RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 RGS19P49795 217 aa17.97■□□□□ 0.47
LINC01006-204ENST00000435354 RARSP54136 660 aaKnown RBP17.97■□□□□ 0.47
LINC01006-204ENST00000435354 SREBF2Q12772 1141 aa17.97■□□□□ 0.47
LINC01006-204ENST00000435354 TBC1D22AQ8WUA7 517 aa17.97■□□□□ 0.47
LINC01006-204ENST00000435354 WNK4Q96J92 1243 aa17.97■□□□□ 0.47
LINC01006-204ENST00000435354 TEPSINQ96N21 525 aa17.97■□□□□ 0.47
LINC01006-204ENST00000435354 API5Q9BZZ5 524 aaKnown RBP17.97■□□□□ 0.47
LINC01006-204ENST00000435354 IFIT1P09914 478 aaKnown RBP17.96■□□□□ 0.47
LINC01006-204ENST00000435354 TNFAIP1Q13829 316 aa17.96■□□□□ 0.47
LINC01006-204ENST00000435354 CTU1Q7Z7A3 348 aaKnown RBP17.96■□□□□ 0.47
LINC01006-204ENST00000435354 ZNF296Q8WUU4 475 aaPredicted RBP17.96■□□□□ 0.47
LINC01006-204ENST00000435354 R3HDMLQ9H3Y0 253 aa17.96■□□□□ 0.47
LINC01006-204ENST00000435354 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.96■□□□□ 0.47
LINC01006-204ENST00000435354 UNCXA6NJT0 531 aa17.95■□□□□ 0.46
LINC01006-204ENST00000435354 TCP10L2B9ZVM9 353 aa17.95■□□□□ 0.46
LINC01006-204ENST00000435354 ZBTB48P10074 688 aaPredicted RBP17.95■□□□□ 0.46
LINC01006-204ENST00000435354 GJA5P36382 358 aa17.95■□□□□ 0.46
LINC01006-204ENST00000435354 HDLBPQ00341 1268 aaKnown RBP17.95■□□□□ 0.46
LINC01006-204ENST00000435354 NOM1Q5C9Z4 860 aaKnown RBP17.95■□□□□ 0.46
LINC01006-204ENST00000435354 LPIN2Q92539 896 aa17.95■□□□□ 0.46
LINC01006-204ENST00000435354 MEIS3Q99687 375 aa17.95■□□□□ 0.46
LINC01006-204ENST00000435354 CFHR5Q9BXR6 569 aa17.95■□□□□ 0.46
LINC01006-204ENST00000435354 SIL1Q9H173 461 aa17.95■□□□□ 0.46
LINC01006-204ENST00000435354 LRRFIP2Q9Y608 721 aaKnown RBP17.95■□□□□ 0.46
LINC01006-204ENST00000435354 MANSC4A6NHS7 340 aaPredicted RBP17.94■□□□□ 0.46
LINC01006-204ENST00000435354 GPR25O00155 361 aa17.94■□□□□ 0.46
LINC01006-204ENST00000435354 CIAO1O76071 339 aa17.94■□□□□ 0.46
LINC01006-204ENST00000435354 SLC5A1P13866 664 aa17.94■□□□□ 0.46
LINC01006-204ENST00000435354 IREB2P48200 963 aaKnown RBP17.94■□□□□ 0.46
LINC01006-204ENST00000435354 TEKT1Q969V4 418 aa17.94■□□□□ 0.46
LINC01006-204ENST00000435354 ZDHHC15Q96MV8 337 aa17.94■□□□□ 0.46
LINC01006-204ENST00000435354 TMEM39BQ9GZU3 492 aa17.94■□□□□ 0.46
LINC01006-204ENST00000435354 CACNB3P54284 484 aa17.93■□□□□ 0.46
LINC01006-204ENST00000435354 IFNL1Q8IU54 200 aa17.93■□□□□ 0.46
LINC01006-204ENST00000435354 ANKRD13AQ8IZ07 590 aa17.93■□□□□ 0.46
LINC01006-204ENST00000435354 MRIQ9BWK5 157 aa17.93■□□□□ 0.46
LINC01006-204ENST00000435354 FBXO3Q9UK99 471 aa17.93■□□□□ 0.46
LINC01006-204ENST00000435354 IGF2BP3O00425 579 aaKnown RBP eCLIP17.92■□□□□ 0.46
LINC01006-204ENST00000435354 ATP2B3Q16720 1220 aa17.92■□□□□ 0.46
LINC01006-204ENST00000435354 INTS3Q68E01 1043 aaKnown RBP17.92■□□□□ 0.46
LINC01006-204ENST00000435354 APOBEC3HQ6NTF7 200 aaKnown RBP17.92■□□□□ 0.46
LINC01006-204ENST00000435354 ARHGAP45Q92619 1136 aa17.92■□□□□ 0.46
LINC01006-204ENST00000435354 PA2G4Q9UQ80 394 aaKnown RBP17.92■□□□□ 0.46
LINC01006-204ENST00000435354 SUGT1Q9Y2Z0 365 aa17.92■□□□□ 0.46
LINC01006-204ENST00000435354 TNNI2P48788 182 aa17.91■□□□□ 0.46
LINC01006-204ENST00000435354 INHBEP58166 350 aa17.91■□□□□ 0.46
LINC01006-204ENST00000435354 MLLT1Q03111 559 aaPredicted RBP17.91■□□□□ 0.46
LINC01006-204ENST00000435354 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.91■□□□□ 0.46
LINC01006-204ENST00000435354 CEP126Q9P2H0 1117 aa17.91■□□□□ 0.46
LINC01006-204ENST00000435354 MAST3O60307 1309 aa17.91■□□□□ 0.46
LINC01006-204ENST00000435354 ALDH1A1P00352 501 aa17.9■□□□□ 0.46
LINC01006-204ENST00000435354 HHIPL2Q6UWX4 724 aa17.9■□□□□ 0.46
LINC01006-204ENST00000435354 WDR66Q8TBY9 1149 aa17.9■□□□□ 0.46
LINC01006-204ENST00000435354 ELP3Q9H9T3 547 aa17.9■□□□□ 0.46
LINC01006-204ENST00000435354 COPRSQ9NQ92 184 aa17.9■□□□□ 0.46
LINC01006-204ENST00000435354 HDAC5Q9UQL6 1122 aa17.9■□□□□ 0.46
LINC01006-204ENST00000435354 FKTNO75072 461 aa17.89■□□□□ 0.45
LINC01006-204ENST00000435354 IL15P40933 162 aaPredicted RBP17.89■□□□□ 0.45
LINC01006-204ENST00000435354 VGLL4Q14135 290 aa17.89■□□□□ 0.45
LINC01006-204ENST00000435354 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.89■□□□□ 0.45
LINC01006-204ENST00000435354 CNKSR2Q8WXI2 1034 aa17.89■□□□□ 0.45
LINC01006-204ENST00000435354 HPS5Q9UPZ3 1129 aa17.89■□□□□ 0.45
LINC01006-204ENST00000435354 TNNQ9UQP3 1299 aa17.89■□□□□ 0.45
LINC01006-204ENST00000435354 TESPA1A2RU30 521 aaPredicted RBP17.88■□□□□ 0.45
LINC01006-204ENST00000435354 TRIM27P14373 513 aa17.88■□□□□ 0.45
LINC01006-204ENST00000435354 PRDX5P30044 214 aa17.88■□□□□ 0.45
LINC01006-204ENST00000435354 PHKA1P46020 1223 aa17.88■□□□□ 0.45
LINC01006-204ENST00000435354 PKN2Q16513 984 aaKnown RBP17.88■□□□□ 0.45
LINC01006-204ENST00000435354 FKBP1CQ5VVH2 108 aa17.88■□□□□ 0.45
LINC01006-204ENST00000435354 FAM83AQ86UY5 434 aa17.88■□□□□ 0.45
LINC01006-204ENST00000435354 OPTNQ96CV9 577 aa17.88■□□□□ 0.45
LINC01006-204ENST00000435354 PTPN18Q99952 460 aa17.88■□□□□ 0.45
LINC01006-204ENST00000435354 BCAR3O75815 825 aa17.87■□□□□ 0.45
LINC01006-204ENST00000435354 ADORA1P30542 326 aa17.87■□□□□ 0.45
LINC01006-204ENST00000435354 SOX10P56693 466 aa17.87■□□□□ 0.45
LINC01006-204ENST00000435354 MAP3K9P80192 1104 aa17.87■□□□□ 0.45
LINC01006-204ENST00000435354 DIXDC1Q155Q3 683 aa17.87■□□□□ 0.45
LINC01006-204ENST00000435354 MS4A4AQ96JQ5 239 aa17.87■□□□□ 0.45
LINC01006-204ENST00000435354 TMOD2Q9NZR1 351 aa17.87■□□□□ 0.45
LINC01006-204ENST00000435354 DAGLAQ9Y4D2 1042 aa17.87■□□□□ 0.45
LINC01006-204ENST00000435354 GNAI3P08754 354 aa17.86■□□□□ 0.45
LINC01006-204ENST00000435354 MTX1Q13505 466 aa17.86■□□□□ 0.45
LINC01006-204ENST00000435354 GNL3LQ9NVN8 582 aaKnown RBP17.86■□□□□ 0.45
LINC01006-204ENST00000435354 SALL1Q9NSC2 1324 aa17.86■□□□□ 0.45
LINC01006-204ENST00000435354 RPAP1Q9BWH6 1393 aaPredicted RBP17.86■□□□□ 0.45
LINC01006-204ENST00000435354 SEMA3EO15041 775 aa17.85■□□□□ 0.45
LINC01006-204ENST00000435354 ZBTB22O15209 634 aa17.85■□□□□ 0.45
LINC01006-204ENST00000435354 SRGAP3O43295 1099 aa17.85■□□□□ 0.45
LINC01006-204ENST00000435354 CRHR2Q13324 411 aa17.85■□□□□ 0.45
LINC01006-204ENST00000435354 CCDC102BQ68D86 513 aa17.85■□□□□ 0.45
LINC01006-204ENST00000435354 ATF7IPQ6VMQ6 1270 aa17.85■□□□□ 0.45
LINC01006-204ENST00000435354 BRI3BPQ8WY22 251 aa17.85■□□□□ 0.45
LINC01006-204ENST00000435354 SNCAIPQ9Y6H5 919 aa17.85■□□□□ 0.45
LINC01006-204ENST00000435354 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.85■□□□□ 0.45
LINC01006-204ENST00000435354 IPO8O15397 1037 aaKnown RBP17.84■□□□□ 0.45
LINC01006-204ENST00000435354 LDHBP07195 334 aaKnown RBP17.84■□□□□ 0.45
LINC01006-204ENST00000435354 TIMM10P62072 90 aa17.84■□□□□ 0.45
LINC01006-204ENST00000435354 CDC42EP5Q6NZY7 148 aa17.84■□□□□ 0.45
LINC01006-204ENST00000435354 FBXO46Q6PJ61 603 aaPredicted RBP17.84■□□□□ 0.45
LINC01006-204ENST00000435354 FRAT1Q92837 279 aaPredicted RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms