RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 ZBED3Q96IU2 234 aaPredicted RBP22.48■■□□□ 1.19
RFTN1-202ENST00000431547 LNPKQ9C0E8 428 aa22.48■■□□□ 1.19
RFTN1-202ENST00000431547 PGAP2Q9UHJ9 254 aa22.48■■□□□ 1.19
RFTN1-202ENST00000431547 TTC41PQ6P2S7 1318 aa22.48■■□□□ 1.19
RFTN1-202ENST00000431547 IGSF3O75054 1194 aa22.47■■□□□ 1.19
RFTN1-202ENST00000431547 POTEIP0CG38 1075 aa22.47■■□□□ 1.19
RFTN1-202ENST00000431547 POTEJP0CG39 1038 aa22.47■■□□□ 1.19
RFTN1-202ENST00000431547 DLGAP5Q15398 846 aa22.47■■□□□ 1.19
RFTN1-202ENST00000431547 ERICH6Q7L0X2 663 aa22.47■■□□□ 1.19
RFTN1-202ENST00000431547 SALL3Q9BXA9 1300 aa22.47■■□□□ 1.19
RFTN1-202ENST00000431547 MX1P20591 662 aa22.46■■□□□ 1.19
RFTN1-202ENST00000431547 CRKP46108 304 aa22.46■■□□□ 1.19
RFTN1-202ENST00000431547 CFAP100Q494V2 611 aa22.46■■□□□ 1.19
RFTN1-202ENST00000431547 HHIPL2Q6UWX4 724 aa22.46■■□□□ 1.19
RFTN1-202ENST00000431547 RBM46Q8TBY0 533 aaKnown RBP22.46■■□□□ 1.19
RFTN1-202ENST00000431547 HAUS7Q99871 368 aa22.46■■□□□ 1.19
RFTN1-202ENST00000431547 BOLA2Q9H3K6 86 aa22.46■■□□□ 1.19
RFTN1-202ENST00000431547 CLEC11AQ9Y240 323 aa22.46■■□□□ 1.19
RFTN1-202ENST00000431547 WNT10BO00744 389 aa22.45■■□□□ 1.18
RFTN1-202ENST00000431547 TEKT1Q969V4 418 aa22.45■■□□□ 1.18
RFTN1-202ENST00000431547 LRP2BPQ9P2M1 347 aa22.45■■□□□ 1.18
RFTN1-202ENST00000431547 STAP2Q9UGK3 403 aa22.45■■□□□ 1.18
RFTN1-202ENST00000431547 ERC2O15083 957 aa22.44■■□□□ 1.18
RFTN1-202ENST00000431547 RBM5P52756 815 aaKnown RBP eCLIP22.44■■□□□ 1.18
RFTN1-202ENST00000431547 TTF1Q15361 905 aaPredicted RBP22.44■■□□□ 1.18
RFTN1-202ENST00000431547 NBPF9Q3BBW0 867 aa22.44■■□□□ 1.18
RFTN1-202ENST00000431547 CHADLQ6NUI6 762 aa22.44■■□□□ 1.18
RFTN1-202ENST00000431547 CENPQQ7L2Z9 268 aaPredicted RBP22.44■■□□□ 1.18
RFTN1-202ENST00000431547 CCDC136Q96JN2 1154 aa22.44■■□□□ 1.18
RFTN1-202ENST00000431547 PIH1D3Q9NQM4 214 aaKnown RBP22.44■■□□□ 1.18
RFTN1-202ENST00000431547 NDUFB9Q9Y6M9 179 aa22.44■■□□□ 1.18
RFTN1-202ENST00000431547 SPDYE2BA6NHP3 402 aa22.43■■□□□ 1.18
RFTN1-202ENST00000431547 SPDYE6P0CI01 402 aa22.43■■□□□ 1.18
RFTN1-202ENST00000431547 MECOMQ03112 1051 aa22.43■■□□□ 1.18
RFTN1-202ENST00000431547 DZIP1Q86YF9 867 aaKnown RBP22.43■■□□□ 1.18
RFTN1-202ENST00000431547 SLF2Q8IX21 1173 aa22.43■■□□□ 1.18
RFTN1-202ENST00000431547 SMC1BQ8NDV3 1235 aa22.43■■□□□ 1.18
RFTN1-202ENST00000431547 PRMT6Q96LA8 375 aaPredicted RBP22.43■■□□□ 1.18
RFTN1-202ENST00000431547 ZDHHC15Q96MV8 337 aa22.43■■□□□ 1.18
RFTN1-202ENST00000431547 DNAJC2Q99543 621 aaKnown RBP22.43■■□□□ 1.18
RFTN1-202ENST00000431547 ANTXR1Q9H6X2 564 aa22.43■■□□□ 1.18
RFTN1-202ENST00000431547 RAI14Q9P0K7 980 aa22.43■■□□□ 1.18
RFTN1-202ENST00000431547 GLRX3O76003 335 aaKnown RBP22.42■■□□□ 1.18
RFTN1-202ENST00000431547 PDE1AP54750 535 aa22.42■■□□□ 1.18
RFTN1-202ENST00000431547 DIXDC1Q155Q3 683 aa22.42■■□□□ 1.18
RFTN1-202ENST00000431547 TSHZ3Q63HK5 1081 aa22.42■■□□□ 1.18
RFTN1-202ENST00000431547 PI4K2BQ8TCG2 481 aa22.42■■□□□ 1.18
RFTN1-202ENST00000431547 NSUN4Q96CB9 384 aaKnown RBP22.42■■□□□ 1.18
RFTN1-202ENST00000431547 FAM163AQ96GL9 167 aaPredicted RBP22.42■■□□□ 1.18
RFTN1-202ENST00000431547 PAG1Q9NWQ8 432 aa22.42■■□□□ 1.18
RFTN1-202ENST00000431547 PCDHAC2Q9Y5I4 1007 aa22.42■■□□□ 1.18
RFTN1-202ENST00000431547 GOLIM4O00461 696 aa22.41■■□□□ 1.18
RFTN1-202ENST00000431547 GSTO1P78417 241 aa22.41■■□□□ 1.18
RFTN1-202ENST00000431547 FSTL1Q12841 308 aa22.41■■□□□ 1.18
RFTN1-202ENST00000431547 ZNF384Q8TF68 577 aa22.41■■□□□ 1.18
RFTN1-202ENST00000431547 PPP4R2Q9NY27 417 aa22.41■■□□□ 1.18
RFTN1-202ENST00000431547 MYO1BO43795 1136 aa22.4■■□□□ 1.18
RFTN1-202ENST00000431547 LDHCP07864 332 aa22.4■■□□□ 1.18
RFTN1-202ENST00000431547 APOBEC3HQ6NTF7 200 aaKnown RBP22.4■■□□□ 1.18
RFTN1-202ENST00000431547 TMED8Q6PL24 325 aaPredicted RBP22.4■■□□□ 1.18
RFTN1-202ENST00000431547 PLEKHM2Q8IWE5 1019 aa22.4■■□□□ 1.18
RFTN1-202ENST00000431547 ADAMTSL1Q8N6G6 1762 aa22.4■■□□□ 1.18
RFTN1-202ENST00000431547 GAKO14976 1311 aa22.39■■□□□ 1.18
RFTN1-202ENST00000431547 ASTN2O75129 1339 aaPredicted RBP22.39■■□□□ 1.18
RFTN1-202ENST00000431547 PITPNM2Q9BZ72 1349 aa22.39■■□□□ 1.18
RFTN1-202ENST00000431547 IDH1O75874 414 aaKnown RBP22.39■■□□□ 1.17
RFTN1-202ENST00000431547 MAP3K12Q12852 859 aa22.39■■□□□ 1.17
RFTN1-202ENST00000431547 ANGEL2Q5VTE6 544 aaKnown RBP22.39■■□□□ 1.17
RFTN1-202ENST00000431547 MAP1SQ66K74 1059 aaPredicted RBP22.39■■□□□ 1.17
RFTN1-202ENST00000431547 CNTROBQ8N137 903 aa22.39■■□□□ 1.17
RFTN1-202ENST00000431547 DCPSQ96C86 337 aaKnown RBP22.39■■□□□ 1.17
RFTN1-202ENST00000431547 EDC3Q96F86 508 aaKnown RBP22.39■■□□□ 1.17
RFTN1-202ENST00000431547 OSBPL3Q9H4L5 887 aa22.39■■□□□ 1.17
RFTN1-202ENST00000431547 GGA3Q9NZ52 723 aa22.39■■□□□ 1.17
RFTN1-202ENST00000431547 DAGLAQ9Y4D2 1042 aa22.39■■□□□ 1.17
RFTN1-202ENST00000431547 AKAP11Q9UKA4 1901 aa22.39■■□□□ 1.17
RFTN1-202ENST00000431547 AOX1Q06278 1338 aa22.38■■□□□ 1.17
RFTN1-202ENST00000431547 MYH13Q9UKX3 1938 aa22.38■■□□□ 1.17
RFTN1-202ENST00000431547 MROH7-TTC4A0A0A0MT08 1334 aa22.37■■□□□ 1.17
RFTN1-202ENST00000431547 ITGBL1O95965 494 aaPredicted RBP22.37■■□□□ 1.17
RFTN1-202ENST00000431547 PDE4AP27815 886 aa22.37■■□□□ 1.17
RFTN1-202ENST00000431547 NAA16Q6N069 864 aaPredicted RBP22.37■■□□□ 1.17
RFTN1-202ENST00000431547 CDC37L1Q7L3B6 337 aa22.37■■□□□ 1.17
RFTN1-202ENST00000431547 GPR75-ASB3A0A0A6YYF3 556 aa22.36■■□□□ 1.17
RFTN1-202ENST00000431547 SPDYE2Q495Y8 402 aa22.36■■□□□ 1.17
RFTN1-202ENST00000431547 TDRD3Q9H7E2 651 aaKnown RBP22.36■■□□□ 1.17
RFTN1-202ENST00000431547 ZNF70Q9UC06 446 aaPredicted RBP22.36■■□□□ 1.17
RFTN1-202ENST00000431547 CLRN2A0PK11 232 aa22.35■■□□□ 1.17
RFTN1-202ENST00000431547 KRT26Q7Z3Y9 468 aa22.35■■□□□ 1.17
RFTN1-202ENST00000431547 SULF1Q8IWU6 871 aa22.35■■□□□ 1.17
RFTN1-202ENST00000431547 CYP7A1P22680 504 aa22.34■■□□□ 1.17
RFTN1-202ENST00000431547 SLC9C2Q5TAH2 1124 aa22.34■■□□□ 1.17
RFTN1-202ENST00000431547 USP48Q86UV5 1035 aa22.34■■□□□ 1.17
RFTN1-202ENST00000431547 APOBEC3FQ8IUX4 373 aaKnown RBP22.34■■□□□ 1.17
RFTN1-202ENST00000431547 MAGEB6Q8N7X4 407 aa22.34■■□□□ 1.17
RFTN1-202ENST00000431547 KBTBD3Q8NAB2 608 aa22.34■■□□□ 1.17
RFTN1-202ENST00000431547 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.34■■□□□ 1.17
RFTN1-202ENST00000431547 PDE6AP16499 860 aa22.33■■□□□ 1.17
RFTN1-202ENST00000431547 BTDP43251 543 aa22.33■■□□□ 1.17
RFTN1-202ENST00000431547 CDC42EP5Q6NZY7 148 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms