RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 NASPP49321 788 aaPredicted RBP8.98□□□□□ -0.97
USP54-206ENST00000433394 FAAP100Q0VG06 881 aa8.98□□□□□ -0.97
USP54-206ENST00000433394 GAS6Q14393 721 aa8.98□□□□□ -0.97
USP54-206ENST00000433394 CWF19L2Q2TBE0 894 aaKnown RBP8.98□□□□□ -0.97
USP54-206ENST00000433394 SCARA3Q6AZY7 606 aa8.98□□□□□ -0.97
USP54-206ENST00000433394 FBXL19Q6PCT2 694 aa8.98□□□□□ -0.97
USP54-206ENST00000433394 MCF2L2Q86YR7 1114 aa8.98□□□□□ -0.97
USP54-206ENST00000433394 PMFBP1Q8TBY8 1022 aa8.98□□□□□ -0.97
USP54-206ENST00000433394 LILRB5O75023 590 aa8.97□□□□□ -0.97
USP54-206ENST00000433394 FGRP09769 529 aa8.97□□□□□ -0.97
USP54-206ENST00000433394 ESRRAP11474 423 aaPredicted RBP8.97□□□□□ -0.97
USP54-206ENST00000433394 ARNTP27540 789 aa8.97□□□□□ -0.97
USP54-206ENST00000433394 FCHSD1Q86WN1 690 aa8.97□□□□□ -0.97
USP54-206ENST00000433394 NUDT8Q8WV74 236 aa8.97□□□□□ -0.97
USP54-206ENST00000433394 JARID2Q92833 1246 aaPredicted RBP8.97□□□□□ -0.97
USP54-206ENST00000433394 KCNQ5Q9NR82 932 aa8.97□□□□□ -0.97
USP54-206ENST00000433394 NAGPAQ9UK23 515 aa8.97□□□□□ -0.97
USP54-206ENST00000433394 PPME1Q9Y570 386 aa8.97□□□□□ -0.97
USP54-206ENST00000433394 H3BM21 787 aa8.96□□□□□ -0.98
USP54-206ENST00000433394 U2SURPO15042 1029 aaKnown RBP8.96□□□□□ -0.98
USP54-206ENST00000433394 CYP11A1P05108 521 aa8.96□□□□□ -0.98
USP54-206ENST00000433394 TFE3P19532 575 aaPredicted RBP8.96□□□□□ -0.98
USP54-206ENST00000433394 SRSF11Q05519 484 aaKnown RBP8.96□□□□□ -0.98
USP54-206ENST00000433394 HP1BP3Q5SSJ5 553 aaPredicted RBP8.96□□□□□ -0.98
USP54-206ENST00000433394 FAM196AQ6ZSG2 479 aa8.96□□□□□ -0.98
USP54-206ENST00000433394 DPH6Q7L8W6 267 aa8.96□□□□□ -0.98
USP54-206ENST00000433394 VN1R5Q7Z5H4 357 aa8.96□□□□□ -0.98
USP54-206ENST00000433394 IL22RA1Q8N6P7 574 aa8.96□□□□□ -0.98
USP54-206ENST00000433394 DCAF11Q8TEB1 546 aa8.96□□□□□ -0.98
USP54-206ENST00000433394 SLC7A3Q8WY07 619 aa8.96□□□□□ -0.98
USP54-206ENST00000433394 WNT8BQ93098 351 aa8.96□□□□□ -0.98
USP54-206ENST00000433394 EAF1Q96JC9 268 aaPredicted RBP8.96□□□□□ -0.98
USP54-206ENST00000433394 CRBNQ96SW2 442 aa8.96□□□□□ -0.98
USP54-206ENST00000433394 COL25A1Q9BXS0 654 aaPredicted RBP8.96□□□□□ -0.98
USP54-206ENST00000433394 SOX17Q9H6I2 414 aaPredicted RBP8.96□□□□□ -0.98
USP54-206ENST00000433394 SH2B1Q9NRF2 756 aaPredicted RBP8.96□□□□□ -0.98
USP54-206ENST00000433394 KLF15Q9UIH9 416 aa8.96□□□□□ -0.98
USP54-206ENST00000433394 PAGE1O75459 146 aa8.95□□□□□ -0.98
USP54-206ENST00000433394 MCM4P33991 863 aa8.95□□□□□ -0.98
USP54-206ENST00000433394 ZNF165P49910 485 aa8.95□□□□□ -0.98
USP54-206ENST00000433394 PIP4K2BP78356 416 aa8.95□□□□□ -0.98
USP54-206ENST00000433394 GSTM4Q03013 218 aa8.95□□□□□ -0.98
USP54-206ENST00000433394 C19orf57Q0VDD7 668 aa8.95□□□□□ -0.98
USP54-206ENST00000433394 MPP2Q14168 576 aa8.95□□□□□ -0.98
USP54-206ENST00000433394 WFDC8Q8IUA0 241 aa8.95□□□□□ -0.98
USP54-206ENST00000433394 GATAD2BQ8WXI9 593 aa8.95□□□□□ -0.98
USP54-206ENST00000433394 CORO1BQ9BR76 489 aa8.95□□□□□ -0.98
USP54-206ENST00000433394 UBP1Q9NZI7 540 aa8.95□□□□□ -0.98
USP54-206ENST00000433394 GREM1O60565 184 aa8.94□□□□□ -0.98
USP54-206ENST00000433394 WFS1O76024 890 aa8.94□□□□□ -0.98
USP54-206ENST00000433394 EPXP11678 715 aa8.94□□□□□ -0.98
USP54-206ENST00000433394 RBL2Q08999 1139 aa8.94□□□□□ -0.98
USP54-206ENST00000433394 ZNF423Q2M1K9 1284 aa8.94□□□□□ -0.98
USP54-206ENST00000433394 IRF7Q92985 503 aa8.94□□□□□ -0.98
USP54-206ENST00000433394 ACSBG1Q96GR2 724 aa8.94□□□□□ -0.98
USP54-206ENST00000433394 FERD3LQ96RJ6 166 aa8.94□□□□□ -0.98
USP54-206ENST00000433394 GINM1Q9NU53 330 aa8.94□□□□□ -0.98
USP54-206ENST00000433394 VSIG8P0DPA2 414 aa8.93□□□□□ -0.98
USP54-206ENST00000433394 EPHA1P21709 976 aa8.93□□□□□ -0.98
USP54-206ENST00000433394 AMPD1P23109 780 aa8.93□□□□□ -0.98
USP54-206ENST00000433394 CDC25BP30305 580 aa8.93□□□□□ -0.98
USP54-206ENST00000433394 SOX9P48436 509 aa8.93□□□□□ -0.98
USP54-206ENST00000433394 SEZ6Q53EL9 994 aa8.93□□□□□ -0.98
USP54-206ENST00000433394 NBPF6Q5VWK0 638 aa8.93□□□□□ -0.98
USP54-206ENST00000433394 NOP9Q86U38 636 aaKnown RBP8.93□□□□□ -0.98
USP54-206ENST00000433394 KCNB2Q92953 911 aa8.93□□□□□ -0.98
USP54-206ENST00000433394 NBPF4Q96M43 638 aa8.93□□□□□ -0.98
USP54-206ENST00000433394 SRRTQ9BXP5 876 aaKnown RBP8.93□□□□□ -0.98
USP54-206ENST00000433394 TRIM55Q9BYV6 548 aa8.93□□□□□ -0.98
USP54-206ENST00000433394 OSGEPQ9NPF4 335 aa8.93□□□□□ -0.98
USP54-206ENST00000433394 TRIM37O94972 964 aa8.92□□□□□ -0.98
USP54-206ENST00000433394 IMPDH2P12268 514 aa8.92□□□□□ -0.98
USP54-206ENST00000433394 BMP6P22004 513 aa8.92□□□□□ -0.98
USP54-206ENST00000433394 FBXW10Q5XX13 1052 aa8.92□□□□□ -0.98
USP54-206ENST00000433394 MAP4K3Q8IVH8 894 aa8.92□□□□□ -0.98
USP54-206ENST00000433394 LRRC3Q9BY71 257 aa8.92□□□□□ -0.98
USP54-206ENST00000433394 LNPKQ9C0E8 428 aa8.92□□□□□ -0.98
USP54-206ENST00000433394 SOX1O00570 391 aaPredicted RBP8.91□□□□□ -0.98
USP54-206ENST00000433394 TLR3O15455 904 aaKnown RBP8.91□□□□□ -0.98
USP54-206ENST00000433394 F13A1P00488 732 aa8.91□□□□□ -0.98
USP54-206ENST00000433394 GSTP1P09211 210 aaKnown RBP8.91□□□□□ -0.98
USP54-206ENST00000433394 GARTP22102 1010 aa8.91□□□□□ -0.98
USP54-206ENST00000433394 MLECQ14165 292 aa8.91□□□□□ -0.98
USP54-206ENST00000433394 NFE2L2Q16236 605 aa8.91□□□□□ -0.98
USP54-206ENST00000433394 TNNI3KQ59H18 835 aa8.91□□□□□ -0.98
USP54-206ENST00000433394 MAP1SQ66K74 1059 aaPredicted RBP8.91□□□□□ -0.98
USP54-206ENST00000433394 BNC2Q6ZN30 1099 aaPredicted RBP8.91□□□□□ -0.98
USP54-206ENST00000433394 SLITRK4Q8IW52 837 aa8.91□□□□□ -0.98
USP54-206ENST00000433394 GPR161Q8N6U8 529 aaKnown RBP8.91□□□□□ -0.98
USP54-206ENST00000433394 GALNT6Q8NCL4 622 aa8.91□□□□□ -0.98
USP54-206ENST00000433394 EDARADDQ8WWZ3 215 aa8.91□□□□□ -0.98
USP54-206ENST00000433394 MDFIQ99750 246 aa8.91□□□□□ -0.98
USP54-206ENST00000433394 ZSWIM4Q9H7M6 989 aa8.91□□□□□ -0.98
USP54-206ENST00000433394 PCDHB5Q9Y5E4 795 aa8.91□□□□□ -0.98
USP54-206ENST00000433394 LINC01387J3KSC0 135 aa8.9□□□□□ -0.98
USP54-206ENST00000433394 M0R082 166 aa8.9□□□□□ -0.98
USP54-206ENST00000433394 TERTO14746 1132 aaKnown RBP8.9□□□□□ -0.98
USP54-206ENST00000433394 SEPT6Q14141 434 aa8.9□□□□□ -0.98
USP54-206ENST00000433394 POU4F3Q15319 338 aa8.9□□□□□ -0.98
USP54-206ENST00000433394 KLHL23Q8NBE8 558 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms