RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 FBXO3Q9UK99 471 aa15.6■□□□□ 0.09
SMPD4-204ENST00000430682 MYO5AQ9Y4I1 1855 aaKnown RBP15.59■□□□□ 0.09
SMPD4-204ENST00000430682 SLC5A1P13866 664 aa15.59■□□□□ 0.09
SMPD4-204ENST00000430682 IL15P40933 162 aaPredicted RBP15.59■□□□□ 0.09
SMPD4-204ENST00000430682 PHKA1P46020 1223 aa15.59■□□□□ 0.09
SMPD4-204ENST00000430682 TIMM10P62072 90 aa15.59■□□□□ 0.09
SMPD4-204ENST00000430682 SPDYE2Q495Y8 402 aa15.59■□□□□ 0.09
SMPD4-204ENST00000430682 NBPF12Q5TAG4 269 aaPredicted RBP15.59■□□□□ 0.09
SMPD4-204ENST00000430682 DZIP1LQ8IYY4 767 aaKnown RBP15.59■□□□□ 0.09
SMPD4-204ENST00000430682 CCDC102AQ96A19 550 aa15.59■□□□□ 0.09
SMPD4-204ENST00000430682 LAMB1P07942 1786 aa15.59■□□□□ 0.09
SMPD4-204ENST00000430682 FRAT2O75474 233 aaPredicted RBP15.58■□□□□ 0.08
SMPD4-204ENST00000430682 GNAI2P04899 355 aa15.58■□□□□ 0.08
SMPD4-204ENST00000430682 TFCP2Q12800 502 aa15.58■□□□□ 0.08
SMPD4-204ENST00000430682 TTLL12Q14166 644 aaPredicted RBP15.58■□□□□ 0.08
SMPD4-204ENST00000430682 RASA3Q14644 834 aa15.58■□□□□ 0.08
SMPD4-204ENST00000430682 LDLRAD1Q5T700 205 aa15.58■□□□□ 0.08
SMPD4-204ENST00000430682 C1orf115Q9H7X2 142 aa15.58■□□□□ 0.08
SMPD4-204ENST00000430682 AK9Q5TCS8 1911 aa15.57■□□□□ 0.08
SMPD4-204ENST00000430682 CACNB3P54284 484 aa15.57■□□□□ 0.08
SMPD4-204ENST00000430682 TEPSINQ96N21 525 aa15.57■□□□□ 0.08
SMPD4-204ENST00000430682 ANGEL1Q9UNK9 670 aaKnown RBP15.57■□□□□ 0.08
SMPD4-204ENST00000430682 CAPN15O75808 1086 aa15.56■□□□□ 0.08
SMPD4-204ENST00000430682 MKRN3Q13064 507 aaKnown RBP15.56■□□□□ 0.08
SMPD4-204ENST00000430682 APOBEC3HQ6NTF7 200 aaKnown RBP15.56■□□□□ 0.08
SMPD4-204ENST00000430682 TBC1D22AQ8WUA7 517 aa15.56■□□□□ 0.08
SMPD4-204ENST00000430682 CLMNQ96JQ2 1002 aa15.56■□□□□ 0.08
SMPD4-204ENST00000430682 BEGAINQ9BUH8 593 aa15.56■□□□□ 0.08
SMPD4-204ENST00000430682 RNF186Q9NXI6 227 aa15.56■□□□□ 0.08
SMPD4-204ENST00000430682 HDAC5Q9UQL6 1122 aa15.56■□□□□ 0.08
SMPD4-204ENST00000430682 TCP10L2B9ZVM9 353 aa15.55■□□□□ 0.08
SMPD4-204ENST00000430682 ZBTB7BO15156 539 aaPredicted RBP15.55■□□□□ 0.08
SMPD4-204ENST00000430682 MYO1BO43795 1136 aa15.55■□□□□ 0.08
SMPD4-204ENST00000430682 USP2O75604 605 aaPredicted RBP15.55■□□□□ 0.08
SMPD4-204ENST00000430682 PRDX5P30044 214 aa15.55■□□□□ 0.08
SMPD4-204ENST00000430682 HDLBPQ00341 1268 aaKnown RBP15.55■□□□□ 0.08
SMPD4-204ENST00000430682 CCDC102BQ68D86 513 aa15.55■□□□□ 0.08
SMPD4-204ENST00000430682 PANK1Q8TE04 598 aa15.55■□□□□ 0.08
SMPD4-204ENST00000430682 TMEM39BQ9GZU3 492 aa15.55■□□□□ 0.08
SMPD4-204ENST00000430682 A0A1B0GUL7 405 aa15.54■□□□□ 0.08
SMPD4-204ENST00000430682 TRPA1O75762 1119 aa15.54■□□□□ 0.08
SMPD4-204ENST00000430682 NF2P35240 595 aa15.54■□□□□ 0.08
SMPD4-204ENST00000430682 POLA2Q14181 598 aa15.54■□□□□ 0.08
SMPD4-204ENST00000430682 DIXDC1Q155Q3 683 aa15.54■□□□□ 0.08
SMPD4-204ENST00000430682 MAP3K11Q16584 847 aa15.54■□□□□ 0.08
SMPD4-204ENST00000430682 TEKT1Q969V4 418 aa15.54■□□□□ 0.08
SMPD4-204ENST00000430682 XAGE2Q96GT9 111 aa15.54■□□□□ 0.08
SMPD4-204ENST00000430682 ZDHHC15Q96MV8 337 aa15.54■□□□□ 0.08
SMPD4-204ENST00000430682 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.54■□□□□ 0.08
SMPD4-204ENST00000430682 PPP2R3BQ9Y5P8 575 aa15.54■□□□□ 0.08
SMPD4-204ENST00000430682 RASGRF1Q13972 1273 aa15.53■□□□□ 0.08
SMPD4-204ENST00000430682 ARMC9Q7Z3E5 817 aa15.53■□□□□ 0.08
SMPD4-204ENST00000430682 WDR66Q8TBY9 1149 aa15.53■□□□□ 0.08
SMPD4-204ENST00000430682 SSH3Q8TE77 659 aa15.53■□□□□ 0.08
SMPD4-204ENST00000430682 MRIQ9BWK5 157 aa15.53■□□□□ 0.08
SMPD4-204ENST00000430682 CA12O43570 354 aa15.52■□□□□ 0.08
SMPD4-204ENST00000430682 GJA5P36382 358 aa15.52■□□□□ 0.08
SMPD4-204ENST00000430682 ATP8B2P98198 1209 aa15.52■□□□□ 0.08
SMPD4-204ENST00000430682 HHIPL2Q6UWX4 724 aa15.52■□□□□ 0.08
SMPD4-204ENST00000430682 PI16Q6UXB8 463 aa15.52■□□□□ 0.08
SMPD4-204ENST00000430682 ITPRIPQ8IWB1 547 aa15.52■□□□□ 0.08
SMPD4-204ENST00000430682 SUGT1Q9Y2Z0 365 aa15.52■□□□□ 0.08
SMPD4-204ENST00000430682 DAGLAQ9Y4D2 1042 aa15.52■□□□□ 0.08
SMPD4-204ENST00000430682 SALL1Q9NSC2 1324 aa15.51■□□□□ 0.07
SMPD4-204ENST00000430682 SUPT20HL1Q3ZLR7 823 aa15.51■□□□□ 0.07
SMPD4-204ENST00000430682 SPRYD7Q5W111 196 aa15.51■□□□□ 0.07
SMPD4-204ENST00000430682 FTSJ3Q8IY81 847 aaKnown RBP15.51■□□□□ 0.07
SMPD4-204ENST00000430682 ZNF384Q8TF68 577 aa15.51■□□□□ 0.07
SMPD4-204ENST00000430682 HTTP42858 3142 aa15.51■□□□□ 0.07
SMPD4-204ENST00000430682 ZBTB22O15209 634 aa15.5■□□□□ 0.07
SMPD4-204ENST00000430682 TM4SF4P48230 202 aa15.5■□□□□ 0.07
SMPD4-204ENST00000430682 CDC42EP5Q6NZY7 148 aa15.5■□□□□ 0.07
SMPD4-204ENST00000430682 NEUROD6Q96NK8 337 aa15.5■□□□□ 0.07
SMPD4-204ENST00000430682 R3HDMLQ9H3Y0 253 aa15.5■□□□□ 0.07
SMPD4-204ENST00000430682 GNL3LQ9NVN8 582 aaKnown RBP15.5■□□□□ 0.07
SMPD4-204ENST00000430682 SAGE1Q9NXZ1 904 aa15.5■□□□□ 0.07
SMPD4-204ENST00000430682 DENND2AQ9ULE3 1009 aa15.5■□□□□ 0.07
SMPD4-204ENST00000430682 CDK5RAP2Q96SN8 1893 aa15.5■□□□□ 0.07
SMPD4-204ENST00000430682 SEMA3EO15041 775 aa15.49■□□□□ 0.07
SMPD4-204ENST00000430682 PPP1R12BO60237 982 aaPredicted RBP15.49■□□□□ 0.07
SMPD4-204ENST00000430682 NFIAQ12857 509 aa15.49■□□□□ 0.07
SMPD4-204ENST00000430682 G3BP1Q13283 466 aaKnown RBP eCLIP15.49■□□□□ 0.07
SMPD4-204ENST00000430682 TNFAIP1Q13829 316 aa15.49■□□□□ 0.07
SMPD4-204ENST00000430682 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.49■□□□□ 0.07
SMPD4-204ENST00000430682 CNKSR2Q8WXI2 1034 aa15.49■□□□□ 0.07
SMPD4-204ENST00000430682 SLC10A4Q96EP9 437 aa15.49■□□□□ 0.07
SMPD4-204ENST00000430682 WNK4Q96J92 1243 aa15.49■□□□□ 0.07
SMPD4-204ENST00000430682 HMG20BQ9P0W2 317 aa15.49■□□□□ 0.07
SMPD4-204ENST00000430682 AKAP2Q9Y2D5 859 aa15.49■□□□□ 0.07
SMPD4-204ENST00000430682 MAST3O60307 1309 aa15.48■□□□□ 0.07
SMPD4-204ENST00000430682 CENPFP49454 3210 aa15.48■□□□□ 0.07
SMPD4-204ENST00000430682 DOCK2Q92608 1830 aa15.48■□□□□ 0.07
SMPD4-204ENST00000430682 LDHBP07195 334 aaKnown RBP15.48■□□□□ 0.07
SMPD4-204ENST00000430682 CEP85Q6P2H3 762 aa15.48■□□□□ 0.07
SMPD4-204ENST00000430682 ZFPM1Q8IX07 1006 aa15.48■□□□□ 0.07
SMPD4-204ENST00000430682 FAM198AQ9UFP1 575 aa15.48■□□□□ 0.07
SMPD4-204ENST00000430682 TNRC18O15417 2968 aaPredicted RBP15.47■□□□□ 0.07
SMPD4-204ENST00000430682 SURF6O75683 361 aaKnown RBP15.47■□□□□ 0.07
SMPD4-204ENST00000430682 TBC1D8O95759 1140 aa15.47■□□□□ 0.07
SMPD4-204ENST00000430682 MVPQ14764 893 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms