RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 TXNRD1Q16881 649 aa13.79□□□□□ -0.2
LINC01090-202ENST00000434418 CXXC1Q9P0U4 656 aaPredicted RBP13.79□□□□□ -0.2
LINC01090-202ENST00000434418 CHMP3Q9Y3E7 222 aa13.79□□□□□ -0.2
LINC01090-202ENST00000434418 ATP2B4P23634 1241 aa13.78□□□□□ -0.2
LINC01090-202ENST00000434418 RRS1Q15050 365 aaKnown RBP13.78□□□□□ -0.2
LINC01090-202ENST00000434418 DBN1Q16643 649 aa13.78□□□□□ -0.2
LINC01090-202ENST00000434418 MKNK1Q9BUB5 465 aa13.78□□□□□ -0.2
LINC01090-202ENST00000434418 PHACTR1Q9C0D0 580 aa13.78□□□□□ -0.2
LINC01090-202ENST00000434418 SPON1Q9HCB6 807 aa13.78□□□□□ -0.2
LINC01090-202ENST00000434418 ZDHHC3Q9NYG2 299 aa13.78□□□□□ -0.2
LINC01090-202ENST00000434418 ERBB4Q15303 1308 aa13.78□□□□□ -0.2
LINC01090-202ENST00000434418 FYB1O15117 783 aa13.77□□□□□ -0.21
LINC01090-202ENST00000434418 SCNN1AP37088 669 aa13.77□□□□□ -0.21
LINC01090-202ENST00000434418 CAPN12Q6ZSI9 719 aa13.77□□□□□ -0.21
LINC01090-202ENST00000434418 VWA5B2Q8N398 1253 aa13.77□□□□□ -0.21
LINC01090-202ENST00000434418 STAG2Q8N3U4 1231 aa13.77□□□□□ -0.21
LINC01090-202ENST00000434418 DDX54Q8TDD1 881 aaKnown RBP13.77□□□□□ -0.21
LINC01090-202ENST00000434418 ZNF837Q96EG3 531 aaPredicted RBP13.77□□□□□ -0.21
LINC01090-202ENST00000434418 SHANK3Q9BYB0 1731 aa13.77□□□□□ -0.21
LINC01090-202ENST00000434418 PPP1R1BQ9UD71 204 aaPredicted RBP13.77□□□□□ -0.21
LINC01090-202ENST00000434418 USTQ9Y2C2 406 aa13.77□□□□□ -0.21
LINC01090-202ENST00000434418 KAT6BQ8WYB5 2073 aa13.76□□□□□ -0.21
LINC01090-202ENST00000434418 DOT1LQ8TEK3 1739 aa13.76□□□□□ -0.21
LINC01090-202ENST00000434418 MEGF6O75095 1541 aa13.76□□□□□ -0.21
LINC01090-202ENST00000434418 ZBTB7AO95365 584 aa13.76□□□□□ -0.21
LINC01090-202ENST00000434418 TATP17735 454 aaPredicted RBP13.76□□□□□ -0.21
LINC01090-202ENST00000434418 HIRAP54198 1017 aaPredicted RBP13.76□□□□□ -0.21
LINC01090-202ENST00000434418 NPAS3Q8IXF0 933 aa13.76□□□□□ -0.21
LINC01090-202ENST00000434418 STK32BQ9NY57 414 aa13.76□□□□□ -0.21
LINC01090-202ENST00000434418 PAPPAQ13219 1627 aa13.75□□□□□ -0.21
LINC01090-202ENST00000434418 RTL1A6NKG5 1358 aa13.75□□□□□ -0.21
LINC01090-202ENST00000434418 TRIM22Q8IYM9 498 aa13.75□□□□□ -0.21
LINC01090-202ENST00000434418 USHBP1Q8N6Y0 703 aa13.75□□□□□ -0.21
LINC01090-202ENST00000434418 NSD3Q9BZ95 1437 aa13.74□□□□□ -0.21
LINC01090-202ENST00000434418 ARSJQ5FYB0 599 aaPredicted RBP13.74□□□□□ -0.21
LINC01090-202ENST00000434418 ALDH16A1Q8IZ83 802 aa13.74□□□□□ -0.21
LINC01090-202ENST00000434418 C1orf216Q8TAB5 229 aa13.74□□□□□ -0.21
LINC01090-202ENST00000434418 NUCKS1Q9H1E3 243 aaKnown RBP13.74□□□□□ -0.21
LINC01090-202ENST00000434418 SLC15A2Q16348 729 aa13.73□□□□□ -0.21
LINC01090-202ENST00000434418 GPR161Q8N6U8 529 aaKnown RBP13.73□□□□□ -0.21
LINC01090-202ENST00000434418 C7orf43Q8WVR3 580 aa13.73□□□□□ -0.21
LINC01090-202ENST00000434418 ZIC5Q96T25 663 aa13.73□□□□□ -0.21
LINC01090-202ENST00000434418 CRISPLD1Q9H336 500 aa13.73□□□□□ -0.21
LINC01090-202ENST00000434418 A0A1W2PNR3 127 aa13.72□□□□□ -0.21
LINC01090-202ENST00000434418 NBPF6Q5VWK0 638 aa13.72□□□□□ -0.21
LINC01090-202ENST00000434418 BICDL1Q6ZP65 573 aa13.72□□□□□ -0.21
LINC01090-202ENST00000434418 PGBD3Q8N328 593 aa13.72□□□□□ -0.21
LINC01090-202ENST00000434418 GTPBP3Q969Y2 492 aaKnown RBP13.72□□□□□ -0.21
LINC01090-202ENST00000434418 SYTL4Q96C24 671 aaPredicted RBP13.72□□□□□ -0.21
LINC01090-202ENST00000434418 NBPF4Q96M43 638 aa13.72□□□□□ -0.21
LINC01090-202ENST00000434418 POLR3GLQ9BT43 218 aa13.72□□□□□ -0.21
LINC01090-202ENST00000434418 SMG6Q86US8 1419 aaKnown RBP13.72□□□□□ -0.21
LINC01090-202ENST00000434418 GPR25O00155 361 aa13.71□□□□□ -0.21
LINC01090-202ENST00000434418 WFS1O76024 890 aa13.71□□□□□ -0.21
LINC01090-202ENST00000434418 HSP90AB2PQ58FF8 381 aa13.71□□□□□ -0.21
LINC01090-202ENST00000434418 RHPN1Q8TCX5 695 aa13.71□□□□□ -0.21
LINC01090-202ENST00000434418 SLC16A10Q8TF71 515 aa13.71□□□□□ -0.21
LINC01090-202ENST00000434418 NANOS1Q8WY41 292 aaKnown RBP13.71□□□□□ -0.21
LINC01090-202ENST00000434418 VTI1AQ96AJ9 217 aa13.71□□□□□ -0.21
LINC01090-202ENST00000434418 LRRC4BQ9NT99 713 aa13.71□□□□□ -0.21
LINC01090-202ENST00000434418 H7C1W4 665 aa13.7□□□□□ -0.22
LINC01090-202ENST00000434418 VSIG8P0DPA2 414 aa13.7□□□□□ -0.22
LINC01090-202ENST00000434418 SSFA2P28290 1259 aa13.7□□□□□ -0.22
LINC01090-202ENST00000434418 KCNQ4P56696 695 aa13.7□□□□□ -0.22
LINC01090-202ENST00000434418 UBAP2LQ14157 1087 aaKnown RBP13.7□□□□□ -0.22
LINC01090-202ENST00000434418 ZNF827Q17R98 1081 aa13.7□□□□□ -0.22
LINC01090-202ENST00000434418 PHLDB3Q6NSJ2 640 aa13.7□□□□□ -0.22
LINC01090-202ENST00000434418 ZCRB1Q8TBF4 217 aaKnown RBP13.7□□□□□ -0.22
LINC01090-202ENST00000434418 HSH2DQ96JZ2 352 aa13.7□□□□□ -0.22
LINC01090-202ENST00000434418 INSRP06213 1382 aa13.7□□□□□ -0.22
LINC01090-202ENST00000434418 FLT4P35916 1363 aa13.7□□□□□ -0.22
LINC01090-202ENST00000434418 CLSPNQ9HAW4 1339 aa13.69□□□□□ -0.22
LINC01090-202ENST00000434418 SV2AQ7L0J3 742 aa13.69□□□□□ -0.22
LINC01090-202ENST00000434418 NSD2O96028 1365 aa13.69□□□□□ -0.22
LINC01090-202ENST00000434418 EFHC2Q5JST6 749 aa13.68□□□□□ -0.22
LINC01090-202ENST00000434418 LCE2AQ5TA79 106 aaPredicted RBP13.68□□□□□ -0.22
LINC01090-202ENST00000434418 C1orf53Q5VUE5 145 aa13.68□□□□□ -0.22
LINC01090-202ENST00000434418 RAPGEF4Q8WZA2 1011 aa13.68□□□□□ -0.22
LINC01090-202ENST00000434418 TUBGCP6Q96RT7 1819 aa13.68□□□□□ -0.22
LINC01090-202ENST00000434418 ANKRD26Q9UPS8 1709 aa13.67□□□□□ -0.22
LINC01090-202ENST00000434418 PPM1GO15355 546 aaPredicted RBP13.67□□□□□ -0.22
LINC01090-202ENST00000434418 TREML4Q6UXN2 200 aa13.67□□□□□ -0.22
LINC01090-202ENST00000434418 LRRC69Q6ZNQ3 347 aa13.67□□□□□ -0.22
LINC01090-202ENST00000434418 IRF7Q92985 503 aa13.67□□□□□ -0.22
LINC01090-202ENST00000434418 SAP130Q9H0E3 1048 aa13.67□□□□□ -0.22
LINC01090-202ENST00000434418 SEPT3Q9UH03 358 aa13.67□□□□□ -0.22
LINC01090-202ENST00000434418 LY75O60449 1722 aa13.67□□□□□ -0.22
LINC01090-202ENST00000434418 NAA30Q147X3 362 aaPredicted RBP13.66□□□□□ -0.22
LINC01090-202ENST00000434418 RTN1Q16799 776 aa13.66□□□□□ -0.22
LINC01090-202ENST00000434418 ZNF280CQ8ND82 737 aa13.66□□□□□ -0.22
LINC01090-202ENST00000434418 MTFR1LQ9H019 292 aa13.66□□□□□ -0.22
LINC01090-202ENST00000434418 CCER1Q8TC90 406 aaPredicted RBP13.65□□□□□ -0.22
LINC01090-202ENST00000434418 KLK14Q9P0G3 267 aa13.65□□□□□ -0.22
LINC01090-202ENST00000434418 LRFN2Q9ULH4 789 aa13.65□□□□□ -0.22
LINC01090-202ENST00000434418 CGNL1Q0VF96 1302 aa13.64□□□□□ -0.23
LINC01090-202ENST00000434418 QSER1Q2KHR3 1735 aa13.64□□□□□ -0.23
LINC01090-202ENST00000434418 TOGARAM1Q9Y4F4 1720 aa13.64□□□□□ -0.23
LINC01090-202ENST00000434418 MAP2P11137 1827 aaKnown RBP13.64□□□□□ -0.23
LINC01090-202ENST00000434418 KIF24Q5T7B8 1368 aa13.64□□□□□ -0.23
LINC01090-202ENST00000434418 HSPA5P11021 654 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms