RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 FMNL2Q96PY5 1086 aa8.41□□□□□ -1.06
COL28A1-202ENST00000430711 MYL10Q9BUA6 226 aa8.41□□□□□ -1.06
COL28A1-202ENST00000430711 UBR2Q8IWV8 1755 aa8.4□□□□□ -1.06
COL28A1-202ENST00000430711 NPHP1O15259 732 aa8.4□□□□□ -1.06
COL28A1-202ENST00000430711 HSP90AA4PQ58FG1 418 aa8.4□□□□□ -1.06
COL28A1-202ENST00000430711 MAP7D2Q96T17 732 aa8.4□□□□□ -1.06
COL28A1-202ENST00000430711 ZNF215Q9UL58 517 aaPredicted RBP8.4□□□□□ -1.06
COL28A1-202ENST00000430711 AKAP11Q9UKA4 1901 aa8.4□□□□□ -1.06
COL28A1-202ENST00000430711 MST1RQ04912 1400 aa8.4□□□□□ -1.06
COL28A1-202ENST00000430711 FOXN1O15353 648 aa8.4□□□□□ -1.07
COL28A1-202ENST00000430711 FGAP02671 866 aa8.4□□□□□ -1.07
COL28A1-202ENST00000430711 TPD52L1Q16890 204 aaPredicted RBP8.4□□□□□ -1.07
COL28A1-202ENST00000430711 ARMCX5Q6P1M9 558 aa8.4□□□□□ -1.07
COL28A1-202ENST00000430711 CYB5R4Q7L1T6 521 aa8.4□□□□□ -1.07
COL28A1-202ENST00000430711 TBC1D10CQ8IV04 446 aa8.4□□□□□ -1.07
COL28A1-202ENST00000430711 DCAF5Q96JK2 942 aa8.4□□□□□ -1.07
COL28A1-202ENST00000430711 RIC1Q4ADV7 1423 aa8.4□□□□□ -1.07
COL28A1-202ENST00000430711 COL4A1P02462 1669 aa8.39□□□□□ -1.07
COL28A1-202ENST00000430711 KLF18A0A0U1RQI7 1052 aa8.39□□□□□ -1.07
COL28A1-202ENST00000430711 EYA2O00167 538 aa8.39□□□□□ -1.07
COL28A1-202ENST00000430711 RNF113AO15541 343 aaKnown RBP8.39□□□□□ -1.07
COL28A1-202ENST00000430711 SKILP12757 684 aa8.39□□□□□ -1.07
COL28A1-202ENST00000430711 KRT32Q14532 448 aa8.39□□□□□ -1.07
COL28A1-202ENST00000430711 SPECC1Q5M775 1068 aa8.39□□□□□ -1.07
COL28A1-202ENST00000430711 NAA16Q6N069 864 aaPredicted RBP8.39□□□□□ -1.07
COL28A1-202ENST00000430711 NYAP1Q6ZVC0 841 aa8.39□□□□□ -1.07
COL28A1-202ENST00000430711 MB21D2Q8IYB1 491 aaPredicted RBP8.39□□□□□ -1.07
COL28A1-202ENST00000430711 PHKBQ93100 1093 aa8.39□□□□□ -1.07
COL28A1-202ENST00000430711 ZBTB9Q96C00 473 aa8.39□□□□□ -1.07
COL28A1-202ENST00000430711 XAGE2Q96GT9 111 aa8.39□□□□□ -1.07
COL28A1-202ENST00000430711 GOLGA8BA8MQT2 603 aa8.38□□□□□ -1.07
COL28A1-202ENST00000430711 GRIN1Q05586 938 aa8.38□□□□□ -1.07
COL28A1-202ENST00000430711 FAM160A1Q05DH4 1040 aa8.38□□□□□ -1.07
COL28A1-202ENST00000430711 DMTNQ08495 405 aa8.38□□□□□ -1.07
COL28A1-202ENST00000430711 NCAPHQ15003 741 aa8.38□□□□□ -1.07
COL28A1-202ENST00000430711 STX1AQ16623 288 aa8.38□□□□□ -1.07
COL28A1-202ENST00000430711 WASHC4Q2M389 1173 aa8.38□□□□□ -1.07
COL28A1-202ENST00000430711 E4F1Q66K89 784 aaPredicted RBP8.38□□□□□ -1.07
COL28A1-202ENST00000430711 SMAP1Q8IYB5 467 aaPredicted RBP8.38□□□□□ -1.07
COL28A1-202ENST00000430711 LINC00301Q8NCQ3 95 aa8.38□□□□□ -1.07
COL28A1-202ENST00000430711 CLIC6Q96NY7 704 aa8.38□□□□□ -1.07
COL28A1-202ENST00000430711 DSCC1Q9BVC3 393 aa8.38□□□□□ -1.07
COL28A1-202ENST00000430711 XPO4Q9C0E2 1151 aaKnown RBP8.38□□□□□ -1.07
COL28A1-202ENST00000430711 CWC25Q9NXE8 425 aaPredicted RBP8.38□□□□□ -1.07
COL28A1-202ENST00000430711 CTNNA3Q9UI47 895 aa8.38□□□□□ -1.07
COL28A1-202ENST00000430711 TRPC5Q9UL62 973 aaPredicted RBP8.38□□□□□ -1.07
COL28A1-202ENST00000430711 SLIT2O94813 1529 aa8.38□□□□□ -1.07
COL28A1-202ENST00000430711 TMEM232C9JQI7 657 aa8.38□□□□□ -1.07
COL28A1-202ENST00000430711 PRC1O43663 620 aa8.38□□□□□ -1.07
COL28A1-202ENST00000430711 GPTP24298 496 aa8.38□□□□□ -1.07
COL28A1-202ENST00000430711 CDC27P30260 824 aa8.38□□□□□ -1.07
COL28A1-202ENST00000430711 MCAMP43121 646 aa8.38□□□□□ -1.07
COL28A1-202ENST00000430711 HLFQ16534 295 aa8.38□□□□□ -1.07
COL28A1-202ENST00000430711 KMT5BQ4FZB7 885 aa8.38□□□□□ -1.07
COL28A1-202ENST00000430711 AXDND1Q5T1B0 1012 aaPredicted RBP8.38□□□□□ -1.07
COL28A1-202ENST00000430711 SEC31BQ9NQW1 1179 aa8.38□□□□□ -1.07
COL28A1-202ENST00000430711 HELLSQ9NRZ9 838 aa8.38□□□□□ -1.07
COL28A1-202ENST00000430711 MYH7P12883 1935 aa8.38□□□□□ -1.07
COL28A1-202ENST00000430711 RFX7Q2KHR2 1363 aa8.38□□□□□ -1.07
COL28A1-202ENST00000430711 GOLGA6L6A8MZA4 724 aa8.37□□□□□ -1.07
COL28A1-202ENST00000430711 C1QTNF8P60827 252 aa8.37□□□□□ -1.07
COL28A1-202ENST00000430711 ELF2Q15723 593 aa8.37□□□□□ -1.07
COL28A1-202ENST00000430711 CEP135Q66GS9 1140 aa8.37□□□□□ -1.07
COL28A1-202ENST00000430711 SARM1Q6SZW1 724 aa8.37□□□□□ -1.07
COL28A1-202ENST00000430711 CMTR1Q8N1G2 835 aaKnown RBP8.37□□□□□ -1.07
COL28A1-202ENST00000430711 HELBQ8NG08 1087 aaPredicted RBP8.37□□□□□ -1.07
COL28A1-202ENST00000430711 C8orf37Q96NL8 207 aa8.37□□□□□ -1.07
COL28A1-202ENST00000430711 EPC1Q9H2F5 836 aa8.37□□□□□ -1.07
COL28A1-202ENST00000430711 ZSCAN16Q9H4T2 348 aaPredicted RBP8.37□□□□□ -1.07
COL28A1-202ENST00000430711 PIH1D3Q9NQM4 214 aaKnown RBP8.37□□□□□ -1.07
COL28A1-202ENST00000430711 ZNF446Q9NWS9 450 aa8.37□□□□□ -1.07
COL28A1-202ENST00000430711 IFNKQ9P0W0 207 aa8.37□□□□□ -1.07
COL28A1-202ENST00000430711 PAPPAQ13219 1627 aa8.37□□□□□ -1.07
COL28A1-202ENST00000430711 WTIPA6NIX2 430 aaPredicted RBP8.37□□□□□ -1.07
COL28A1-202ENST00000430711 SMTNL1A8MU46 457 aa8.37□□□□□ -1.07
COL28A1-202ENST00000430711 RANBP6O60518 1105 aaKnown RBP8.37□□□□□ -1.07
COL28A1-202ENST00000430711 LMOD1P29536 600 aaPredicted RBP8.37□□□□□ -1.07
COL28A1-202ENST00000430711 PDE4BQ07343 736 aa8.37□□□□□ -1.07
COL28A1-202ENST00000430711 FOXP4Q8IVH2 680 aaPredicted RBP8.37□□□□□ -1.07
COL28A1-202ENST00000430711 CCAR2Q8N163 923 aaKnown RBP8.37□□□□□ -1.07
COL28A1-202ENST00000430711 CFAP45Q9UL16 551 aa8.37□□□□□ -1.07
COL28A1-202ENST00000430711 WWC3Q9ULE0 1092 aa8.37□□□□□ -1.07
COL28A1-202ENST00000430711 GOLGA6L19H0YKK7 550 aa8.36□□□□□ -1.07
COL28A1-202ENST00000430711 GPAA1O43292 621 aa8.36□□□□□ -1.07
COL28A1-202ENST00000430711 KINO60870 393 aaKnown RBP8.36□□□□□ -1.07
COL28A1-202ENST00000430711 PFKFB1P16118 471 aa8.36□□□□□ -1.07
COL28A1-202ENST00000430711 BMP6P22004 513 aa8.36□□□□□ -1.07
COL28A1-202ENST00000430711 GUCY1A2P33402 732 aa8.36□□□□□ -1.07
COL28A1-202ENST00000430711 PNOCQ13519 176 aa8.36□□□□□ -1.07
COL28A1-202ENST00000430711 MYSM1Q5VVJ2 828 aa8.36□□□□□ -1.07
COL28A1-202ENST00000430711 FBXO38Q6PIJ6 1188 aa8.36□□□□□ -1.07
COL28A1-202ENST00000430711 CCDC73Q6ZRK6 1079 aa8.36□□□□□ -1.07
COL28A1-202ENST00000430711 TMC6Q7Z403 805 aa8.36□□□□□ -1.07
COL28A1-202ENST00000430711 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.36□□□□□ -1.07
COL28A1-202ENST00000430711 MRPS27Q92552 414 aaKnown RBP8.36□□□□□ -1.07
COL28A1-202ENST00000430711 SHISA4Q96DD7 197 aa8.36□□□□□ -1.07
COL28A1-202ENST00000430711 MRFAP1L1Q96HT8 127 aa8.36□□□□□ -1.07
COL28A1-202ENST00000430711 LLPHQ9BRT6 129 aaKnown RBP8.36□□□□□ -1.07
COL28A1-202ENST00000430711 TMX1Q9H3N1 280 aa8.36□□□□□ -1.07
COL28A1-202ENST00000430711 GREM2Q9H772 168 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms