RNA–Protein interactions for RNA: ENST00000435067.2

LINC01055-201, Transcript of long intergenic non-protein coding RNA 1055, humanhuman

TSL 3 BASIC

Gene LINC01055, Length 1,721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01055-201ENST00000435067 ZNF384Q8TF68 577 aa12.5□□□□□ -0.41
LINC01055-201ENST00000435067 TBC1D22AQ8WUA7 517 aa12.5□□□□□ -0.41
LINC01055-201ENST00000435067 NSUN4Q96CB9 384 aaKnown RBP12.5□□□□□ -0.41
LINC01055-201ENST00000435067 SCN9AQ15858 1988 aa12.5□□□□□ -0.41
LINC01055-201ENST00000435067 MAST3O60307 1309 aa12.5□□□□□ -0.41
LINC01055-201ENST00000435067 RAD50Q92878 1312 aa12.5□□□□□ -0.41
LINC01055-201ENST00000435067 USP17L3A6NCW0 530 aa12.49□□□□□ -0.41
LINC01055-201ENST00000435067 USP17L4A6NCW7 530 aa12.49□□□□□ -0.41
LINC01055-201ENST00000435067 YBX3P16989 372 aaKnown RBP eCLIP12.49□□□□□ -0.41
LINC01055-201ENST00000435067 NAA16Q6N069 864 aaPredicted RBP12.49□□□□□ -0.41
LINC01055-201ENST00000435067 KIAA1211Q6ZU35 1233 aa12.49□□□□□ -0.41
LINC01055-201ENST00000435067 USP17L1Q7RTZ2 530 aa12.49□□□□□ -0.41
LINC01055-201ENST00000435067 ADGRA1Q86SQ6 560 aa12.49□□□□□ -0.41
LINC01055-201ENST00000435067 DZIP1Q86YF9 867 aaKnown RBP12.49□□□□□ -0.41
LINC01055-201ENST00000435067 CERS5Q8N5B7 392 aa12.49□□□□□ -0.41
LINC01055-201ENST00000435067 LTBP3Q9NS15 1303 aa12.49□□□□□ -0.41
LINC01055-201ENST00000435067 EIF5BO60841 1220 aaKnown RBP12.48□□□□□ -0.41
LINC01055-201ENST00000435067 RAD17O75943 681 aa12.48□□□□□ -0.41
LINC01055-201ENST00000435067 PRELPP51888 382 aa12.48□□□□□ -0.41
LINC01055-201ENST00000435067 PTH1RQ03431 593 aa12.48□□□□□ -0.41
LINC01055-201ENST00000435067 STRIP1Q5VSL9 837 aa12.48□□□□□ -0.41
LINC01055-201ENST00000435067 MIGA1Q8NAN2 632 aa12.48□□□□□ -0.41
LINC01055-201ENST00000435067 JDP2Q8WYK2 163 aa12.48□□□□□ -0.41
LINC01055-201ENST00000435067 USP26Q9BXU7 913 aa12.48□□□□□ -0.41
LINC01055-201ENST00000435067 ZNRF3Q9ULT6 936 aa12.48□□□□□ -0.41
LINC01055-201ENST00000435067 CCDC171Q6TFL3 1326 aa12.48□□□□□ -0.41
LINC01055-201ENST00000435067 CCDC88AQ3V6T2 1871 aa12.48□□□□□ -0.41
LINC01055-201ENST00000435067 F8W031 263 aaPredicted RBP12.48□□□□□ -0.41
LINC01055-201ENST00000435067 DIXDC1Q155Q3 683 aa12.48□□□□□ -0.41
LINC01055-201ENST00000435067 DACT2Q5SW24 774 aa12.48□□□□□ -0.41
LINC01055-201ENST00000435067 LSG1Q9H089 658 aaKnown RBP12.48□□□□□ -0.41
LINC01055-201ENST00000435067 GPAA1O43292 621 aa12.47□□□□□ -0.41
LINC01055-201ENST00000435067 VPS53Q5VIR6 699 aa12.47□□□□□ -0.41
LINC01055-201ENST00000435067 AIDAQ96BJ3 306 aa12.47□□□□□ -0.41
LINC01055-201ENST00000435067 C22orf23Q9BZE7 217 aa12.47□□□□□ -0.41
LINC01055-201ENST00000435067 MBD4O95243 580 aa12.46□□□□□ -0.41
LINC01055-201ENST00000435067 ARMT1Q9H993 441 aa12.46□□□□□ -0.41
LINC01055-201ENST00000435067 MAST2Q6P0Q8 1798 aa12.46□□□□□ -0.42
LINC01055-201ENST00000435067 ZNF646O15015 1829 aaPredicted RBP12.46□□□□□ -0.42
LINC01055-201ENST00000435067 MAGEB6P1A0A0J9YX57 407 aa12.45□□□□□ -0.42
LINC01055-201ENST00000435067 PSMD14O00487 310 aa12.45□□□□□ -0.42
LINC01055-201ENST00000435067 SCNN1DP51172 638 aa12.45□□□□□ -0.42
LINC01055-201ENST00000435067 GSTO1P78417 241 aa12.45□□□□□ -0.42
LINC01055-201ENST00000435067 GPR162Q16538 588 aa12.45□□□□□ -0.42
LINC01055-201ENST00000435067 KIAA0825Q8IV33 1275 aa12.45□□□□□ -0.42
LINC01055-201ENST00000435067 LCORLQ8N3X6 602 aa12.45□□□□□ -0.42
LINC01055-201ENST00000435067 TBC1D32Q96NH3 1257 aa12.45□□□□□ -0.42
LINC01055-201ENST00000435067 TTF2Q9UNY4 1162 aaKnown RBP12.45□□□□□ -0.42
LINC01055-201ENST00000435067 HSPD1P10809 573 aaKnown RBP12.45□□□□□ -0.42
LINC01055-201ENST00000435067 LMNB1P20700 586 aa12.45□□□□□ -0.42
LINC01055-201ENST00000435067 FKBP1AP62942 108 aaKnown RBP12.45□□□□□ -0.42
LINC01055-201ENST00000435067 DYNLL1P63167 89 aaKnown RBP12.45□□□□□ -0.42
LINC01055-201ENST00000435067 CXCL9Q07325 125 aa12.45□□□□□ -0.42
LINC01055-201ENST00000435067 MAP4K1Q92918 833 aa12.45□□□□□ -0.42
LINC01055-201ENST00000435067 STRBPQ96SI9 672 aaKnown RBP12.45□□□□□ -0.42
LINC01055-201ENST00000435067 AATFQ9NY61 560 aaKnown RBP eCLIP12.45□□□□□ -0.42
LINC01055-201ENST00000435067 SUGT1Q9Y2Z0 365 aa12.45□□□□□ -0.42
LINC01055-201ENST00000435067 RBM19Q9Y4C8 960 aaKnown RBP12.45□□□□□ -0.42
LINC01055-201ENST00000435067 MYH2Q9UKX2 1941 aa12.44□□□□□ -0.42
LINC01055-201ENST00000435067 MROH7-TTC4A0A0A0MT08 1334 aa12.44□□□□□ -0.42
LINC01055-201ENST00000435067 IGSF3O75054 1194 aa12.44□□□□□ -0.42
LINC01055-201ENST00000435067 LDHCP07864 332 aa12.44□□□□□ -0.42
LINC01055-201ENST00000435067 VIL1P09327 827 aaKnown RBP12.44□□□□□ -0.42
LINC01055-201ENST00000435067 PSME4Q14997 1843 aa12.44□□□□□ -0.42
LINC01055-201ENST00000435067 RIOK1Q9BRS2 568 aaKnown RBP12.44□□□□□ -0.42
LINC01055-201ENST00000435067 ZBTB12Q9Y330 459 aaPredicted RBP12.44□□□□□ -0.42
LINC01055-201ENST00000435067 FOXP2O15409 715 aa12.43□□□□□ -0.42
LINC01055-201ENST00000435067 PRKAB2O43741 272 aa12.43□□□□□ -0.42
LINC01055-201ENST00000435067 APPP05067 770 aa12.43□□□□□ -0.42
LINC01055-201ENST00000435067 RBM25P49756 843 aaKnown RBP12.43□□□□□ -0.42
LINC01055-201ENST00000435067 CIAPIN1Q6FI81 312 aa12.43□□□□□ -0.42
LINC01055-201ENST00000435067 RSBN1LQ6PCB5 846 aaPredicted RBP12.43□□□□□ -0.42
LINC01055-201ENST00000435067 TMED8Q6PL24 325 aaPredicted RBP12.43□□□□□ -0.42
LINC01055-201ENST00000435067 SLF2Q8IX21 1173 aa12.43□□□□□ -0.42
LINC01055-201ENST00000435067 RBM8AQ9Y5S9 174 aaKnown RBP12.43□□□□□ -0.42
LINC01055-201ENST00000435067 SLC4A4Q9Y6R1 1079 aa12.43□□□□□ -0.42
LINC01055-201ENST00000435067 FZD9O00144 591 aa12.42□□□□□ -0.42
LINC01055-201ENST00000435067 MCCP23508 829 aa12.42□□□□□ -0.42
LINC01055-201ENST00000435067 EIF6P56537 245 aaKnown RBP12.42□□□□□ -0.42
LINC01055-201ENST00000435067 NOL10Q9BSC4 688 aaKnown RBP12.42□□□□□ -0.42
LINC01055-201ENST00000435067 DSCC1Q9BVC3 393 aa12.42□□□□□ -0.42
LINC01055-201ENST00000435067 DAGLAQ9Y4D2 1042 aa12.42□□□□□ -0.42
LINC01055-201ENST00000435067 SBF1O95248 1867 aa12.42□□□□□ -0.42
LINC01055-201ENST00000435067 MYO3BQ8WXR4 1341 aa12.42□□□□□ -0.42
LINC01055-201ENST00000435067 EPB41L2O43491 1005 aaKnown RBP12.42□□□□□ -0.42
LINC01055-201ENST00000435067 BAG3O95817 575 aa12.42□□□□□ -0.42
LINC01055-201ENST00000435067 HSPA4P34932 840 aa12.42□□□□□ -0.42
LINC01055-201ENST00000435067 BTDP43251 543 aa12.42□□□□□ -0.42
LINC01055-201ENST00000435067 TNIP1Q15025 636 aa12.42□□□□□ -0.42
LINC01055-201ENST00000435067 SDR42E1Q8WUS8 393 aa12.42□□□□□ -0.42
LINC01055-201ENST00000435067 TEKT1Q969V4 418 aa12.42□□□□□ -0.42
LINC01055-201ENST00000435067 FAM163AQ96GL9 167 aaPredicted RBP12.42□□□□□ -0.42
LINC01055-201ENST00000435067 RNF181Q9P0P0 153 aa12.42□□□□□ -0.42
LINC01055-201ENST00000435067 PALD1Q9ULE6 856 aa12.42□□□□□ -0.42
LINC01055-201ENST00000435067 ADAMTSL1Q8N6G6 1762 aa12.41□□□□□ -0.42
LINC01055-201ENST00000435067 GAKO14976 1311 aa12.41□□□□□ -0.42
LINC01055-201ENST00000435067 GPR75-ASB3A0A0A6YYF3 556 aa12.41□□□□□ -0.42
LINC01055-201ENST00000435067 GSG1L2A8MUP6 293 aa12.41□□□□□ -0.42
LINC01055-201ENST00000435067 PATL2C9JE40 543 aaKnown RBP12.41□□□□□ -0.42
LINC01055-201ENST00000435067 FGAP02671 866 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms