RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 KLF18A0A0U1RQI7 1052 aa11.95□□□□□ -0.5
RPE-206ENST00000429921 UQCRFS1P1P0C7P4 283 aa11.95□□□□□ -0.5
RPE-206ENST00000429921 EVX2Q03828 476 aa11.95□□□□□ -0.5
RPE-206ENST00000429921 CHAF1AQ13111 956 aaPredicted RBP11.95□□□□□ -0.5
RPE-206ENST00000429921 TTC6Q86TZ1 520 aa11.95□□□□□ -0.5
RPE-206ENST00000429921 TXNRD3Q86VQ6 643 aa11.95□□□□□ -0.5
RPE-206ENST00000429921 VPS37DQ86XT2 251 aa11.95□□□□□ -0.5
RPE-206ENST00000429921 NSUN7Q8NE18 718 aaKnown RBP11.95□□□□□ -0.5
RPE-206ENST00000429921 SDR42E1Q8WUS8 393 aa11.95□□□□□ -0.5
RPE-206ENST00000429921 STRBPQ96SI9 672 aaKnown RBP11.95□□□□□ -0.5
RPE-206ENST00000429921 EPB41L4AQ9HCS5 686 aaPredicted RBP11.95□□□□□ -0.5
RPE-206ENST00000429921 RAI14Q9P0K7 980 aa11.95□□□□□ -0.5
RPE-206ENST00000429921 NARFQ9UHQ1 456 aa11.95□□□□□ -0.5
RPE-206ENST00000429921 CYP2D7A0A087X1C5 515 aa11.94□□□□□ -0.5
RPE-206ENST00000429921 UBE2Q2LH0YL09 131 aa11.94□□□□□ -0.5
RPE-206ENST00000429921 RFC4P35249 363 aa11.94□□□□□ -0.5
RPE-206ENST00000429921 DYNLL1P63167 89 aaKnown RBP11.94□□□□□ -0.5
RPE-206ENST00000429921 CAMK4Q16566 473 aa11.94□□□□□ -0.5
RPE-206ENST00000429921 RALYLQ86SE5 291 aaKnown RBP11.94□□□□□ -0.5
RPE-206ENST00000429921 CERKQ8TCT0 537 aa11.94□□□□□ -0.5
RPE-206ENST00000429921 QTRT2Q9H974 415 aaKnown RBP11.94□□□□□ -0.5
RPE-206ENST00000429921 BTAF1O14981 1849 aa11.94□□□□□ -0.5
RPE-206ENST00000429921 NEDD4P46934 1319 aa11.94□□□□□ -0.5
RPE-206ENST00000429921 PFKFB2O60825 505 aa11.94□□□□□ -0.5
RPE-206ENST00000429921 TRIM37O94972 964 aa11.94□□□□□ -0.5
RPE-206ENST00000429921 TTF1Q15361 905 aaPredicted RBP11.94□□□□□ -0.5
RPE-206ENST00000429921 LRRFIP1Q32MZ4 808 aaKnown RBP11.94□□□□□ -0.5
RPE-206ENST00000429921 GIMAP6Q6P9H5 292 aa11.94□□□□□ -0.5
RPE-206ENST00000429921 CHMP4CQ96CF2 233 aa11.94□□□□□ -0.5
RPE-206ENST00000429921 CDC5LQ99459 802 aaKnown RBP11.94□□□□□ -0.5
RPE-206ENST00000429921 ALDH8A1Q9H2A2 487 aaPredicted RBP11.94□□□□□ -0.5
RPE-206ENST00000429921 CTNNA3Q9UI47 895 aa11.94□□□□□ -0.5
RPE-206ENST00000429921 GOLGA8BA8MQT2 603 aa11.93□□□□□ -0.5
RPE-206ENST00000429921 CYP7A1P22680 504 aa11.93□□□□□ -0.5
RPE-206ENST00000429921 COL5A3P25940 1745 aaPredicted RBP11.93□□□□□ -0.5
RPE-206ENST00000429921 ZNF445P59923 1031 aa11.93□□□□□ -0.5
RPE-206ENST00000429921 MAP3K12Q12852 859 aa11.93□□□□□ -0.5
RPE-206ENST00000429921 AIFM3Q96NN9 605 aa11.93□□□□□ -0.5
RPE-206ENST00000429921 RRAGDQ9NQL2 400 aaPredicted RBP11.93□□□□□ -0.5
RPE-206ENST00000429921 SLC4A4Q9Y6R1 1079 aa11.93□□□□□ -0.5
RPE-206ENST00000429921 MINDY4BA8MYZ0 360 aa11.93□□□□□ -0.5
RPE-206ENST00000429921 ZSCAN25Q6NSZ9 544 aa11.93□□□□□ -0.5
RPE-206ENST00000429921 CLEC4GQ6UXB4 293 aa11.93□□□□□ -0.5
RPE-206ENST00000429921 MB21D2Q8IYB1 491 aaPredicted RBP11.93□□□□□ -0.5
RPE-206ENST00000429921 AK7Q96M32 723 aa11.93□□□□□ -0.5
RPE-206ENST00000429921 NLRP3Q96P20 1036 aa11.93□□□□□ -0.5
RPE-206ENST00000429921 MYH7P12883 1935 aa11.92□□□□□ -0.5
RPE-206ENST00000429921 MBD3O95983 291 aa11.92□□□□□ -0.5
RPE-206ENST00000429921 HMGB1P09429 215 aaKnown RBP11.92□□□□□ -0.5
RPE-206ENST00000429921 LIG1P18858 919 aa11.92□□□□□ -0.5
RPE-206ENST00000429921 TRAPPC3LQ5T215 181 aa11.92□□□□□ -0.5
RPE-206ENST00000429921 IFNL3Q8IZI9 196 aa11.92□□□□□ -0.5
RPE-206ENST00000429921 CCDC82Q8N4S0 544 aa11.92□□□□□ -0.5
RPE-206ENST00000429921 NCOA7Q8NI08 942 aa11.92□□□□□ -0.5
RPE-206ENST00000429921 FAM84BQ96KN1 310 aaPredicted RBP11.92□□□□□ -0.5
RPE-206ENST00000429921 CNTNAP4Q9C0A0 1308 aa11.92□□□□□ -0.5
RPE-206ENST00000429921 FDPSP14324 419 aaKnown RBP11.92□□□□□ -0.5
RPE-206ENST00000429921 MCM5P33992 734 aa11.92□□□□□ -0.5
RPE-206ENST00000429921 ADD1P35611 737 aaKnown RBP11.92□□□□□ -0.5
RPE-206ENST00000429921 TDO2P48775 406 aa11.92□□□□□ -0.5
RPE-206ENST00000429921 RPS8P62241 208 aaKnown RBP11.92□□□□□ -0.5
RPE-206ENST00000429921 UBE3CQ15386 1083 aa11.92□□□□□ -0.5
RPE-206ENST00000429921 LRSAM1Q6UWE0 723 aa11.92□□□□□ -0.5
RPE-206ENST00000429921 CMTR1Q8N1G2 835 aaKnown RBP11.92□□□□□ -0.5
RPE-206ENST00000429921 NAPBQ9H115 298 aa11.92□□□□□ -0.5
RPE-206ENST00000429921 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.91□□□□□ -0.5
RPE-206ENST00000429921 GSG1L2A8MUP6 293 aa11.91□□□□□ -0.5
RPE-206ENST00000429921 NFIXQ14938 502 aa11.91□□□□□ -0.5
RPE-206ENST00000429921 ZNF512BQ96KM6 892 aaPredicted RBP11.91□□□□□ -0.5
RPE-206ENST00000429921 HPS5Q9UPZ3 1129 aa11.91□□□□□ -0.5
RPE-206ENST00000429921 COL1A1P02452 1464 aaPredicted RBP11.91□□□□□ -0.5
RPE-206ENST00000429921 SF3B3Q15393 1217 aaKnown RBP11.91□□□□□ -0.5
RPE-206ENST00000429921 TPTE2Q6XPS3 522 aa11.91□□□□□ -0.5
RPE-206ENST00000429921 MICU3Q86XE3 530 aa11.91□□□□□ -0.5
RPE-206ENST00000429921 PHKBQ93100 1093 aa11.91□□□□□ -0.5
RPE-206ENST00000429921 BSDC1Q9NW68 430 aaPredicted RBP11.91□□□□□ -0.5
RPE-206ENST00000429921 ATP6V1DQ9Y5K8 247 aa11.91□□□□□ -0.5
RPE-206ENST00000429921 PRDM1O75626 825 aa11.9□□□□□ -0.5
RPE-206ENST00000429921 POLR3DP05423 398 aaPredicted RBP11.9□□□□□ -0.5
RPE-206ENST00000429921 PDCP20941 246 aa11.9□□□□□ -0.5
RPE-206ENST00000429921 UBE2HP62256 183 aa11.9□□□□□ -0.5
RPE-206ENST00000429921 KRT85P78386 507 aa11.9□□□□□ -0.5
RPE-206ENST00000429921 TRDNQ13061 729 aa11.9□□□□□ -0.5
RPE-206ENST00000429921 RESTQ13127 1097 aa11.9□□□□□ -0.5
RPE-206ENST00000429921 NFXL1Q6ZNB6 911 aa11.9□□□□□ -0.5
RPE-206ENST00000429921 ZNF384Q8TF68 577 aa11.9□□□□□ -0.5
RPE-206ENST00000429921 SPATA32Q96LK8 384 aa11.9□□□□□ -0.5
RPE-206ENST00000429921 SPATA31A6Q5VVP1 1343 aa11.9□□□□□ -0.5
RPE-206ENST00000429921 PATL2C9JE40 543 aaKnown RBP11.9□□□□□ -0.5
RPE-206ENST00000429921 SMARCC2Q8TAQ2 1214 aa11.9□□□□□ -0.5
RPE-206ENST00000429921 ZSWIM5Q9P217 1185 aa11.9□□□□□ -0.5
RPE-206ENST00000429921 RREB1Q92766 1687 aa11.9□□□□□ -0.51
RPE-206ENST00000429921 TM4SF1P30408 202 aa11.89□□□□□ -0.51
RPE-206ENST00000429921 CKAP2LQ8IYA6 745 aa11.89□□□□□ -0.51
RPE-206ENST00000429921 LEO1Q8WVC0 666 aaPredicted RBP11.89□□□□□ -0.51
RPE-206ENST00000429921 ANKIB1Q9P2G1 1089 aa11.89□□□□□ -0.51
RPE-206ENST00000429921 A0A087WWV3 80 aa11.89□□□□□ -0.51
RPE-206ENST00000429921 CDC27P30260 824 aa11.89□□□□□ -0.51
RPE-206ENST00000429921 CAVIN4Q5BKX8 364 aa11.89□□□□□ -0.51
RPE-206ENST00000429921 PGBD1Q96JS3 809 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms