RNA–Protein interactions for RNA: ENST00000427779.5

PSMD4-203, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 3

Gene PSMD4, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-203ENST00000427779 FAM84BQ96KN1 310 aaPredicted RBP21.4■■□□□ 1.02
PSMD4-203ENST00000427779 TEPSINQ96N21 525 aa21.4■■□□□ 1.02
PSMD4-203ENST00000427779 TMEM106CQ9BVX2 250 aa21.4■■□□□ 1.02
PSMD4-203ENST00000427779 ZFYVE28Q9HCC9 887 aa21.4■■□□□ 1.02
PSMD4-203ENST00000427779 CSADQ9Y600 493 aa21.4■■□□□ 1.02
PSMD4-203ENST00000427779 MKI67P46013 3256 aaKnown RBP21.4■■□□□ 1.02
PSMD4-203ENST00000427779 MROH5Q6ZUA9 1318 aa21.39■■□□□ 1.01
PSMD4-203ENST00000427779 CCL15-CCL14A0A0B4J2E2 113 aa21.39■■□□□ 1.01
PSMD4-203ENST00000427779 TCP10L2B9ZVM9 353 aa21.39■■□□□ 1.01
PSMD4-203ENST00000427779 WDHD1O75717 1129 aaPredicted RBP21.39■■□□□ 1.01
PSMD4-203ENST00000427779 CRKP46108 304 aa21.39■■□□□ 1.01
PSMD4-203ENST00000427779 MAP3K9P80192 1104 aa21.39■■□□□ 1.01
PSMD4-203ENST00000427779 TAF1CQ15572 869 aaPredicted RBP21.39■■□□□ 1.01
PSMD4-203ENST00000427779 CCL15Q16663 113 aa21.39■■□□□ 1.01
PSMD4-203ENST00000427779 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.39■■□□□ 1.01
PSMD4-203ENST00000427779 VPS37DQ86XT2 251 aa21.39■■□□□ 1.01
PSMD4-203ENST00000427779 SRCIN1Q9C0H9 1055 aa21.39■■□□□ 1.01
PSMD4-203ENST00000427779 SALL2Q9Y467 1007 aaPredicted RBP21.39■■□□□ 1.01
PSMD4-203ENST00000427779 VGLL4Q14135 290 aa21.38■■□□□ 1.01
PSMD4-203ENST00000427779 NBPF11Q86T75 865 aa21.38■■□□□ 1.01
PSMD4-203ENST00000427779 TBC1D22AQ8WUA7 517 aa21.38■■□□□ 1.01
PSMD4-203ENST00000427779 BRI3BPQ8WY22 251 aa21.38■■□□□ 1.01
PSMD4-203ENST00000427779 TMEM39BQ9GZU3 492 aa21.38■■□□□ 1.01
PSMD4-203ENST00000427779 MRS2Q9HD23 443 aa21.38■■□□□ 1.01
PSMD4-203ENST00000427779 HDLBPQ00341 1268 aaKnown RBP21.37■■□□□ 1.01
PSMD4-203ENST00000427779 HABP4Q5JVS0 413 aaKnown RBP21.37■■□□□ 1.01
PSMD4-203ENST00000427779 SLC4A10Q6U841 1118 aa21.37■■□□□ 1.01
PSMD4-203ENST00000427779 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.37■■□□□ 1.014e-7■□□□□ 10.1
PSMD4-203ENST00000427779 BRCA2P51587 3418 aa21.36■■□□□ 1.01
PSMD4-203ENST00000427779 FRAT2O75474 233 aaPredicted RBP21.36■■□□□ 1.01
PSMD4-203ENST00000427779 EN2P19622 333 aaPredicted RBP21.36■■□□□ 1.01
PSMD4-203ENST00000427779 SLC9C1Q4G0N8 1177 aa21.36■■□□□ 1.01
PSMD4-203ENST00000427779 CDAN1Q8IWY9 1227 aa21.36■■□□□ 1.01
PSMD4-203ENST00000427779 OTUD5Q96G74 571 aa21.36■■□□□ 1.01
PSMD4-203ENST00000427779 ZNF333Q96JL9 665 aa21.36■■□□□ 1.01
PSMD4-203ENST00000427779 PUS3Q9BZE2 481 aaKnown RBP21.36■■□□□ 1.01
PSMD4-203ENST00000427779 CAVIN4Q5BKX8 364 aa21.35■■□□□ 1.01
PSMD4-203ENST00000427779 CNKSR2Q8WXI2 1034 aa21.35■■□□□ 1.01
PSMD4-203ENST00000427779 HOOK2Q96ED9 719 aa21.35■■□□□ 1.01
PSMD4-203ENST00000427779 SUCLG2Q96I99 432 aa21.35■■□□□ 1.01
PSMD4-203ENST00000427779 TMOD2Q9NZR1 351 aa21.35■■□□□ 1.01
PSMD4-203ENST00000427779 CAP1Q01518 475 aa21.34■■□□□ 1.01
PSMD4-203ENST00000427779 FBXO33Q7Z6M2 555 aa21.34■■□□□ 1.01
PSMD4-203ENST00000427779 FAM43AQ8N2R8 423 aa21.34■■□□□ 1.01
PSMD4-203ENST00000427779 TEKT1Q969V4 418 aa21.34■■□□□ 1.01
PSMD4-203ENST00000427779 ZCCHC17Q9NP64 241 aaKnown RBP21.34■■□□□ 1.01
PSMD4-203ENST00000427779 RIPOR2Q9Y4F9 1068 aa21.34■■□□□ 1.01
PSMD4-203ENST00000427779 SPDYE5A6NIY4 337 aa21.33■■□□□ 1.01
PSMD4-203ENST00000427779 CETPP11597 493 aa21.33■■□□□ 1.01
PSMD4-203ENST00000427779 CHAF1AQ13111 956 aaPredicted RBP21.33■■□□□ 1.01
PSMD4-203ENST00000427779 KIF22Q14807 665 aa21.33■■□□□ 1.01
PSMD4-203ENST00000427779 PTCH2Q9Y6C5 1203 aa21.33■■□□□ 1.01
PSMD4-203ENST00000427779 MAST3O60307 1309 aa21.32■■□□□ 1
PSMD4-203ENST00000427779 SLC4A8Q2Y0W8 1093 aa21.32■■□□□ 1
PSMD4-203ENST00000427779 METTL24Q5JXM2 366 aa21.32■■□□□ 1
PSMD4-203ENST00000427779 ERO1BQ86YB8 467 aa21.32■■□□□ 1
PSMD4-203ENST00000427779 KAZALD1Q96I82 304 aa21.32■■□□□ 1
PSMD4-203ENST00000427779 IQSEC3Q9UPP2 1182 aaPredicted RBP21.32■■□□□ 1
PSMD4-203ENST00000427779 UTYO14607 1347 aa21.31■■□□□ 1
PSMD4-203ENST00000427779 MYH13Q9UKX3 1938 aa21.31■■□□□ 1
PSMD4-203ENST00000427779 NBPF7P0C2Y1 421 aaPredicted RBP21.31■■□□□ 1
PSMD4-203ENST00000427779 FKBP1CQ5VVH2 108 aa21.31■■□□□ 1
PSMD4-203ENST00000427779 FAM83AQ86UY5 434 aa21.31■■□□□ 1
PSMD4-203ENST00000427779 ZDHHC15Q96MV8 337 aa21.31■■□□□ 1
PSMD4-203ENST00000427779 WRNIP1Q96S55 665 aa21.31■■□□□ 1
PSMD4-203ENST00000427779 MRIQ9BWK5 157 aa21.31■■□□□ 1
PSMD4-203ENST00000427779 SPINK5Q9NQ38 1064 aaPredicted RBP21.31■■□□□ 1
PSMD4-203ENST00000427779 SNCAIPQ9Y6H5 919 aa21.31■■□□□ 1
PSMD4-203ENST00000427779 TLR2O60603 784 aa21.3■■□□□ 1
PSMD4-203ENST00000427779 PDE8BO95263 885 aa21.3■■□□□ 1
PSMD4-203ENST00000427779 GNRH1P01148 92 aa21.3■■□□□ 1
PSMD4-203ENST00000427779 SNAPC2Q13487 334 aa21.3■■□□□ 1
PSMD4-203ENST00000427779 GRIK5Q16478 980 aa21.3■■□□□ 1
PSMD4-203ENST00000427779 RABL6Q3YEC7 729 aaPredicted RBP21.3■■□□□ 1
PSMD4-203ENST00000427779 DCAF15Q66K64 600 aa21.3■■□□□ 1
PSMD4-203ENST00000427779 BICC1Q9H694 974 aaKnown RBP21.3■■□□□ 1
PSMD4-203ENST00000427779 SUGT1Q9Y2Z0 365 aa21.3■■□□□ 1
PSMD4-203ENST00000427779 RPAP1Q9BWH6 1393 aaPredicted RBP21.29■■□□□ 1
PSMD4-203ENST00000427779 CACNB3P54284 484 aa21.29■■□□□ 1
PSMD4-203ENST00000427779 PRMT2P55345 433 aa21.28■■□□□ 1
PSMD4-203ENST00000427779 LACTBP83111 547 aaPredicted RBP21.28■■□□□ 1
PSMD4-203ENST00000427779 PPIL2Q13356 520 aa21.28■■□□□ 1
PSMD4-203ENST00000427779 LRRC24Q50LG9 513 aa21.28■■□□□ 1
PSMD4-203ENST00000427779 KIF16BQ96L93 1317 aa21.28■■□□□ 1
PSMD4-203ENST00000427779 ZSWIM8A7E2V4 1837 aa21.27■■□□□ 1
PSMD4-203ENST00000427779 BTBD19C9JJ37 291 aa21.27■■□□□ 1
PSMD4-203ENST00000427779 IRF6O14896 467 aa21.27■■□□□ 1
PSMD4-203ENST00000427779 ANP32CO43423 234 aa21.27■■□□□ 1
PSMD4-203ENST00000427779 VGLL2Q8N8G2 317 aa21.27■■□□□ 1
PSMD4-203ENST00000427779 ZKSCAN4Q969J2 545 aaPredicted RBP21.27■■□□□ 1
PSMD4-203ENST00000427779 AK9Q5TCS8 1911 aa21.27■■□□□ 1
PSMD4-203ENST00000427779 IFIT1P09914 478 aaKnown RBP21.26■□□□□ 0.99
PSMD4-203ENST00000427779 BCAMP50895 628 aa21.26■□□□□ 0.99
PSMD4-203ENST00000427779 PPATQ06203 517 aa21.26■□□□□ 0.99
PSMD4-203ENST00000427779 HHIPL2Q6UWX4 724 aa21.26■□□□□ 0.99
PSMD4-203ENST00000427779 ZNF341Q9BYN7 854 aa21.26■□□□□ 0.99
PSMD4-203ENST00000427779 CEP290O15078 2479 aa21.26■□□□□ 0.99
PSMD4-203ENST00000427779 PUM3Q15397 648 aaKnown RBP21.25■□□□□ 0.99
PSMD4-203ENST00000427779 APOBEC3HQ6NTF7 200 aaKnown RBP21.25■□□□□ 0.99
PSMD4-203ENST00000427779 ANKRD44Q8N8A2 993 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms