RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 ZNF70Q9UC06 446 aaPredicted RBP21.08■□□□□ 0.96
UBE3D-204ENST00000430071 CIAO1O76071 339 aa21.07■□□□□ 0.96
UBE3D-204ENST00000430071 SLC5A1P13866 664 aa21.07■□□□□ 0.96
UBE3D-204ENST00000430071 ADORA1P30542 326 aa21.07■□□□□ 0.96
UBE3D-204ENST00000430071 RRP1P56182 461 aaKnown RBP21.07■□□□□ 0.96
UBE3D-204ENST00000430071 MKRN3Q13064 507 aaKnown RBP21.07■□□□□ 0.96
UBE3D-204ENST00000430071 NBPF12Q5TAG4 269 aaPredicted RBP21.07■□□□□ 0.96
UBE3D-204ENST00000430071 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.07■□□□□ 0.96
UBE3D-204ENST00000430071 LPIN2Q92539 896 aa21.07■□□□□ 0.96
UBE3D-204ENST00000430071 COPRSQ9NQ92 184 aa21.07■□□□□ 0.96
UBE3D-204ENST00000430071 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.07■□□□□ 0.96
UBE3D-204ENST00000430071 CEP126Q9P2H0 1117 aa21.07■□□□□ 0.96
UBE3D-204ENST00000430071 ANGEL1Q9UNK9 670 aaKnown RBP21.07■□□□□ 0.96
UBE3D-204ENST00000430071 GNAI3P08754 354 aa21.06■□□□□ 0.96
UBE3D-204ENST00000430071 ATP2B3Q16720 1220 aa21.06■□□□□ 0.96
UBE3D-204ENST00000430071 SPDYE2Q495Y8 402 aa21.06■□□□□ 0.96
UBE3D-204ENST00000430071 SERPINA10Q9UK55 444 aa21.06■□□□□ 0.96
UBE3D-204ENST00000430071 MS4A1P11836 297 aa21.05■□□□□ 0.96
UBE3D-204ENST00000430071 NF2P35240 595 aa21.05■□□□□ 0.96
UBE3D-204ENST00000430071 PHKA1P46020 1223 aa21.05■□□□□ 0.96
UBE3D-204ENST00000430071 RASA3Q14644 834 aa21.05■□□□□ 0.96
UBE3D-204ENST00000430071 RNF186Q9NXI6 227 aa21.05■□□□□ 0.96
UBE3D-204ENST00000430071 MYO5AQ9Y4I1 1855 aaKnown RBP21.05■□□□□ 0.96
UBE3D-204ENST00000430071 LAMB1P07942 1786 aa21.04■□□□□ 0.96
UBE3D-204ENST00000430071 PNMA6EA0A0J9YXQ4 647 aa21.04■□□□□ 0.96
UBE3D-204ENST00000430071 SRGAP3O43295 1099 aa21.04■□□□□ 0.96
UBE3D-204ENST00000430071 MYO1BO43795 1136 aa21.04■□□□□ 0.96
UBE3D-204ENST00000430071 TRPA1O75762 1119 aa21.04■□□□□ 0.96
UBE3D-204ENST00000430071 CACNB3P54284 484 aa21.04■□□□□ 0.96
UBE3D-204ENST00000430071 PDE3AQ14432 1141 aa21.04■□□□□ 0.96
UBE3D-204ENST00000430071 LDLRAD1Q5T700 205 aa21.04■□□□□ 0.96
UBE3D-204ENST00000430071 ITPRIPQ8IWB1 547 aa21.04■□□□□ 0.96
UBE3D-204ENST00000430071 FBXO3Q9UK99 471 aa21.04■□□□□ 0.96
UBE3D-204ENST00000430071 TCP10L2B9ZVM9 353 aa21.03■□□□□ 0.96
UBE3D-204ENST00000430071 IL15P40933 162 aaPredicted RBP21.03■□□□□ 0.96
UBE3D-204ENST00000430071 TIMM10P62072 90 aa21.03■□□□□ 0.96
UBE3D-204ENST00000430071 MTX1Q13505 466 aa21.03■□□□□ 0.96
UBE3D-204ENST00000430071 CLMNQ96JQ2 1002 aa21.03■□□□□ 0.96
UBE3D-204ENST00000430071 TFCP2Q12800 502 aa21.02■□□□□ 0.96
UBE3D-204ENST00000430071 ARMC9Q7Z3E5 817 aa21.02■□□□□ 0.96
UBE3D-204ENST00000430071 TBC1D22AQ8WUA7 517 aa21.02■□□□□ 0.96
UBE3D-204ENST00000430071 COG6Q9Y2V7 657 aa21.02■□□□□ 0.96
UBE3D-204ENST00000430071 CA12O43570 354 aa21.01■□□□□ 0.95
UBE3D-204ENST00000430071 USP2O75604 605 aaPredicted RBP21.01■□□□□ 0.95
UBE3D-204ENST00000430071 TEPSINQ96N21 525 aa21.01■□□□□ 0.95
UBE3D-204ENST00000430071 HDAC5Q9UQL6 1122 aa21.01■□□□□ 0.95
UBE3D-204ENST00000430071 ZBTB7BO15156 539 aaPredicted RBP21■□□□□ 0.95
UBE3D-204ENST00000430071 GNAI2P04899 355 aa21■□□□□ 0.95
UBE3D-204ENST00000430071 PRDX5P30044 214 aa21■□□□□ 0.95
UBE3D-204ENST00000430071 MVPQ14764 893 aaKnown RBP21■□□□□ 0.95
UBE3D-204ENST00000430071 TMEM39BQ9GZU3 492 aa21■□□□□ 0.95
UBE3D-204ENST00000430071 C1orf115Q9H7X2 142 aa21■□□□□ 0.95
UBE3D-204ENST00000430071 SUPT16HQ9Y5B9 1047 aaKnown RBP21■□□□□ 0.95
UBE3D-204ENST00000430071 PPP2R3BQ9Y5P8 575 aa21■□□□□ 0.95
UBE3D-204ENST00000430071 HDLBPQ00341 1268 aaKnown RBP20.99■□□□□ 0.95
UBE3D-204ENST00000430071 MAP3K11Q16584 847 aa20.99■□□□□ 0.95
UBE3D-204ENST00000430071 APOBEC3HQ6NTF7 200 aaKnown RBP20.99■□□□□ 0.95
UBE3D-204ENST00000430071 TEKT1Q969V4 418 aa20.99■□□□□ 0.95
UBE3D-204ENST00000430071 DIXDC1Q155Q3 683 aa20.98■□□□□ 0.95
UBE3D-204ENST00000430071 GJA5P36382 358 aa20.97■□□□□ 0.95
UBE3D-204ENST00000430071 SPRYD7Q5W111 196 aa20.97■□□□□ 0.95
UBE3D-204ENST00000430071 CCDC102BQ68D86 513 aa20.97■□□□□ 0.95
UBE3D-204ENST00000430071 WDR66Q8TBY9 1149 aa20.97■□□□□ 0.95
UBE3D-204ENST00000430071 ZDHHC15Q96MV8 337 aa20.97■□□□□ 0.95
UBE3D-204ENST00000430071 A0A1B0GUL7 405 aa20.97■□□□□ 0.95
UBE3D-204ENST00000430071 SUPT20HL1Q3ZLR7 823 aa20.97■□□□□ 0.95
UBE3D-204ENST00000430071 XAGE2Q96GT9 111 aa20.97■□□□□ 0.95
UBE3D-204ENST00000430071 ABHD8Q96I13 439 aa20.97■□□□□ 0.95
UBE3D-204ENST00000430071 SAGE1Q9NXZ1 904 aa20.97■□□□□ 0.95
UBE3D-204ENST00000430071 PPP1R12BO60237 982 aaPredicted RBP20.96■□□□□ 0.95
UBE3D-204ENST00000430071 TBC1D8O95759 1140 aa20.96■□□□□ 0.95
UBE3D-204ENST00000430071 TM4SF4P48230 202 aa20.96■□□□□ 0.95
UBE3D-204ENST00000430071 RASGRF1Q13972 1273 aa20.96■□□□□ 0.95
UBE3D-204ENST00000430071 SLC10A4Q96EP9 437 aa20.96■□□□□ 0.95
UBE3D-204ENST00000430071 MRIQ9BWK5 157 aa20.96■□□□□ 0.95
UBE3D-204ENST00000430071 R3HDMLQ9H3Y0 253 aa20.96■□□□□ 0.95
UBE3D-204ENST00000430071 SUGT1Q9Y2Z0 365 aa20.96■□□□□ 0.95
UBE3D-204ENST00000430071 DAGLAQ9Y4D2 1042 aa20.96■□□□□ 0.95
UBE3D-204ENST00000430071 TNFAIP1Q13829 316 aa20.95■□□□□ 0.94
UBE3D-204ENST00000430071 HHIPL2Q6UWX4 724 aa20.95■□□□□ 0.94
UBE3D-204ENST00000430071 WNK4Q96J92 1243 aa20.95■□□□□ 0.94
UBE3D-204ENST00000430071 DDX19BQ9UMR2 479 aa20.95■□□□□ 0.94
UBE3D-204ENST00000430071 POLA2Q14181 598 aa20.94■□□□□ 0.94
UBE3D-204ENST00000430071 CNKSR2Q8WXI2 1034 aa20.94■□□□□ 0.94
UBE3D-204ENST00000430071 NEUROD6Q96NK8 337 aa20.94■□□□□ 0.94
UBE3D-204ENST00000430071 MCOLN1Q9GZU1 580 aa20.94■□□□□ 0.94
UBE3D-204ENST00000430071 GNL3LQ9NVN8 582 aaKnown RBP20.94■□□□□ 0.94
UBE3D-204ENST00000430071 DENND2AQ9ULE3 1009 aa20.94■□□□□ 0.94
UBE3D-204ENST00000430071 ATP8B2P98198 1209 aa20.93■□□□□ 0.94
UBE3D-204ENST00000430071 PI16Q6UXB8 463 aa20.93■□□□□ 0.94
UBE3D-204ENST00000430071 ZBTB40Q9NUA8 1239 aa20.93■□□□□ 0.94
UBE3D-204ENST00000430071 MAST3O60307 1309 aa20.92■□□□□ 0.94
UBE3D-204ENST00000430071 SALL1Q9NSC2 1324 aa20.92■□□□□ 0.94
UBE3D-204ENST00000430071 LDHBP07195 334 aaKnown RBP20.92■□□□□ 0.94
UBE3D-204ENST00000430071 IREB2P48200 963 aaKnown RBP20.92■□□□□ 0.94
UBE3D-204ENST00000430071 DGKZQ13574 1117 aa20.92■□□□□ 0.94
UBE3D-204ENST00000430071 CDC42EP5Q6NZY7 148 aa20.92■□□□□ 0.94
UBE3D-204ENST00000430071 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.92■□□□□ 0.94
UBE3D-204ENST00000430071 SSH3Q8TE77 659 aa20.92■□□□□ 0.94
UBE3D-204ENST00000430071 ELP3Q9H9T3 547 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 176.7 ms