RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 MAGEB6Q8N7X4 407 aa13.06□□□□□ -0.32
CRIM1-204ENST00000428774 WDR66Q8TBY9 1149 aa13.06□□□□□ -0.32
CRIM1-204ENST00000428774 ZNF384Q8TF68 577 aa13.06□□□□□ -0.32
CRIM1-204ENST00000428774 TAOK3Q9H2K8 898 aa13.06□□□□□ -0.32
CRIM1-204ENST00000428774 DBNDD1Q9H9R9 158 aa13.06□□□□□ -0.32
CRIM1-204ENST00000428774 LRP2BPQ9P2M1 347 aa13.06□□□□□ -0.32
CRIM1-204ENST00000428774 PPIP5K2O43314 1243 aa13.05□□□□□ -0.32
CRIM1-204ENST00000428774 RBM25P49756 843 aaKnown RBP13.05□□□□□ -0.32
CRIM1-204ENST00000428774 ADGRA1Q86SQ6 560 aa13.05□□□□□ -0.32
CRIM1-204ENST00000428774 PUS7LQ9H0K6 701 aaKnown RBP13.05□□□□□ -0.32
CRIM1-204ENST00000428774 RAI14Q9P0K7 980 aa13.05□□□□□ -0.32
CRIM1-204ENST00000428774 UTRNP46939 3433 aa13.04□□□□□ -0.32
CRIM1-204ENST00000428774 GTF2IP78347 998 aa13.04□□□□□ -0.32
CRIM1-204ENST00000428774 ERICH6Q7L0X2 663 aa13.04□□□□□ -0.32
CRIM1-204ENST00000428774 ZGPATQ8N5A5 531 aaKnown RBP13.04□□□□□ -0.32
CRIM1-204ENST00000428774 NSUN4Q96CB9 384 aaKnown RBP13.04□□□□□ -0.32
CRIM1-204ENST00000428774 LTBP3Q9NS15 1303 aa13.04□□□□□ -0.32
CRIM1-204ENST00000428774 YDJCA8MPS7 323 aa13.03□□□□□ -0.32
CRIM1-204ENST00000428774 FOXP2O15409 715 aa13.03□□□□□ -0.32
CRIM1-204ENST00000428774 GPAA1O43292 621 aa13.03□□□□□ -0.32
CRIM1-204ENST00000428774 EPB41L2O43491 1005 aaKnown RBP13.03□□□□□ -0.32
CRIM1-204ENST00000428774 GRIN3BO60391 1043 aa13.03□□□□□ -0.32
CRIM1-204ENST00000428774 CYP7A1P22680 504 aa13.03□□□□□ -0.32
CRIM1-204ENST00000428774 IARSP41252 1262 aaKnown RBP13.03□□□□□ -0.32
CRIM1-204ENST00000428774 MECOMQ03112 1051 aa13.03□□□□□ -0.32
CRIM1-204ENST00000428774 VPS53Q5VIR6 699 aa13.03□□□□□ -0.32
CRIM1-204ENST00000428774 CERS5Q8N5B7 392 aa13.03□□□□□ -0.32
CRIM1-204ENST00000428774 FBXW7Q969H0 707 aa13.03□□□□□ -0.32
CRIM1-204ENST00000428774 PALD1Q9ULE6 856 aa13.03□□□□□ -0.32
CRIM1-204ENST00000428774 BAZ2AQ9UIF9 1905 aaKnown RBP13.03□□□□□ -0.32
CRIM1-204ENST00000428774 G3V3G9 751 aa13.02□□□□□ -0.33
CRIM1-204ENST00000428774 MBD4O95243 580 aa13.02□□□□□ -0.33
CRIM1-204ENST00000428774 LDHBP07195 334 aaKnown RBP13.02□□□□□ -0.33
CRIM1-204ENST00000428774 HSPA4P34932 840 aa13.02□□□□□ -0.33
CRIM1-204ENST00000428774 MFSD14BQ5SR56 506 aa13.02□□□□□ -0.33
CRIM1-204ENST00000428774 DCAF8Q5TAQ9 597 aa13.02□□□□□ -0.33
CRIM1-204ENST00000428774 C9orf131Q5VYM1 1079 aa13.02□□□□□ -0.33
CRIM1-204ENST00000428774 SPTY2D1Q68D10 685 aaPredicted RBP13.02□□□□□ -0.33
CRIM1-204ENST00000428774 NAA16Q6N069 864 aaPredicted RBP13.02□□□□□ -0.33
CRIM1-204ENST00000428774 KIAA1211Q6ZU35 1233 aa13.02□□□□□ -0.33
CRIM1-204ENST00000428774 PODNQ7Z5L7 613 aa13.02□□□□□ -0.33
CRIM1-204ENST00000428774 DZIP1Q86YF9 867 aaKnown RBP13.02□□□□□ -0.33
CRIM1-204ENST00000428774 LCORLQ8N3X6 602 aa13.02□□□□□ -0.33
CRIM1-204ENST00000428774 TBC1D22AQ8WUA7 517 aa13.02□□□□□ -0.33
CRIM1-204ENST00000428774 KIF2CQ99661 725 aa13.02□□□□□ -0.33
CRIM1-204ENST00000428774 MXD3Q9BW11 206 aa13.02□□□□□ -0.33
CRIM1-204ENST00000428774 KCNQ5Q9NR82 932 aa13.02□□□□□ -0.33
CRIM1-204ENST00000428774 RNF181Q9P0P0 153 aa13.02□□□□□ -0.33
CRIM1-204ENST00000428774 RBM8AQ9Y5S9 174 aaKnown RBP13.02□□□□□ -0.33
CRIM1-204ENST00000428774 LARGE2Q8N3Y3 721 aa13.01□□□□□ -0.33
CRIM1-204ENST00000428774 MIGA1Q8NAN2 632 aa13.01□□□□□ -0.33
CRIM1-204ENST00000428774 MAP4K1Q92918 833 aa13.01□□□□□ -0.33
CRIM1-204ENST00000428774 DSCC1Q9BVC3 393 aa13.01□□□□□ -0.33
CRIM1-204ENST00000428774 ARMT1Q9H993 441 aa13.01□□□□□ -0.33
CRIM1-204ENST00000428774 MROH7-TTC4A0A0A0MT08 1334 aa13□□□□□ -0.33
CRIM1-204ENST00000428774 ZNF541Q9H0D2 1346 aa13□□□□□ -0.33
CRIM1-204ENST00000428774 IGSF3O75054 1194 aa13□□□□□ -0.33
CRIM1-204ENST00000428774 HSPD1P10809 573 aaKnown RBP13□□□□□ -0.33
CRIM1-204ENST00000428774 LMNB1P20700 586 aa13□□□□□ -0.33
CRIM1-204ENST00000428774 MCCP23508 829 aa13□□□□□ -0.33
CRIM1-204ENST00000428774 DIXDC1Q155Q3 683 aa13□□□□□ -0.33
CRIM1-204ENST00000428774 DACT2Q5SW24 774 aa13□□□□□ -0.33
CRIM1-204ENST00000428774 TTLL5Q6EMB2 1281 aa13□□□□□ -0.33
CRIM1-204ENST00000428774 AIDAQ96BJ3 306 aa13□□□□□ -0.33
CRIM1-204ENST00000428774 RIOK1Q9BRS2 568 aaKnown RBP13□□□□□ -0.33
CRIM1-204ENST00000428774 VPS33BQ9H267 617 aa13□□□□□ -0.33
CRIM1-204ENST00000428774 GAKO14976 1311 aa12.99□□□□□ -0.33
CRIM1-204ENST00000428774 FKBP1AP62942 108 aaKnown RBP12.99□□□□□ -0.33
CRIM1-204ENST00000428774 DYNLL1P63167 89 aaKnown RBP12.99□□□□□ -0.33
CRIM1-204ENST00000428774 NECTIN1Q15223 517 aa12.99□□□□□ -0.33
CRIM1-204ENST00000428774 STRIP1Q5VSL9 837 aa12.99□□□□□ -0.33
CRIM1-204ENST00000428774 TMED8Q6PL24 325 aaPredicted RBP12.99□□□□□ -0.33
CRIM1-204ENST00000428774 NIM1KQ8IY84 436 aa12.99□□□□□ -0.33
CRIM1-204ENST00000428774 IL17RAQ96F46 866 aa12.99□□□□□ -0.33
CRIM1-204ENST00000428774 STRBPQ96SI9 672 aaKnown RBP12.99□□□□□ -0.33
CRIM1-204ENST00000428774 EPB41L4AQ9HCS5 686 aaPredicted RBP12.99□□□□□ -0.33
CRIM1-204ENST00000428774 MYH1P12882 1939 aa12.98□□□□□ -0.33
CRIM1-204ENST00000428774 MAGEB6P1A0A0J9YX57 407 aa12.98□□□□□ -0.33
CRIM1-204ENST00000428774 USP17L3A6NCW0 530 aa12.98□□□□□ -0.33
CRIM1-204ENST00000428774 USP17L4A6NCW7 530 aa12.98□□□□□ -0.33
CRIM1-204ENST00000428774 DCAF8L1A6NGE4 600 aa12.98□□□□□ -0.33
CRIM1-204ENST00000428774 SLC27A2O14975 620 aa12.98□□□□□ -0.33
CRIM1-204ENST00000428774 PRKAB2O43741 272 aa12.98□□□□□ -0.33
CRIM1-204ENST00000428774 CREB3L3Q68CJ9 461 aa12.98□□□□□ -0.33
CRIM1-204ENST00000428774 USP17L1Q7RTZ2 530 aa12.98□□□□□ -0.33
CRIM1-204ENST00000428774 RASEFQ8IZ41 740 aa12.98□□□□□ -0.33
CRIM1-204ENST00000428774 KCNB2Q92953 911 aa12.98□□□□□ -0.33
CRIM1-204ENST00000428774 SUGT1Q9Y2Z0 365 aa12.98□□□□□ -0.33
CRIM1-204ENST00000428774 SNX14Q9Y5W7 946 aa12.98□□□□□ -0.33
CRIM1-204ENST00000428774 TAF6LQ9Y6J9 622 aa12.98□□□□□ -0.33
CRIM1-204ENST00000428774 U3KPZ7 1027 aaPredicted RBP12.98□□□□□ -0.33
CRIM1-204ENST00000428774 RPAP1Q9BWH6 1393 aaPredicted RBP12.97□□□□□ -0.33
CRIM1-204ENST00000428774 ZMYM6O95789 1325 aa12.97□□□□□ -0.33
CRIM1-204ENST00000428774 F8W031 263 aaPredicted RBP12.97□□□□□ -0.33
CRIM1-204ENST00000428774 ANP32AP39687 249 aaKnown RBP12.97□□□□□ -0.33
CRIM1-204ENST00000428774 GSTO1P78417 241 aa12.97□□□□□ -0.33
CRIM1-204ENST00000428774 AATFQ9NY61 560 aaKnown RBP eCLIP12.97□□□□□ -0.33
CRIM1-204ENST00000428774 DAGLAQ9Y4D2 1042 aa12.97□□□□□ -0.33
CRIM1-204ENST00000428774 SIPA1L1O43166 1804 aa12.97□□□□□ -0.33
CRIM1-204ENST00000428774 PSMD14O00487 310 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms