RNA–Protein interactions for RNA: ENST00000432103.6

RTN1-204, Transcript of reticulon 1, humanhuman

TSL 1 (best)

Gene RTN1, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-204ENST00000432103 NECTIN1Q15223 517 aa16.44■□□□□ 0.22
RTN1-204ENST00000432103 PUS7LQ9H0K6 701 aaKnown RBP16.44■□□□□ 0.22
RTN1-204ENST00000432103 RPAP1Q9BWH6 1393 aaPredicted RBP16.44■□□□□ 0.22
RTN1-204ENST00000432103 ST18O60284 1047 aa16.43■□□□□ 0.22
RTN1-204ENST00000432103 LDHCP07864 332 aa16.43■□□□□ 0.22
RTN1-204ENST00000432103 OLFM4Q6UX06 510 aa16.43■□□□□ 0.22
RTN1-204ENST00000432103 KLHL34Q8N239 644 aa16.43■□□□□ 0.22
RTN1-204ENST00000432103 HSPD1P10809 573 aaKnown RBP16.43■□□□□ 0.22
RTN1-204ENST00000432103 PRKCSHP14314 528 aaPredicted RBP16.43■□□□□ 0.22
RTN1-204ENST00000432103 KIAA2012Q0VF49 1180 aa16.43■□□□□ 0.22
RTN1-204ENST00000432103 CCDC129Q6ZRS4 1044 aa16.43■□□□□ 0.22
RTN1-204ENST00000432103 SLC51AQ86UW1 340 aa16.43■□□□□ 0.22
RTN1-204ENST00000432103 PSMA5P28066 241 aa16.42■□□□□ 0.22
RTN1-204ENST00000432103 KCNB2Q92953 911 aa16.42■□□□□ 0.22
RTN1-204ENST00000432103 NSUN4Q96CB9 384 aaKnown RBP16.42■□□□□ 0.22
RTN1-204ENST00000432103 NOL10Q9BSC4 688 aaKnown RBP16.42■□□□□ 0.22
RTN1-204ENST00000432103 NACAP1Q9BZK3 213 aa16.42■□□□□ 0.22
RTN1-204ENST00000432103 MAGEB6P1A0A0J9YX57 407 aa16.42■□□□□ 0.22
RTN1-204ENST00000432103 MECOMQ03112 1051 aa16.42■□□□□ 0.22
RTN1-204ENST00000432103 NFKBIBQ15653 356 aa16.42■□□□□ 0.22
RTN1-204ENST00000432103 CREB3L3Q68CJ9 461 aa16.42■□□□□ 0.22
RTN1-204ENST00000432103 HSCBQ8IWL3 235 aa16.42■□□□□ 0.22
RTN1-204ENST00000432103 SNX21Q969T3 373 aa16.42■□□□□ 0.22
RTN1-204ENST00000432103 KIF2CQ99661 725 aa16.42■□□□□ 0.22
RTN1-204ENST00000432103 CHGBP05060 677 aa16.41■□□□□ 0.22
RTN1-204ENST00000432103 FKBP1AP62942 108 aaKnown RBP16.41■□□□□ 0.22
RTN1-204ENST00000432103 TSGA10IPQ3SY00 556 aa16.41■□□□□ 0.22
RTN1-204ENST00000432103 MFSD14BQ5SR56 506 aa16.41■□□□□ 0.22
RTN1-204ENST00000432103 SNED1Q8TER0 1413 aa16.41■□□□□ 0.22
RTN1-204ENST00000432103 PATL2C9JE40 543 aaKnown RBP16.4■□□□□ 0.22
RTN1-204ENST00000432103 BAG3O95817 575 aa16.4■□□□□ 0.22
RTN1-204ENST00000432103 TTLL5Q6EMB2 1281 aa16.4■□□□□ 0.22
RTN1-204ENST00000432103 STRBPQ96SI9 672 aaKnown RBP16.4■□□□□ 0.22
RTN1-204ENST00000432103 SNX14Q9Y5W7 946 aa16.4■□□□□ 0.22
RTN1-204ENST00000432103 MAST2Q6P0Q8 1798 aa16.4■□□□□ 0.22
RTN1-204ENST00000432103 PPIP5K2O43314 1243 aa16.4■□□□□ 0.22
RTN1-204ENST00000432103 MBD4O95243 580 aa16.4■□□□□ 0.22
RTN1-204ENST00000432103 APPP05067 770 aa16.4■□□□□ 0.22
RTN1-204ENST00000432103 PRDX5P30044 214 aa16.4■□□□□ 0.22
RTN1-204ENST00000432103 MCM2P49736 904 aa16.4■□□□□ 0.22
RTN1-204ENST00000432103 GTF2IP78347 998 aa16.4■□□□□ 0.22
RTN1-204ENST00000432103 IMMTQ16891 758 aaKnown RBP16.4■□□□□ 0.22
RTN1-204ENST00000432103 SLFNL1Q499Z3 407 aa16.4■□□□□ 0.22
RTN1-204ENST00000432103 TM6SF1Q9BZW5 370 aa16.4■□□□□ 0.22
RTN1-204ENST00000432103 ZMYM6O95789 1325 aa16.4■□□□□ 0.22
RTN1-204ENST00000432103 SLC27A2O14975 620 aa16.39■□□□□ 0.21
RTN1-204ENST00000432103 DOK7Q18PE1 504 aa16.39■□□□□ 0.21
RTN1-204ENST00000432103 KIAA1551Q9HCM1 1747 aa16.39■□□□□ 0.21
RTN1-204ENST00000432103 ECE2O60344 883 aa16.39■□□□□ 0.21
RTN1-204ENST00000432103 ALX1Q15699 326 aa16.39■□□□□ 0.21
RTN1-204ENST00000432103 STRIP1Q5VSL9 837 aa16.39■□□□□ 0.21
RTN1-204ENST00000432103 FBXW7Q969H0 707 aa16.39■□□□□ 0.21
RTN1-204ENST00000432103 PALD1Q9ULE6 856 aa16.39■□□□□ 0.21
RTN1-204ENST00000432103 HMGB1P09429 215 aaKnown RBP16.38■□□□□ 0.21
RTN1-204ENST00000432103 AOC3Q16853 763 aa16.38■□□□□ 0.21
RTN1-204ENST00000432103 JAG2Q9Y219 1238 aa16.38■□□□□ 0.21
RTN1-204ENST00000432103 CCDC88AQ3V6T2 1871 aa16.38■□□□□ 0.21
RTN1-204ENST00000432103 PLCG2P16885 1265 aa16.37■□□□□ 0.21
RTN1-204ENST00000432103 VPS53Q5VIR6 699 aa16.37■□□□□ 0.21
RTN1-204ENST00000432103 DBNDD1Q9H9R9 158 aa16.37■□□□□ 0.21
RTN1-204ENST00000432103 SLC4A4Q9Y6R1 1079 aa16.37■□□□□ 0.21
RTN1-204ENST00000432103 USP17L3A6NCW0 530 aa16.37■□□□□ 0.21
RTN1-204ENST00000432103 USP17L4A6NCW7 530 aa16.37■□□□□ 0.21
RTN1-204ENST00000432103 ZNF213O14771 459 aa16.37■□□□□ 0.21
RTN1-204ENST00000432103 NEK4P51957 841 aa16.37■□□□□ 0.21
RTN1-204ENST00000432103 GIMAP6Q6P9H5 292 aa16.37■□□□□ 0.21
RTN1-204ENST00000432103 USP17L1Q7RTZ2 530 aa16.37■□□□□ 0.21
RTN1-204ENST00000432103 LARGE2Q8N3Y3 721 aa16.37■□□□□ 0.21
RTN1-204ENST00000432103 FAM163AQ96GL9 167 aaPredicted RBP16.37■□□□□ 0.21
RTN1-204ENST00000432103 CRNKL1Q9BZJ0 848 aaKnown RBP16.37■□□□□ 0.21
RTN1-204ENST00000432103 NAPBQ9H115 298 aa16.37■□□□□ 0.21
RTN1-204ENST00000432103 TAOK3Q9H2K8 898 aa16.37■□□□□ 0.21
RTN1-204ENST00000432103 ARMT1Q9H993 441 aa16.37■□□□□ 0.21
RTN1-204ENST00000432103 BCS1LQ9Y276 419 aa16.37■□□□□ 0.21
RTN1-204ENST00000432103 CYP46A1Q9Y6A2 500 aa16.37■□□□□ 0.21
RTN1-204ENST00000432103 FGAP02671 866 aa16.36■□□□□ 0.21
RTN1-204ENST00000432103 MIGA1Q8NAN2 632 aa16.36■□□□□ 0.21
RTN1-204ENST00000432103 RIOK1Q9BRS2 568 aaKnown RBP16.36■□□□□ 0.21
RTN1-204ENST00000432103 MYO5AQ9Y4I1 1855 aaKnown RBP16.36■□□□□ 0.21
RTN1-204ENST00000432103 MROH7-TTC4A0A0A0MT08 1334 aa16.36■□□□□ 0.21
RTN1-204ENST00000432103 MYO3BQ8WXR4 1341 aa16.36■□□□□ 0.21
RTN1-204ENST00000432103 RASEFQ8IZ41 740 aa16.36■□□□□ 0.21
RTN1-204ENST00000432103 LCORLQ8N3X6 602 aa16.36■□□□□ 0.21
RTN1-204ENST00000432103 JAKMIP1Q96N16 626 aaKnown RBP16.36■□□□□ 0.21
RTN1-204ENST00000432103 LTBP3Q9NS15 1303 aa16.35■□□□□ 0.21
RTN1-204ENST00000432103 CYP21A2P08686 494 aa16.35■□□□□ 0.21
RTN1-204ENST00000432103 TDO2P48775 406 aa16.35■□□□□ 0.21
RTN1-204ENST00000432103 NIM1KQ8IY84 436 aa16.35■□□□□ 0.21
RTN1-204ENST00000432103 IFNL3Q8IZI9 196 aa16.35■□□□□ 0.21
RTN1-204ENST00000432103 ATP8A2Q9NTI2 1148 aa16.35■□□□□ 0.21
RTN1-204ENST00000432103 CASTP20810 708 aaKnown RBP16.34■□□□□ 0.21
RTN1-204ENST00000432103 IARSP41252 1262 aaKnown RBP16.34■□□□□ 0.21
RTN1-204ENST00000432103 PPP4CP60510 307 aa16.34■□□□□ 0.21
RTN1-204ENST00000432103 BLOC1S2Q6QNY1 142 aa16.34■□□□□ 0.21
RTN1-204ENST00000432103 ADGRA1Q86SQ6 560 aa16.34■□□□□ 0.21
RTN1-204ENST00000432103 JDP2Q8WYK2 163 aa16.34■□□□□ 0.21
RTN1-204ENST00000432103 MRIQ9BWK5 157 aa16.34■□□□□ 0.21
RTN1-204ENST00000432103 TBC1D2Q9BYX2 928 aa16.34■□□□□ 0.21
RTN1-204ENST00000432103 ZSWIM6Q9HCJ5 1215 aa16.34■□□□□ 0.21
RTN1-204ENST00000432103 BRCA1P38398 1863 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms