RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 EXOSC10Q01780 885 aaKnown RBP14.43□□□□□ -0.1
CDH3-202ENST00000429102 ZMYM1Q5SVZ6 1142 aa14.43□□□□□ -0.1
CDH3-202ENST00000429102 AEBP2Q6ZN18 517 aaPredicted RBP14.43□□□□□ -0.1
CDH3-202ENST00000429102 CNNM3Q8NE01 707 aa14.43□□□□□ -0.1
CDH3-202ENST00000429102 MTMR7Q9Y216 660 aa14.43□□□□□ -0.1
CDH3-202ENST00000429102 ERBB3P21860 1342 aa14.43□□□□□ -0.1
CDH3-202ENST00000429102 METAP2P50579 478 aaKnown RBP eCLIP14.43□□□□□ -0.1
CDH3-202ENST00000429102 FEZ1Q99689 392 aa14.43□□□□□ -0.1
CDH3-202ENST00000429102 PXDNLA1KZ92 1463 aa14.43□□□□□ -0.1
CDH3-202ENST00000429102 TOP1P11387 765 aaKnown RBP14.42□□□□□ -0.1
CDH3-202ENST00000429102 GNG11P61952 73 aa14.42□□□□□ -0.1
CDH3-202ENST00000429102 LDHAL6AQ6ZMR3 332 aa14.42□□□□□ -0.1
CDH3-202ENST00000429102 FBXO18Q8NFZ0 1043 aa14.42□□□□□ -0.1
CDH3-202ENST00000429102 FOXO4P98177 505 aa14.42□□□□□ -0.1
CDH3-202ENST00000429102 CTDSPL2Q05D32 466 aa14.42□□□□□ -0.1
CDH3-202ENST00000429102 TRIM29Q14134 588 aa14.42□□□□□ -0.1
CDH3-202ENST00000429102 IRX2Q9BZI1 471 aaPredicted RBP14.42□□□□□ -0.1
CDH3-202ENST00000429102 AKAP12Q02952 1782 aa14.42□□□□□ -0.1
CDH3-202ENST00000429102 IL15P40933 162 aaPredicted RBP14.42□□□□□ -0.1
CDH3-202ENST00000429102 TSGA10IPQ3SY00 556 aa14.42□□□□□ -0.1
CDH3-202ENST00000429102 VPS37DQ86XT2 251 aa14.42□□□□□ -0.1
CDH3-202ENST00000429102 RNF216Q9NWF9 866 aaPredicted RBP14.42□□□□□ -0.1
CDH3-202ENST00000429102 SETD1AO15047 1707 aaKnown RBP14.42□□□□□ -0.1
CDH3-202ENST00000429102 PES1O00541 588 aaKnown RBP14.41□□□□□ -0.1
CDH3-202ENST00000429102 RBM6P78332 1123 aaKnown RBP14.41□□□□□ -0.1
CDH3-202ENST00000429102 OLFM4Q6UX06 510 aa14.41□□□□□ -0.1
CDH3-202ENST00000429102 PLBD2Q8NHP8 589 aa14.41□□□□□ -0.1
CDH3-202ENST00000429102 NCOA7Q8NI08 942 aa14.41□□□□□ -0.1
CDH3-202ENST00000429102 AFMP43652 599 aa14.41□□□□□ -0.1
CDH3-202ENST00000429102 LLPHQ9BRT6 129 aaKnown RBP14.41□□□□□ -0.1
CDH3-202ENST00000429102 LZTFL1Q9NQ48 299 aa14.41□□□□□ -0.1
CDH3-202ENST00000429102 HELLSQ9NRZ9 838 aa14.41□□□□□ -0.1
CDH3-202ENST00000429102 ERO1AQ96HE7 468 aa14.41□□□□□ -0.1
CDH3-202ENST00000429102 MROH7-TTC4A0A0A0MT08 1334 aa14.4□□□□□ -0.1
CDH3-202ENST00000429102 GRIN1Q05586 938 aa14.4□□□□□ -0.1
CDH3-202ENST00000429102 LONRF3Q496Y0 759 aa14.4□□□□□ -0.1
CDH3-202ENST00000429102 KRT40Q6A162 431 aa14.4□□□□□ -0.1
CDH3-202ENST00000429102 KCNG4Q8TDN1 519 aa14.4□□□□□ -0.1
CDH3-202ENST00000429102 NWD1Q149M9 1564 aa14.4□□□□□ -0.1
CDH3-202ENST00000429102 NYAP1Q6ZVC0 841 aa14.4□□□□□ -0.1
CDH3-202ENST00000429102 PIK3C2AO00443 1686 aa14.4□□□□□ -0.1
CDH3-202ENST00000429102 DHX16O60231 1041 aaKnown RBP14.4□□□□□ -0.1
CDH3-202ENST00000429102 CLCN6P51797 869 aa14.4□□□□□ -0.1
CDH3-202ENST00000429102 GSDMDP57764 484 aa14.4□□□□□ -0.1
CDH3-202ENST00000429102 UTP14CQ5TAP6 766 aaKnown RBP14.4□□□□□ -0.1
CDH3-202ENST00000429102 GPIHBP1Q8IV16 184 aa14.4□□□□□ -0.1
CDH3-202ENST00000429102 PLCD3Q8N3E9 789 aa14.4□□□□□ -0.1
CDH3-202ENST00000429102 MIGA1Q8NAN2 632 aa14.4□□□□□ -0.1
CDH3-202ENST00000429102 DSCC1Q9BVC3 393 aa14.4□□□□□ -0.1
CDH3-202ENST00000429102 RTEL1Q9NZ71 1219 aa14.4□□□□□ -0.1
CDH3-202ENST00000429102 PCDHA5Q9Y5H7 936 aa14.4□□□□□ -0.1
CDH3-202ENST00000429102 PDIA4P13667 645 aaKnown RBP14.39□□□□□ -0.11
CDH3-202ENST00000429102 CDC27P30260 824 aa14.39□□□□□ -0.11
CDH3-202ENST00000429102 CYB5R4Q7L1T6 521 aa14.39□□□□□ -0.11
CDH3-202ENST00000429102 ZNF446Q9NWS9 450 aa14.39□□□□□ -0.11
CDH3-202ENST00000429102 PUF60Q9UHX1 559 aaKnown RBP14.39□□□□□ -0.11
CDH3-202ENST00000429102 GOLGA8AA7E2F4 631 aa14.39□□□□□ -0.11
CDH3-202ENST00000429102 BTBD18B2RXH4 712 aa14.39□□□□□ -0.11
CDH3-202ENST00000429102 NEMFO60524 1076 aa14.39□□□□□ -0.11
CDH3-202ENST00000429102 ANTXR2P58335 489 aa14.39□□□□□ -0.11
CDH3-202ENST00000429102 IFIT5Q13325 482 aaKnown RBP14.39□□□□□ -0.11
CDH3-202ENST00000429102 NEK11Q8NG66 645 aa14.39□□□□□ -0.11
CDH3-202ENST00000429102 HINFPQ9BQA5 517 aa14.39□□□□□ -0.11
CDH3-202ENST00000429102 IFIT3O14879 490 aaKnown RBP14.39□□□□□ -0.11
CDH3-202ENST00000429102 TFRCP02786 760 aaKnown RBP14.39□□□□□ -0.11
CDH3-202ENST00000429102 IARSP41252 1262 aaKnown RBP14.39□□□□□ -0.11
CDH3-202ENST00000429102 NLRP12P59046 1061 aa14.39□□□□□ -0.11
CDH3-202ENST00000429102 TMEM67Q5HYA8 995 aa14.39□□□□□ -0.11
CDH3-202ENST00000429102 SARM1Q6SZW1 724 aa14.39□□□□□ -0.11
CDH3-202ENST00000429102 SMYD4Q8IYR2 804 aaPredicted RBP14.39□□□□□ -0.11
CDH3-202ENST00000429102 NOL10Q9BSC4 688 aaKnown RBP14.39□□□□□ -0.11
CDH3-202ENST00000429102 UTYO14607 1347 aa14.38□□□□□ -0.11
CDH3-202ENST00000429102 FAM208AQ9UK61 1670 aaKnown RBP14.38□□□□□ -0.11
CDH3-202ENST00000429102 CAVIN2O95810 425 aa14.38□□□□□ -0.11
CDH3-202ENST00000429102 ATF3P18847 181 aa14.38□□□□□ -0.11
CDH3-202ENST00000429102 KIF23Q02241 960 aaPredicted RBP14.38□□□□□ -0.11
CDH3-202ENST00000429102 EEF2KMTQ96G04 330 aa14.38□□□□□ -0.11
CDH3-202ENST00000429102 ZNF274Q96GC6 653 aaPredicted RBP14.38□□□□□ -0.11
CDH3-202ENST00000429102 GOLGB1Q14789 3259 aaKnown RBP14.38□□□□□ -0.11
CDH3-202ENST00000429102 MINDY4BA8MYZ0 360 aa14.38□□□□□ -0.11
CDH3-202ENST00000429102 POLR2DO15514 142 aaKnown RBP14.38□□□□□ -0.11
CDH3-202ENST00000429102 SLFN14P0C7P3 912 aa14.38□□□□□ -0.11
CDH3-202ENST00000429102 PDE4BQ07343 736 aa14.38□□□□□ -0.11
CDH3-202ENST00000429102 TMCO3Q6UWJ1 677 aa14.38□□□□□ -0.11
CDH3-202ENST00000429102 HPS5Q9UPZ3 1129 aa14.38□□□□□ -0.11
CDH3-202ENST00000429102 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.38□□□□□ -0.11
CDH3-202ENST00000429102 RGPD1P0DJD0 1748 aa14.38□□□□□ -0.11
CDH3-202ENST00000429102 GUCY1A2P33402 732 aa14.38□□□□□ -0.11
CDH3-202ENST00000429102 MTF1Q14872 753 aa14.38□□□□□ -0.11
CDH3-202ENST00000429102 TBC1D10CQ8IV04 446 aa14.38□□□□□ -0.11
CDH3-202ENST00000429102 DCAF5Q96JK2 942 aa14.38□□□□□ -0.11
CDH3-202ENST00000429102 PRDM11Q9NQV5 511 aa14.38□□□□□ -0.11
CDH3-202ENST00000429102 TBC1D2BQ9UPU7 963 aa14.38□□□□□ -0.11
CDH3-202ENST00000429102 NR5A1Q13285 461 aa14.37□□□□□ -0.11
CDH3-202ENST00000429102 TERF2Q15554 542 aa14.37□□□□□ -0.11
CDH3-202ENST00000429102 CPLX2Q6PUV4 134 aaKnown RBP14.37□□□□□ -0.11
CDH3-202ENST00000429102 SHC4Q6S5L8 630 aa14.37□□□□□ -0.11
CDH3-202ENST00000429102 AIDAQ96BJ3 306 aa14.37□□□□□ -0.11
CDH3-202ENST00000429102 EVCP57679 992 aa14.37□□□□□ -0.11
CDH3-202ENST00000429102 USP49Q70CQ1 688 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms