.8
SMPD4-207ENST00000435455 PCDHAC2Q9Y5I4 1007 aa20.04■□□□□ 0.8
SMPD4-207ENST00000435455 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.04■□□□□ 0.8
SMPD4-207ENST00000435455 SALL1Q9NSC2 1324 aa20.03■□□□□ 0.8
SMPD4-207ENST00000435455 HSP90AB4PQ58FF6 505 aa20.03■□□□□ 0.8
SMPD4-207ENST00000435455 PAXIP1Q6ZW49 1069 aaPredicted RBP20.03■□□□□ 0.8
SMPD4-207ENST00000435455 ZGPATQ8N5A5 531 aaKnown RBP20.03■□□□□ 0.8
SMPD4-207ENST00000435455 CAPNS2Q96L46 248 aa20.03■□□□□ 0.8
SMPD4-207ENST00000435455 NF2P35240 595 aa20.02■□□□□ 0.8
SMPD4-207ENST00000435455 HUNKP57058 714 aa20.02■□□□□ 0.8
SMPD4-207ENST00000435455 FKBP1BP68106 108 aa20.02■□□□□ 0.8
SMPD4-207ENST00000435455 TNNI3KQ59H18 835 aa20.02■□□□□ 0.8
SMPD4-207ENST00000435455 ERC1Q8IUD2 1116 aa20.02■□□□□ 0.8
SMPD4-207ENST00000435455 SCAF8Q9UPN6 1271 aaKnown RBP20.02■□□□□ 0.8
SMPD4-207ENST00000435455 PPP2R3BQ9Y5P8 575 aa20.02■□□□□ 0.8
SMPD4-207ENST00000435455 FPGT-TNNI3KV9GXZ4 949 aa20.02■□□□□ 0.8
SMPD4-207ENST00000435455 PAPPA2Q9BXP8 1791 aa20.02■□□□□ 0.8
SMPD4-207ENST00000435455 WDR33Q9C0J8 1336 aaKnown RBP20.02■□□□□ 0.79
SMPD4-207ENST00000435455 CLRN2A0PK11 232 aa20.01■□□□□ 0.79
SMPD4-207ENST00000435455 LDHBP07195 334 aaKnown RBP20.01■□□□□ 0.79
SMPD4-207ENST00000435455 TNFAIP1Q13829 316 aa20.01■□□□□ 0.79
SMPD4-207ENST00000435455 RASGRF1Q13972 1273 aa20.01■□□□□ 0.79
SMPD4-207ENST00000435455 SPDYE2Q495Y8 402 aa20.01■□□□□ 0.79
SMPD4-207ENST00000435455 HHIPL2Q6UWX4 724 aa20.01■□□□□ 0.79
SMPD4-207ENST00000435455 DEFB129Q9H1M3 183 aa20.01■□□□□ 0.79
SMPD4-207ENST00000435455 VEZTQ9HBM0 779 aa20.01■□□□□ 0.79
SMPD4-207ENST00000435455 UQCRFS1P1P0C7P4 283 aa20■□□□□ 0.79
SMPD4-207ENST00000435455 CYP4F22Q6NT55 531 aa20■□□□□ 0.79
SMPD4-207ENST00000435455 ZDHHC15Q96MV8 337 aa20■□□□□ 0.79
SMPD4-207ENST00000435455 TDRD3Q9H7E2 651 aaKnown RBP20■□□□□ 0.79
SMPD4-207ENST00000435455 ZNF70Q9UC06 446 aaPredicted RBP20■□□□□ 0.79
SMPD4-207ENST00000435455 ARID4AP29374 1257 aaPredicted RBP19.99■□□□□ 0.79
SMPD4-207ENST00000435455 PRDX5P30044 214 aa19.99■□□□□ 0.79
SMPD4-207ENST00000435455 RRP1P56182 461 aaKnown RBP19.99■□□□□ 0.79
SMPD4-207ENST00000435455 PRAMEF18Q5VWM3 479 aa19.99■□□□□ 0.79
SMPD4-207ENST00000435455 SPTY2D1Q68D10 685 aaPredicted RBP19.99■□□□□ 0.79
SMPD4-207ENST00000435455 EXOC6BQ9Y2D4 811 aa19.99■□□□□ 0.79
SMPD4-207ENST00000435455 AOX1Q06278 1338 aa19.99■□□□□ 0.79
SMPD4-207ENST00000435455 THSD7BQ9C0I4 1608 aa19.98■□□□□ 0.79
SMPD4-207ENST00000435455 GRM1Q13255 1194 aa19.97■□□□□ 0.79
SMPD4-207ENST00000435455 CCDC158Q5M9N0 1113 aa19.97■□□□□ 0.79
SMPD4-207ENST00000435455 RGMBQ6NW40 437 aa19.97■□□□□ 0.79
SMPD4-207ENST00000435455 SIRT2Q8IXJ6 389 aa19.97■□□□□ 0.79
SMPD4-207ENST00000435455 DBNDD2Q9BQY9 259 aa19.97■□□□□ 0.79
SMPD4-207ENST00000435455 TMOD2Q9NZR1 351 aa19.97■□□□□ 0.79
SMPD4-207ENST00000435455 HMG20BQ9P0W2 317 aa19.97■□□□□ 0.79
SMPD4-207ENST00000435455 MYH2Q9UKX2 1941 aa19.97■□□□□ 0.79
SMPD4-207ENST00000435455 MAP2K2P36507 400 aa19.96■□□□□ 0.79
SMPD4-207ENST00000435455 TNNI2P48788 182 aa19.96■□□□□ 0.79
SMPD4-207ENST00000435455 TTLL12Q14166 644 aaPredicted RBP19.96■□□□□ 0.79
SMPD4-207ENST00000435455 RASA3Q14644 834 aa19.96■□□□□ 0.79
SMPD4-207ENST00000435455 SUPT20HL1Q3ZLR7 823 aa19.96■□□□□ 0.79
SMPD4-207ENST00000435455 TTC39AQ5SRH9 613 aa19.96■□□□□ 0.79
SMPD4-207ENST00000435455 SLF2Q8IX21 1173 aa19.96■□□□□ 0.79
SMPD4-207ENST00000435455 SPATA5Q8NB90 893 aa19.96■□□□□ 0.79
SMPD4-207ENST00000435455 ABCF2Q9UG63 623 aa19.96■□□□□ 0.79
SMPD4-207ENST00000435455 HSPA1AP0DMV8 641 aaKnown RBP19.95■□□□□ 0.78
SMPD4-207ENST00000435455 HSPA1BP0DMV9 641 aaKnown RBP19.95■□□□□ 0.78
SMPD4-207ENST00000435455 ZNF157P51786 506 aaPredicted RBP19.95■□□□□ 0.78
SMPD4-207ENST00000435455 MAP2K1Q02750 393 aaPredicted RBP19.95■□□□□ 0.78
SMPD4-207ENST00000435455 FKBP1CQ5VVH2 108 aa19.95■□□□□ 0.78
SMPD4-207ENST00000435455 APOBEC3HQ6NTF7 200 aaKnown RBP19.95■□□□□ 0.78
SMPD4-207ENST00000435455 ARMC9Q7Z3E5 817 aa19.95■□□□□ 0.78
SMPD4-207ENST00000435455 DZIP1Q86YF9 867 aaKnown RBP19.95■□□□□ 0.78
SMPD4-207ENST00000435455 CCDC102AQ96A19 550 aa19.95■□□□□ 0.78
SMPD4-207ENST00000435455 KIF1BPQ96EK5 621 aa19.95■□□□□ 0.78
SMPD4-207ENST00000435455 DAGLAQ9Y4D2 1042 aa19.95■□□□□ 0.78
SMPD4-207ENST00000435455 AKAP11Q9UKA4 1901 aa19.94■□□□□ 0.78
SMPD4-207ENST00000435455 RAB11FIP3O75154 756 aa19.94■□□□□ 0.78
SMPD4-207ENST00000435455 MCAMP43121 646 aa19.94■□□□□ 0.78
SMPD4-207ENST00000435455 NOGQ13253 232 aa19.94■□□□□ 0.78
SMPD4-207ENST00000435455 DIXDC1Q155Q3 683 aa19.94■□□□□ 0.78
SMPD4-207ENST00000435455 ERICH6Q7L0X2 663 aa19.94■□□□□ 0.78
SMPD4-207ENST00000435455 RHPN1Q8TCX5 695 aa19.94■□□□□ 0.78
SMPD4-207ENST00000435455 EAF2Q96CJ1 260 aaPredicted RBP19.94■□□□□ 0.78
SMPD4-207ENST00000435455 ZNF512BQ96KM6 892 aaPredicted RBP19.94■□□□□ 0.78
SMPD4-207ENST00000435455 DBNLQ9UJU6 430 aaKnown RBP19.94■□□□□ 0.78
SMPD4-207ENST00000435455 TCP10L2B9ZVM9 353 aa19.93■□□□□ 0.78
SMPD4-207ENST00000435455 PPP1R12BO60237 982 aaPredicted RBP19.93■□□□□ 0.78
SMPD4-207ENST00000435455 CCDC8Q9H0W5 538 aaPredicted RBP19.93■□□□□ 0.78
SMPD4-207ENST00000435455 UBE2Q2LH0YL09 131 aa19.92■□□□□ 0.78
SMPD4-207ENST00000435455 AOC2O75106 756 aa19.92■□□□□ 0.78
SMPD4-207ENST00000435455 NBPF12Q5TAG4 269 aaPredicted RBP19.92■□□□□ 0.78
SMPD4-207ENST00000435455 PI16Q6UXB8 463 aa19.92■□□□□ 0.78
SMPD4-207ENST00000435455 MOB2Q70IA6 237 aa19.92■□□□□ 0.78
SMPD4-207ENST00000435455 FAM83AQ86UY5 434 aa19.92■□□□□ 0.78
SMPD4-207ENST00000435455 AACSQ86V21 672 aa19.92■□□□□ 0.78
SMPD4-207ENST00000435455 CLASRPQ8N2M8 674 aaKnown RBP19.92■□□□□ 0.78
SMPD4-207ENST00000435455 AIDAQ96BJ3 306 aa19.92■□□□□ 0.78
SMPD4-207ENST00000435455 WBP1LQ9NX94 342 aa19.92■□□□□ 0.78
SMPD4-207ENST00000435455 TLR7Q9NYK1 1049 aaKnown RBP19.92■□□□□ 0.78
SMPD4-207ENST00000435455 SLC10A3P09131 477 aa19.91■□□□□ 0.78
SMPD4-207ENST00000435455 GSTO1P78417 241 aa19.91■□□□□ 0.78
SMPD4-207ENST00000435455 PRKG1Q13976 671 aa19.91■□□□□ 0.78
SMPD4-207ENST00000435455 FAM163AQ96GL9 167 aaPredicted RBP19.91■□□□□ 0.78
SMPD4-207ENST00000435455 IL1RAPL2Q9NP60 686 aa19.91■□□□□ 0.78
SMPD4-207ENST00000435455 GAKO14976 1311 aa19.91■□□□□ 0.78
SMPD4-207ENST00000435455 SSC5DA1L4H1 1573 aa19.91■□□□□ 0.78
SMPD4-207ENST00000435455 FAM155AB1AL88 458 aaPredicted RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms