RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 XAGE3Q8WTP9 111 aa16.51■□□□□ 0.23
SYNGAP1-203ENST00000428982 CBX8Q9HC52 389 aa16.51■□□□□ 0.23
SYNGAP1-203ENST00000428982 ORC3Q9UBD5 711 aaPredicted RBP16.51■□□□□ 0.23
SYNGAP1-203ENST00000428982 AK2P54819 239 aa16.51■□□□□ 0.23
SYNGAP1-203ENST00000428982 KSR2Q6VAB6 950 aa16.51■□□□□ 0.23
SYNGAP1-203ENST00000428982 COPS6Q7L5N1 327 aa16.51■□□□□ 0.23
SYNGAP1-203ENST00000428982 ZSWIM4Q9H7M6 989 aa16.51■□□□□ 0.23
SYNGAP1-203ENST00000428982 DDX21Q9NR30 783 aaKnown RBP eCLIP16.51■□□□□ 0.23
SYNGAP1-203ENST00000428982 POTEB2H3BUK9 544 aa16.5■□□□□ 0.23
SYNGAP1-203ENST00000428982 DNAJC25Q9H1X3 360 aa16.5■□□□□ 0.23
SYNGAP1-203ENST00000428982 PLEKHA4Q9H4M7 779 aa16.5■□□□□ 0.23
SYNGAP1-203ENST00000428982 USP21Q9UK80 565 aa16.5■□□□□ 0.23
SYNGAP1-203ENST00000428982 CTAGE5O15320 804 aa16.5■□□□□ 0.23
SYNGAP1-203ENST00000428982 H2AFXP16104 143 aaPredicted RBP16.5■□□□□ 0.23
SYNGAP1-203ENST00000428982 GPR161Q8N6U8 529 aaKnown RBP16.5■□□□□ 0.23
SYNGAP1-203ENST00000428982 CEP112Q8N8E3 955 aa16.5■□□□□ 0.23
SYNGAP1-203ENST00000428982 GOLGA1Q92805 767 aa16.5■□□□□ 0.23
SYNGAP1-203ENST00000428982 CABS1Q96KC9 395 aa16.5■□□□□ 0.23
SYNGAP1-203ENST00000428982 TMX4Q9H1E5 349 aaPredicted RBP16.5■□□□□ 0.23
SYNGAP1-203ENST00000428982 ATP10DQ9P241 1426 aa16.5■□□□□ 0.23
SYNGAP1-203ENST00000428982 FRMD3A2A2Y4 597 aa16.5■□□□□ 0.23
SYNGAP1-203ENST00000428982 RNF187Q5TA31 235 aaPredicted RBP16.5■□□□□ 0.23
SYNGAP1-203ENST00000428982 TMEM87AQ8NBN3 555 aa16.5■□□□□ 0.23
SYNGAP1-203ENST00000428982 CAPN7Q9Y6W3 813 aa16.5■□□□□ 0.23
SYNGAP1-203ENST00000428982 KDRP35968 1356 aa16.49■□□□□ 0.23
SYNGAP1-203ENST00000428982 EFCAB8A8MWE9 144 aa16.49■□□□□ 0.23
SYNGAP1-203ENST00000428982 ZSCAN12O43309 604 aa16.49■□□□□ 0.23
SYNGAP1-203ENST00000428982 SYT1P21579 422 aa16.49■□□□□ 0.23
SYNGAP1-203ENST00000428982 WWC2Q6AWC2 1192 aa16.49■□□□□ 0.23
SYNGAP1-203ENST00000428982 PRPF38AQ8NAV1 312 aaKnown RBP16.49■□□□□ 0.23
SYNGAP1-203ENST00000428982 TEX11Q8IYF3 940 aa16.49■□□□□ 0.23
SYNGAP1-203ENST00000428982 ARMC2Q8NEN0 867 aa16.49■□□□□ 0.23
SYNGAP1-203ENST00000428982 ZBTB3Q9H5J0 574 aa16.49■□□□□ 0.23
SYNGAP1-203ENST00000428982 FMN2Q9NZ56 1722 aa16.49■□□□□ 0.23
SYNGAP1-203ENST00000428982 SNX14Q9Y5W7 946 aa16.49■□□□□ 0.23
SYNGAP1-203ENST00000428982 PPFIA4O75335 1185 aa16.49■□□□□ 0.23
SYNGAP1-203ENST00000428982 PDE11AQ9HCR9 933 aa16.49■□□□□ 0.23
SYNGAP1-203ENST00000428982 CHD2O14647 1828 aaKnown RBP16.48■□□□□ 0.23
SYNGAP1-203ENST00000428982 MICALCLQ6ZW33 695 aa16.48■□□□□ 0.23
SYNGAP1-203ENST00000428982 CCDC150Q8NCX0 1101 aa16.48■□□□□ 0.23
SYNGAP1-203ENST00000428982 PNMA6EA0A0J9YXQ4 647 aa16.48■□□□□ 0.23
SYNGAP1-203ENST00000428982 KINO60870 393 aaKnown RBP16.48■□□□□ 0.23
SYNGAP1-203ENST00000428982 FAM98CQ17RN3 349 aaKnown RBP16.48■□□□□ 0.23
SYNGAP1-203ENST00000428982 RSRC1Q96IZ7 334 aaKnown RBP16.48■□□□□ 0.23
SYNGAP1-203ENST00000428982 AK9Q5TCS8 1911 aa16.48■□□□□ 0.23
SYNGAP1-203ENST00000428982 KIF1AQ12756 1690 aa16.48■□□□□ 0.23
SYNGAP1-203ENST00000428982 ZNF496Q96IT1 587 aaPredicted RBP16.48■□□□□ 0.23
SYNGAP1-203ENST00000428982 PHAXQ9H814 394 aaKnown RBP16.48■□□□□ 0.23
SYNGAP1-203ENST00000428982 TMCO5BA8MYB1 307 aa16.47■□□□□ 0.23
SYNGAP1-203ENST00000428982 AFAP1L1Q8TED9 768 aa16.47■□□□□ 0.23
SYNGAP1-203ENST00000428982 TBC1D22AQ8WUA7 517 aa16.47■□□□□ 0.23
SYNGAP1-203ENST00000428982 RUFY1Q96T51 708 aa16.47■□□□□ 0.23
SYNGAP1-203ENST00000428982 NCAPD2Q15021 1401 aa16.47■□□□□ 0.23
SYNGAP1-203ENST00000428982 NUP133Q8WUM0 1156 aa16.47■□□□□ 0.23
SYNGAP1-203ENST00000428982 ZNF652Q9Y2D9 606 aa16.47■□□□□ 0.23
SYNGAP1-203ENST00000428982 USP16Q9Y5T5 823 aa16.47■□□□□ 0.23
SYNGAP1-203ENST00000428982 GOLGA6L7A0A1B0GV03 622 aa16.47■□□□□ 0.23
SYNGAP1-203ENST00000428982 PPP2R3AQ06190 1150 aa16.47■□□□□ 0.23
SYNGAP1-203ENST00000428982 PSMD2Q13200 908 aa16.47■□□□□ 0.23
SYNGAP1-203ENST00000428982 CNNM3Q8NE01 707 aa16.47■□□□□ 0.23
SYNGAP1-203ENST00000428982 KCNQ3O43525 872 aa16.46■□□□□ 0.23
SYNGAP1-203ENST00000428982 GSCP56915 257 aaPredicted RBP16.46■□□□□ 0.23
SYNGAP1-203ENST00000428982 GNG11P61952 73 aa16.46■□□□□ 0.23
SYNGAP1-203ENST00000428982 CEP57L1Q8IYX8 460 aa16.46■□□□□ 0.23
SYNGAP1-203ENST00000428982 A0A087WZG4 1122 aa16.46■□□□□ 0.23
SYNGAP1-203ENST00000428982 NBPF10Q6P3W6 841 aaKnown RBP16.46■□□□□ 0.23
SYNGAP1-203ENST00000428982 CRACR2AQ9BSW2 395 aa16.46■□□□□ 0.23
SYNGAP1-203ENST00000428982 USP27XA6NNY8 438 aa16.46■□□□□ 0.23
SYNGAP1-203ENST00000428982 GIGYF1O75420 1035 aaPredicted RBP16.46■□□□□ 0.23
SYNGAP1-203ENST00000428982 ECM2O94769 699 aaPredicted RBP16.46■□□□□ 0.23
SYNGAP1-203ENST00000428982 TMC6Q7Z403 805 aa16.46■□□□□ 0.23
SYNGAP1-203ENST00000428982 PALD1Q9ULE6 856 aa16.46■□□□□ 0.23
SYNGAP1-203ENST00000428982 MON2Q7Z3U7 1717 aa16.45■□□□□ 0.22
SYNGAP1-203ENST00000428982 HNRNPH1P31943 449 aaKnown RBP16.45■□□□□ 0.22
SYNGAP1-203ENST00000428982 CC2D1AQ6P1N0 951 aaPredicted RBP16.45■□□□□ 0.22
SYNGAP1-203ENST00000428982 LINS1Q8NG48 757 aa16.45■□□□□ 0.22
SYNGAP1-203ENST00000428982 FAM210AQ96ND0 272 aa16.45■□□□□ 0.22
SYNGAP1-203ENST00000428982 ZSCAN16Q9H4T2 348 aaPredicted RBP16.45■□□□□ 0.22
SYNGAP1-203ENST00000428982 FAN1Q9Y2M0 1017 aa16.45■□□□□ 0.22
SYNGAP1-203ENST00000428982 U3KPZ7 1027 aaPredicted RBP16.45■□□□□ 0.22
SYNGAP1-203ENST00000428982 CCDC57Q2TAC2 916 aa16.45■□□□□ 0.22
SYNGAP1-203ENST00000428982 CERKQ8TCT0 537 aa16.45■□□□□ 0.22
SYNGAP1-203ENST00000428982 NEUROD6Q96NK8 337 aa16.45■□□□□ 0.22
SYNGAP1-203ENST00000428982 DACT1Q9NYF0 836 aa16.45■□□□□ 0.22
SYNGAP1-203ENST00000428982 SETD1AO15047 1707 aaKnown RBP16.45■□□□□ 0.22
SYNGAP1-203ENST00000428982 CAND2O75155 1236 aa16.45■□□□□ 0.22
SYNGAP1-203ENST00000428982 PIP4K2AP48426 406 aaPredicted RBP16.45■□□□□ 0.22
SYNGAP1-203ENST00000428982 DNM1Q05193 864 aaKnown RBP16.45■□□□□ 0.22
SYNGAP1-203ENST00000428982 SCLT1Q96NL6 688 aa16.45■□□□□ 0.22
SYNGAP1-203ENST00000428982 SIL1Q9H173 461 aa16.45■□□□□ 0.22
SYNGAP1-203ENST00000428982 LONRF2Q1L5Z9 754 aa16.44■□□□□ 0.22
SYNGAP1-203ENST00000428982 USP44Q9H0E7 712 aa16.44■□□□□ 0.22
SYNGAP1-203ENST00000428982 ATP5J2-PTCD1G3V325 749 aa16.44■□□□□ 0.22
SYNGAP1-203ENST00000428982 CHUKO15111 745 aa16.44■□□□□ 0.22
SYNGAP1-203ENST00000428982 RUFY3Q7L099 469 aa16.44■□□□□ 0.22
SYNGAP1-203ENST00000428982 BSDC1Q9NW68 430 aaPredicted RBP16.44■□□□□ 0.22
SYNGAP1-203ENST00000428982 GCFC2P16383 781 aaKnown RBP16.44■□□□□ 0.22
SYNGAP1-203ENST00000428982 CEP85LQ5SZL2 805 aa16.44■□□□□ 0.22
SYNGAP1-203ENST00000428982 CWC25Q9NXE8 425 aaPredicted RBP16.44■□□□□ 0.22
SYNGAP1-203ENST00000428982 RBM8AQ9Y5S9 174 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms