RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 PHIPQ8WWQ0 1821 aa14.78□□□□□ -0.04
HDAC4-202ENST00000430200 KIF16BQ96L93 1317 aa14.77□□□□□ -0.04
HDAC4-202ENST00000430200 BCAR3O75815 825 aa14.77□□□□□ -0.05
HDAC4-202ENST00000430200 CT47B1P0C2W7 299 aaPredicted RBP14.77□□□□□ -0.05
HDAC4-202ENST00000430200 UBTFL1P0CB47 393 aaPredicted RBP14.77□□□□□ -0.05
HDAC4-202ENST00000430200 RBM5P52756 815 aaKnown RBP eCLIP14.77□□□□□ -0.05
HDAC4-202ENST00000430200 DGKZQ13574 1117 aa14.77□□□□□ -0.05
HDAC4-202ENST00000430200 MAP3K11Q16584 847 aa14.77□□□□□ -0.05
HDAC4-202ENST00000430200 DZIP1LQ8IYY4 767 aaKnown RBP14.77□□□□□ -0.05
HDAC4-202ENST00000430200 MIER1Q8N108 512 aa14.77□□□□□ -0.05
HDAC4-202ENST00000430200 SERPINA10Q9UK55 444 aa14.77□□□□□ -0.05
HDAC4-202ENST00000430200 SIPA1L1O43166 1804 aa14.77□□□□□ -0.05
HDAC4-202ENST00000430200 FOCADQ5VW36 1801 aa14.77□□□□□ -0.05
HDAC4-202ENST00000430200 ATAD5Q96QE3 1844 aa14.77□□□□□ -0.05
HDAC4-202ENST00000430200 RBBP6Q7Z6E9 1792 aaKnown RBP14.76□□□□□ -0.05
HDAC4-202ENST00000430200 TRIM27P14373 513 aa14.76□□□□□ -0.05
HDAC4-202ENST00000430200 NF2P35240 595 aa14.76□□□□□ -0.05
HDAC4-202ENST00000430200 SPRYD7Q5W111 196 aa14.76□□□□□ -0.05
HDAC4-202ENST00000430200 TMEM39BQ9GZU3 492 aa14.76□□□□□ -0.05
HDAC4-202ENST00000430200 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.76□□□□□ -0.05
HDAC4-202ENST00000430200 PPP2R3BQ9Y5P8 575 aa14.76□□□□□ -0.05
HDAC4-202ENST00000430200 TCP10L2B9ZVM9 353 aa14.75□□□□□ -0.05
HDAC4-202ENST00000430200 TBC1D8O95759 1140 aa14.75□□□□□ -0.05
HDAC4-202ENST00000430200 ADORA1P30542 326 aa14.75□□□□□ -0.05
HDAC4-202ENST00000430200 INTS3Q68E01 1043 aaKnown RBP14.75□□□□□ -0.05
HDAC4-202ENST00000430200 CNKSR2Q8WXI2 1034 aa14.75□□□□□ -0.05
HDAC4-202ENST00000430200 WNK4Q96J92 1243 aa14.75□□□□□ -0.05
HDAC4-202ENST00000430200 API5Q9BZZ5 524 aaKnown RBP14.75□□□□□ -0.05
HDAC4-202ENST00000430200 DOCK1Q14185 1865 aa14.75□□□□□ -0.05
HDAC4-202ENST00000430200 CCDC85CA6NKD9 419 aa14.74□□□□□ -0.05
HDAC4-202ENST00000430200 IGF2BP3O00425 579 aaKnown RBP eCLIP14.74□□□□□ -0.05
HDAC4-202ENST00000430200 USP2O75604 605 aaPredicted RBP14.74□□□□□ -0.05
HDAC4-202ENST00000430200 PHKA1P46020 1223 aa14.74□□□□□ -0.05
HDAC4-202ENST00000430200 ARMC9Q7Z3E5 817 aa14.74□□□□□ -0.05
HDAC4-202ENST00000430200 RFX7Q2KHR2 1363 aa14.73□□□□□ -0.05
HDAC4-202ENST00000430200 MYO1BO43795 1136 aa14.73□□□□□ -0.05
HDAC4-202ENST00000430200 CIAO1O76071 339 aa14.73□□□□□ -0.05
HDAC4-202ENST00000430200 PRDX5P30044 214 aa14.73□□□□□ -0.05
HDAC4-202ENST00000430200 TM4SF4P48230 202 aa14.73□□□□□ -0.05
HDAC4-202ENST00000430200 CAP1Q01518 475 aa14.73□□□□□ -0.05
HDAC4-202ENST00000430200 DIXDC1Q155Q3 683 aa14.73□□□□□ -0.05
HDAC4-202ENST00000430200 ATP2B3Q16720 1220 aa14.73□□□□□ -0.05
HDAC4-202ENST00000430200 APOBEC3HQ6NTF7 200 aaKnown RBP14.73□□□□□ -0.05
HDAC4-202ENST00000430200 VPS37DQ86XT2 251 aa14.73□□□□□ -0.05
HDAC4-202ENST00000430200 ZNF296Q8WUU4 475 aaPredicted RBP14.73□□□□□ -0.05
HDAC4-202ENST00000430200 LPIN2Q92539 896 aa14.73□□□□□ -0.05
HDAC4-202ENST00000430200 IFIT1P09914 478 aaKnown RBP14.72□□□□□ -0.05
HDAC4-202ENST00000430200 SLC5A1P13866 664 aa14.72□□□□□ -0.05
HDAC4-202ENST00000430200 CAVIN4Q5BKX8 364 aa14.72□□□□□ -0.05
HDAC4-202ENST00000430200 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.72□□□□□ -0.05
HDAC4-202ENST00000430200 ZDHHC15Q96MV8 337 aa14.72□□□□□ -0.05
HDAC4-202ENST00000430200 COPRSQ9NQ92 184 aa14.72□□□□□ -0.05
HDAC4-202ENST00000430200 RPAP1Q9BWH6 1393 aaPredicted RBP14.72□□□□□ -0.05
HDAC4-202ENST00000430200 MTX1Q13505 466 aa14.71□□□□□ -0.05
HDAC4-202ENST00000430200 TBC1D22AQ8WUA7 517 aa14.71□□□□□ -0.05
HDAC4-202ENST00000430200 ARHGAP45Q92619 1136 aa14.71□□□□□ -0.05
HDAC4-202ENST00000430200 TEKT1Q969V4 418 aa14.71□□□□□ -0.05
HDAC4-202ENST00000430200 CLUAP1Q96AJ1 413 aa14.71□□□□□ -0.05
HDAC4-202ENST00000430200 ELP3Q9H9T3 547 aa14.71□□□□□ -0.05
HDAC4-202ENST00000430200 DAGLAQ9Y4D2 1042 aa14.71□□□□□ -0.05
HDAC4-202ENST00000430200 PNMA6EA0A0J9YXQ4 647 aa14.7□□□□□ -0.06
HDAC4-202ENST00000430200 FRAT2O75474 233 aaPredicted RBP14.7□□□□□ -0.06
HDAC4-202ENST00000430200 HDLBPQ00341 1268 aaKnown RBP14.7□□□□□ -0.06
HDAC4-202ENST00000430200 VGLL4Q14135 290 aa14.7□□□□□ -0.06
HDAC4-202ENST00000430200 ATF7IPQ6VMQ6 1270 aa14.7□□□□□ -0.06
HDAC4-202ENST00000430200 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.7□□□□□ -0.06
HDAC4-202ENST00000430200 PTPN18Q99952 460 aa14.7□□□□□ -0.06
HDAC4-202ENST00000430200 MGAMO43451 1857 aa14.69□□□□□ -0.06
HDAC4-202ENST00000430200 GPR25O00155 361 aa14.69□□□□□ -0.06
HDAC4-202ENST00000430200 PPP1R12BO60237 982 aaPredicted RBP14.69□□□□□ -0.06
HDAC4-202ENST00000430200 ZBTB48P10074 688 aaPredicted RBP14.69□□□□□ -0.06
HDAC4-202ENST00000430200 RLBP1P12271 317 aa14.69□□□□□ -0.06
HDAC4-202ENST00000430200 HNRNPUQ00839 825 aaKnown RBP eCLIP14.69□□□□□ -0.06
HDAC4-202ENST00000430200 NFIAQ12857 509 aa14.69□□□□□ -0.06
HDAC4-202ENST00000430200 RASGRF1Q13972 1273 aa14.69□□□□□ -0.06
HDAC4-202ENST00000430200 SUPT20HL1Q3ZLR7 823 aa14.69□□□□□ -0.06
HDAC4-202ENST00000430200 CTU1Q7Z7A3 348 aaKnown RBP14.69□□□□□ -0.06
HDAC4-202ENST00000430200 IFNL1Q8IU54 200 aa14.69□□□□□ -0.06
HDAC4-202ENST00000430200 REM2Q8IYK8 340 aaPredicted RBP14.69□□□□□ -0.06
HDAC4-202ENST00000430200 TMEM57Q8N5G2 664 aa14.69□□□□□ -0.06
HDAC4-202ENST00000430200 ZNF384Q8TF68 577 aa14.69□□□□□ -0.06
HDAC4-202ENST00000430200 FRAT1Q92837 279 aaPredicted RBP14.69□□□□□ -0.06
HDAC4-202ENST00000430200 CFHR5Q9BXR6 569 aa14.69□□□□□ -0.06
HDAC4-202ENST00000430200 ATRNL1Q5VV63 1379 aa14.69□□□□□ -0.06
HDAC4-202ENST00000430200 PDE4DIPQ5VU43 2346 aa14.69□□□□□ -0.06
HDAC4-202ENST00000430200 SRGAP3O43295 1099 aa14.68□□□□□ -0.06
HDAC4-202ENST00000430200 IL15P40933 162 aaPredicted RBP14.68□□□□□ -0.06
HDAC4-202ENST00000430200 SREBF2Q12772 1141 aa14.68□□□□□ -0.06
HDAC4-202ENST00000430200 TFCP2Q12800 502 aa14.68□□□□□ -0.06
HDAC4-202ENST00000430200 TNFAIP1Q13829 316 aa14.68□□□□□ -0.06
HDAC4-202ENST00000430200 CCDC102BQ68D86 513 aa14.68□□□□□ -0.06
HDAC4-202ENST00000430200 PI16Q6UXB8 463 aa14.68□□□□□ -0.06
HDAC4-202ENST00000430200 OPTNQ96CV9 577 aa14.68□□□□□ -0.06
HDAC4-202ENST00000430200 SLC10A4Q96EP9 437 aa14.68□□□□□ -0.06
HDAC4-202ENST00000430200 FBXO3Q9UK99 471 aa14.68□□□□□ -0.06
HDAC4-202ENST00000430200 SNCAIPQ9Y6H5 919 aa14.68□□□□□ -0.06
HDAC4-202ENST00000430200 SALL1Q9NSC2 1324 aa14.67□□□□□ -0.06
HDAC4-202ENST00000430200 DDX60LQ5H9U9 1706 aaKnown RBP14.67□□□□□ -0.06
HDAC4-202ENST00000430200 SLURP2P0DP57 97 aa14.67□□□□□ -0.06
HDAC4-202ENST00000430200 IREB2P48200 963 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms