RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 SOX10P56693 466 aa16.4■□□□□ 0.22
DEPDC7-203ENST00000427755 INHBEP58166 350 aa16.4■□□□□ 0.22
DEPDC7-203ENST00000427755 TNFAIP1Q13829 316 aa16.4■□□□□ 0.22
DEPDC7-203ENST00000427755 ALDH1L2Q3SY69 923 aa16.4■□□□□ 0.22
DEPDC7-203ENST00000427755 VPS37DQ86XT2 251 aa16.4■□□□□ 0.22
DEPDC7-203ENST00000427755 IFNL1Q8IU54 200 aa16.4■□□□□ 0.22
DEPDC7-203ENST00000427755 AKAP11Q9UKA4 1901 aa16.4■□□□□ 0.22
DEPDC7-203ENST00000427755 IGF2BP3O00425 579 aaKnown RBP eCLIP16.39■□□□□ 0.21
DEPDC7-203ENST00000427755 ALDH1A1P00352 501 aa16.39■□□□□ 0.21
DEPDC7-203ENST00000427755 IREB2P48200 963 aaKnown RBP16.39■□□□□ 0.21
DEPDC7-203ENST00000427755 BCAMP50895 628 aa16.39■□□□□ 0.21
DEPDC7-203ENST00000427755 CHAF1AQ13111 956 aaPredicted RBP16.39■□□□□ 0.21
DEPDC7-203ENST00000427755 CAVIN4Q5BKX8 364 aa16.39■□□□□ 0.21
DEPDC7-203ENST00000427755 KIF16BQ96L93 1317 aa16.39■□□□□ 0.21
DEPDC7-203ENST00000427755 FKTNO75072 461 aa16.38■□□□□ 0.21
DEPDC7-203ENST00000427755 HDLBPQ00341 1268 aaKnown RBP16.38■□□□□ 0.21
DEPDC7-203ENST00000427755 ANKRD13AQ8IZ07 590 aa16.38■□□□□ 0.21
DEPDC7-203ENST00000427755 TBC1D22AQ8WUA7 517 aa16.38■□□□□ 0.21
DEPDC7-203ENST00000427755 TMEM39BQ9GZU3 492 aa16.38■□□□□ 0.21
DEPDC7-203ENST00000427755 SMC4Q9NTJ3 1288 aa16.38■□□□□ 0.21
DEPDC7-203ENST00000427755 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.38■□□□□ 0.21
DEPDC7-203ENST00000427755 TCP10L2B9ZVM9 353 aa16.37■□□□□ 0.21
DEPDC7-203ENST00000427755 EYA2O00167 538 aa16.37■□□□□ 0.21
DEPDC7-203ENST00000427755 PUM3Q15397 648 aaKnown RBP16.37■□□□□ 0.21
DEPDC7-203ENST00000427755 MRIQ9BWK5 157 aa16.37■□□□□ 0.21
DEPDC7-203ENST00000427755 TESPA1A2RU30 521 aaPredicted RBP16.36■□□□□ 0.21
DEPDC7-203ENST00000427755 FRAT2O75474 233 aaPredicted RBP16.36■□□□□ 0.21
DEPDC7-203ENST00000427755 IFIT1P09914 478 aaKnown RBP16.36■□□□□ 0.21
DEPDC7-203ENST00000427755 FBXO46Q6PJ61 603 aaPredicted RBP16.36■□□□□ 0.21
DEPDC7-203ENST00000427755 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.36■□□□□ 0.21
DEPDC7-203ENST00000427755 ATG9AQ7Z3C6 839 aa16.36■□□□□ 0.21
DEPDC7-203ENST00000427755 ZDHHC15Q96MV8 337 aa16.36■□□□□ 0.21
DEPDC7-203ENST00000427755 PTPN18Q99952 460 aa16.36■□□□□ 0.21
DEPDC7-203ENST00000427755 APOBEC3HQ6NTF7 200 aaKnown RBP16.35■□□□□ 0.21
DEPDC7-203ENST00000427755 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.35■□□□□ 0.21
DEPDC7-203ENST00000427755 TEKT1Q969V4 418 aa16.35■□□□□ 0.21
DEPDC7-203ENST00000427755 OPTNQ96CV9 577 aa16.35■□□□□ 0.21
DEPDC7-203ENST00000427755 ELP3Q9H9T3 547 aa16.35■□□□□ 0.21
DEPDC7-203ENST00000427755 SUGT1Q9Y2Z0 365 aa16.35■□□□□ 0.21
DEPDC7-203ENST00000427755 CT47B1P0C2W7 299 aaPredicted RBP16.34■□□□□ 0.21
DEPDC7-203ENST00000427755 TNNI2P48788 182 aa16.34■□□□□ 0.21
DEPDC7-203ENST00000427755 CACNB3P54284 484 aa16.34■□□□□ 0.21
DEPDC7-203ENST00000427755 CNKSR2Q8WXI2 1034 aa16.34■□□□□ 0.21
DEPDC7-203ENST00000427755 LPIN2Q92539 896 aa16.34■□□□□ 0.21
DEPDC7-203ENST00000427755 MS4A4AQ96JQ5 239 aa16.34■□□□□ 0.21
DEPDC7-203ENST00000427755 NOB1Q9ULX3 412 aaKnown RBP16.34■□□□□ 0.21
DEPDC7-203ENST00000427755 ECM29Q5VYK3 1845 aa16.33■□□□□ 0.21
DEPDC7-203ENST00000427755 SLC5A1P13866 664 aa16.33■□□□□ 0.2
DEPDC7-203ENST00000427755 MAP3K9P80192 1104 aa16.33■□□□□ 0.2
DEPDC7-203ENST00000427755 CRHR2Q13324 411 aa16.33■□□□□ 0.2
DEPDC7-203ENST00000427755 VGLL4Q14135 290 aa16.33■□□□□ 0.2
DEPDC7-203ENST00000427755 MAST3O60307 1309 aa16.32■□□□□ 0.2
DEPDC7-203ENST00000427755 CIAO1O76071 339 aa16.32■□□□□ 0.2
DEPDC7-203ENST00000427755 UBTFL1P0CB47 393 aaPredicted RBP16.32■□□□□ 0.2
DEPDC7-203ENST00000427755 FKBP1CQ5VVH2 108 aa16.32■□□□□ 0.2
DEPDC7-203ENST00000427755 HHIPL2Q6UWX4 724 aa16.32■□□□□ 0.2
DEPDC7-203ENST00000427755 OTOP1Q7RTM1 612 aa16.32■□□□□ 0.2
DEPDC7-203ENST00000427755 ARAP2Q8WZ64 1704 aa16.32■□□□□ 0.2
DEPDC7-203ENST00000427755 FBXO3Q9UK99 471 aa16.32■□□□□ 0.2
DEPDC7-203ENST00000427755 CAP1Q01518 475 aa16.31■□□□□ 0.2
DEPDC7-203ENST00000427755 OTUD7BQ6GQQ9 843 aa16.31■□□□□ 0.2
DEPDC7-203ENST00000427755 FAM83AQ86UY5 434 aa16.31■□□□□ 0.2
DEPDC7-203ENST00000427755 BRI3BPQ8WY22 251 aa16.31■□□□□ 0.2
DEPDC7-203ENST00000427755 SIL1Q9H173 461 aa16.31■□□□□ 0.2
DEPDC7-203ENST00000427755 TRIM17Q9Y577 477 aa16.31■□□□□ 0.2
DEPDC7-203ENST00000427755 RARSP54136 660 aaKnown RBP16.3■□□□□ 0.2
DEPDC7-203ENST00000427755 WDR66Q8TBY9 1149 aa16.3■□□□□ 0.2
DEPDC7-203ENST00000427755 API5Q9BZZ5 524 aaKnown RBP16.3■□□□□ 0.2
DEPDC7-203ENST00000427755 LRRFIP2Q9Y608 721 aaKnown RBP16.3■□□□□ 0.2
DEPDC7-203ENST00000427755 SNCAIPQ9Y6H5 919 aa16.3■□□□□ 0.2
DEPDC7-203ENST00000427755 RPAP1Q9BWH6 1393 aaPredicted RBP16.29■□□□□ 0.2
DEPDC7-203ENST00000427755 SPDYE5A6NIY4 337 aa16.29■□□□□ 0.2
DEPDC7-203ENST00000427755 SLC34A2O95436 690 aa16.29■□□□□ 0.2
DEPDC7-203ENST00000427755 GTF2A2P52657 109 aa16.29■□□□□ 0.2
DEPDC7-203ENST00000427755 ATP2B3Q16720 1220 aa16.29■□□□□ 0.2
DEPDC7-203ENST00000427755 MEIS3Q99687 375 aa16.29■□□□□ 0.2
DEPDC7-203ENST00000427755 TMOD2Q9NZR1 351 aa16.29■□□□□ 0.2
DEPDC7-203ENST00000427755 CEP126Q9P2H0 1117 aa16.29■□□□□ 0.2
DEPDC7-203ENST00000427755 PA2G4Q9UQ80 394 aaKnown RBP16.29■□□□□ 0.2
DEPDC7-203ENST00000427755 CSADQ9Y600 493 aa16.29■□□□□ 0.2
DEPDC7-203ENST00000427755 LAMB1P07942 1786 aa16.28■□□□□ 0.2
DEPDC7-203ENST00000427755 CCL15-CCL14A0A0B4J2E2 113 aa16.28■□□□□ 0.2
DEPDC7-203ENST00000427755 CCER2I3L3R5 266 aa16.28■□□□□ 0.2
DEPDC7-203ENST00000427755 PRDX5P30044 214 aa16.28■□□□□ 0.2
DEPDC7-203ENST00000427755 CCL15Q16663 113 aa16.28■□□□□ 0.2
DEPDC7-203ENST00000427755 CD99L2Q8TCZ2 262 aa16.28■□□□□ 0.2
DEPDC7-203ENST00000427755 OTUD5Q96G74 571 aa16.28■□□□□ 0.2
DEPDC7-203ENST00000427755 ERO1AQ96HE7 468 aa16.28■□□□□ 0.2
DEPDC7-203ENST00000427755 WRNIP1Q96S55 665 aa16.28■□□□□ 0.2
DEPDC7-203ENST00000427755 DAGLAQ9Y4D2 1042 aa16.28■□□□□ 0.2
DEPDC7-203ENST00000427755 ZBTB22O15209 634 aa16.27■□□□□ 0.2
DEPDC7-203ENST00000427755 IL15P40933 162 aaPredicted RBP16.27■□□□□ 0.2
DEPDC7-203ENST00000427755 PHKA1P46020 1223 aa16.27■□□□□ 0.2
DEPDC7-203ENST00000427755 SP3Q02447 781 aa16.27■□□□□ 0.2
DEPDC7-203ENST00000427755 DIXDC1Q155Q3 683 aa16.27■□□□□ 0.2
DEPDC7-203ENST00000427755 FAM43AQ8N2R8 423 aa16.27■□□□□ 0.2
DEPDC7-203ENST00000427755 ZKSCAN4Q969J2 545 aaPredicted RBP16.27■□□□□ 0.2
DEPDC7-203ENST00000427755 COPRSQ9NQ92 184 aa16.27■□□□□ 0.2
DEPDC7-203ENST00000427755 OTOFQ9HC10 1997 aa16.27■□□□□ 0.19
DEPDC7-203ENST00000427755 SALL1Q9NSC2 1324 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms