RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 JARID2Q92833 1246 aaPredicted RBP11.48□□□□□ -0.57
NEDD1-203ENST00000429527 PDE1AP54750 535 aa11.48□□□□□ -0.57
NEDD1-203ENST00000429527 HDLBPQ00341 1268 aaKnown RBP11.48□□□□□ -0.57
NEDD1-203ENST00000429527 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.48□□□□□ -0.57
NEDD1-203ENST00000429527 CNTROBQ8N137 903 aa11.48□□□□□ -0.57
NEDD1-203ENST00000429527 H7C1D1 291 aa11.48□□□□□ -0.57
NEDD1-203ENST00000429527 HMMRO75330 724 aa11.48□□□□□ -0.57
NEDD1-203ENST00000429527 POTEIP0CG38 1075 aa11.48□□□□□ -0.57
NEDD1-203ENST00000429527 POTEJP0CG39 1038 aa11.48□□□□□ -0.57
NEDD1-203ENST00000429527 FKBP1BP68106 108 aa11.48□□□□□ -0.57
NEDD1-203ENST00000429527 PTPN12Q05209 780 aaKnown RBP11.48□□□□□ -0.57
NEDD1-203ENST00000429527 CD209Q9NNX6 404 aa11.48□□□□□ -0.57
NEDD1-203ENST00000429527 SNRKQ9NRH2 765 aa11.48□□□□□ -0.57
NEDD1-203ENST00000429527 ATG9AQ7Z3C6 839 aa11.47□□□□□ -0.57
NEDD1-203ENST00000429527 ZNF804AQ7Z570 1209 aa11.47□□□□□ -0.57
NEDD1-203ENST00000429527 PPP2R3BQ9Y5P8 575 aa11.47□□□□□ -0.57
NEDD1-203ENST00000429527 OTOFQ9HC10 1997 aa11.47□□□□□ -0.57
NEDD1-203ENST00000429527 POLA2Q14181 598 aa11.47□□□□□ -0.57
NEDD1-203ENST00000429527 UVSSAQ2YD98 709 aa11.47□□□□□ -0.57
NEDD1-203ENST00000429527 MICALL2Q8IY33 904 aa11.47□□□□□ -0.57
NEDD1-203ENST00000429527 SEMA3EO15041 775 aa11.47□□□□□ -0.57
NEDD1-203ENST00000429527 TRPM4Q8TD43 1214 aa11.47□□□□□ -0.57
NEDD1-203ENST00000429527 DBNDD1Q9H9R9 158 aa11.47□□□□□ -0.57
NEDD1-203ENST00000429527 EYA2O00167 538 aa11.46□□□□□ -0.57
NEDD1-203ENST00000429527 ESYT1Q9BSJ8 1104 aa11.46□□□□□ -0.57
NEDD1-203ENST00000429527 COL2A1P02458 1487 aaPredicted RBP11.46□□□□□ -0.58
NEDD1-203ENST00000429527 PDE8BO95263 885 aa11.46□□□□□ -0.58
NEDD1-203ENST00000429527 CDC37L1Q7L3B6 337 aa11.46□□□□□ -0.58
NEDD1-203ENST00000429527 MAP7D2Q96T17 732 aa11.46□□□□□ -0.58
NEDD1-203ENST00000429527 PDCL3Q9H2J4 239 aa11.46□□□□□ -0.58
NEDD1-203ENST00000429527 C1orf115Q9H7X2 142 aa11.46□□□□□ -0.58
NEDD1-203ENST00000429527 GPR108Q9NPR9 543 aa11.46□□□□□ -0.58
NEDD1-203ENST00000429527 GJA3Q9Y6H8 435 aa11.46□□□□□ -0.58
NEDD1-203ENST00000429527 RAD17O75943 681 aa11.45□□□□□ -0.58
NEDD1-203ENST00000429527 POLR2AP24928 1970 aaKnown RBP11.45□□□□□ -0.58
NEDD1-203ENST00000429527 ATP8B2P98198 1209 aa11.45□□□□□ -0.58
NEDD1-203ENST00000429527 LDHAL6AQ6ZMR3 332 aa11.45□□□□□ -0.58
NEDD1-203ENST00000429527 TXNRD3Q86VQ6 643 aa11.45□□□□□ -0.58
NEDD1-203ENST00000429527 AKAP11Q9UKA4 1901 aa11.45□□□□□ -0.58
NEDD1-203ENST00000429527 SASH1O94885 1247 aa11.45□□□□□ -0.58
NEDD1-203ENST00000429527 KIF4BQ2VIQ3 1234 aa11.45□□□□□ -0.58
NEDD1-203ENST00000429527 ZKSCAN5Q9Y2L8 839 aa11.45□□□□□ -0.58
NEDD1-203ENST00000429527 USP17L8P0C7I0 530 aa11.44□□□□□ -0.58
NEDD1-203ENST00000429527 UBTFL1P0CB47 393 aaPredicted RBP11.44□□□□□ -0.58
NEDD1-203ENST00000429527 PDIA4P13667 645 aaKnown RBP11.44□□□□□ -0.58
NEDD1-203ENST00000429527 PUM3Q15397 648 aaKnown RBP11.44□□□□□ -0.58
NEDD1-203ENST00000429527 DOK7Q18PE1 504 aa11.44□□□□□ -0.58
NEDD1-203ENST00000429527 REM2Q8IYK8 340 aaPredicted RBP11.44□□□□□ -0.58
NEDD1-203ENST00000429527 FAM84BQ96KN1 310 aaPredicted RBP11.44□□□□□ -0.58
NEDD1-203ENST00000429527 GZF1Q9H116 711 aaPredicted RBP11.44□□□□□ -0.58
NEDD1-203ENST00000429527 RBSNQ9H1K0 784 aa11.44□□□□□ -0.58
NEDD1-203ENST00000429527 MYOZ2Q9NPC6 264 aa11.44□□□□□ -0.58
NEDD1-203ENST00000429527 KCNQ5Q9NR82 932 aa11.44□□□□□ -0.58
NEDD1-203ENST00000429527 HSP90AA1P07900 732 aaKnown RBP11.44□□□□□ -0.58
NEDD1-203ENST00000429527 GTF2F1P35269 517 aaKnown RBP eCLIP11.44□□□□□ -0.58
NEDD1-203ENST00000429527 IL15P40933 162 aaPredicted RBP11.44□□□□□ -0.58
NEDD1-203ENST00000429527 MAP3K11Q16584 847 aa11.44□□□□□ -0.58
NEDD1-203ENST00000429527 CSPP1Q1MSJ5 1256 aa11.44□□□□□ -0.58
NEDD1-203ENST00000429527 CST9Q5W186 159 aa11.44□□□□□ -0.58
NEDD1-203ENST00000429527 SLC4A10Q6U841 1118 aa11.44□□□□□ -0.58
NEDD1-203ENST00000429527 SSH3Q8TE77 659 aa11.44□□□□□ -0.58
NEDD1-203ENST00000429527 DDX49Q9Y6V7 483 aaKnown RBP11.44□□□□□ -0.58
NEDD1-203ENST00000429527 RIMBP2O15034 1052 aa11.44□□□□□ -0.58
NEDD1-203ENST00000429527 KLRK1P26718 216 aa11.44□□□□□ -0.58
NEDD1-203ENST00000429527 TMED8Q6PL24 325 aaPredicted RBP11.44□□□□□ -0.58
NEDD1-203ENST00000429527 FAM184AQ8NB25 1140 aa11.44□□□□□ -0.58
NEDD1-203ENST00000429527 MEIS3Q99687 375 aa11.44□□□□□ -0.58
NEDD1-203ENST00000429527 SERPINA10Q9UK55 444 aa11.44□□□□□ -0.58
NEDD1-203ENST00000429527 TCHHQ07283 1943 aa11.43□□□□□ -0.58
NEDD1-203ENST00000429527 HSPA4P34932 840 aa11.43□□□□□ -0.58
NEDD1-203ENST00000429527 SPRYD3Q8NCJ5 442 aa11.43□□□□□ -0.58
NEDD1-203ENST00000429527 TBC1D22AQ8WUA7 517 aa11.43□□□□□ -0.58
NEDD1-203ENST00000429527 LPIN2Q92539 896 aa11.43□□□□□ -0.58
NEDD1-203ENST00000429527 ZNF512BQ96KM6 892 aaPredicted RBP11.43□□□□□ -0.58
NEDD1-203ENST00000429527 RFX7Q2KHR2 1363 aa11.43□□□□□ -0.58
NEDD1-203ENST00000429527 DDX60LQ5H9U9 1706 aaKnown RBP11.43□□□□□ -0.58
NEDD1-203ENST00000429527 SSC5DA1L4H1 1573 aa11.43□□□□□ -0.58
NEDD1-203ENST00000429527 RAB11FIP3O75154 756 aa11.43□□□□□ -0.58
NEDD1-203ENST00000429527 CHMLP26374 656 aa11.43□□□□□ -0.58
NEDD1-203ENST00000429527 MTERF4Q7Z6M4 381 aaKnown RBP11.43□□□□□ -0.58
NEDD1-203ENST00000429527 TRIM44Q96DX7 344 aaPredicted RBP11.43□□□□□ -0.58
NEDD1-203ENST00000429527 TTC14Q96N46 770 aa11.43□□□□□ -0.58
NEDD1-203ENST00000429527 GPR101Q96P66 508 aaPredicted RBP11.43□□□□□ -0.58
NEDD1-203ENST00000429527 CCDC171Q6TFL3 1326 aa11.43□□□□□ -0.58
NEDD1-203ENST00000429527 FKBP1CQ5VVH2 108 aa11.42□□□□□ -0.58
NEDD1-203ENST00000429527 OTUD7AQ8TE49 926 aaPredicted RBP11.42□□□□□ -0.58
NEDD1-203ENST00000429527 TMX3Q96JJ7 454 aa11.42□□□□□ -0.58
NEDD1-203ENST00000429527 ALDH8A1Q9H2A2 487 aaPredicted RBP11.42□□□□□ -0.58
NEDD1-203ENST00000429527 TMEM63CQ9P1W3 806 aa11.42□□□□□ -0.58
NEDD1-203ENST00000429527 CDK5RAP2Q96SN8 1893 aa11.42□□□□□ -0.58
NEDD1-203ENST00000429527 MAP4K4O95819 1239 aaPredicted RBP11.42□□□□□ -0.58
NEDD1-203ENST00000429527 APOBEC3FQ8IUX4 373 aaKnown RBP11.42□□□□□ -0.58
NEDD1-203ENST00000429527 CERS5Q8N5B7 392 aa11.42□□□□□ -0.58
NEDD1-203ENST00000429527 ZNF594Q96JF6 807 aaPredicted RBP11.42□□□□□ -0.58
NEDD1-203ENST00000429527 PUS3Q9BZE2 481 aaKnown RBP11.42□□□□□ -0.58
NEDD1-203ENST00000429527 CNNM1Q9NRU3 951 aa11.42□□□□□ -0.58
NEDD1-203ENST00000429527 WTIPA6NIX2 430 aaPredicted RBP11.42□□□□□ -0.58
NEDD1-203ENST00000429527 GNAI2P04899 355 aa11.42□□□□□ -0.58
NEDD1-203ENST00000429527 HIBADHP31937 336 aaKnown RBP11.41□□□□□ -0.58
NEDD1-203ENST00000429527 MAP2K2P36507 400 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms