RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 AIDAQ96BJ3 306 aa23.8■■□□□ 1.4
COL9A2-204ENST00000427563 TDRD3Q9H7E2 651 aaKnown RBP23.8■■□□□ 1.4
COL9A2-204ENST00000427563 ZNF70Q9UC06 446 aaPredicted RBP23.8■■□□□ 1.4
COL9A2-204ENST00000427563 CTCFP49711 727 aaPredicted RBP23.79■■□□□ 1.4
COL9A2-204ENST00000427563 NOGQ13253 232 aa23.79■■□□□ 1.4
COL9A2-204ENST00000427563 LBX1P52954 281 aa23.78■■□□□ 1.4
COL9A2-204ENST00000427563 ATP8B2P98198 1209 aa23.78■■□□□ 1.4
COL9A2-204ENST00000427563 CCDC102BQ68D86 513 aa23.78■■□□□ 1.4
COL9A2-204ENST00000427563 SSH3Q8TE77 659 aa23.78■■□□□ 1.4
COL9A2-204ENST00000427563 VEZTQ9HBM0 779 aa23.78■■□□□ 1.4
COL9A2-204ENST00000427563 A0A1B0GUL7 405 aa23.77■■□□□ 1.4
COL9A2-204ENST00000427563 ZBTB22O15209 634 aa23.77■■□□□ 1.4
COL9A2-204ENST00000427563 HDLBPQ00341 1268 aaKnown RBP23.77■■□□□ 1.4
COL9A2-204ENST00000427563 PRKG1Q13976 671 aa23.77■■□□□ 1.4
COL9A2-204ENST00000427563 CDAN1Q8IWY9 1227 aa23.77■■□□□ 1.4
COL9A2-204ENST00000427563 MYO1BO43795 1136 aa23.76■■□□□ 1.39
COL9A2-204ENST00000427563 KIF23Q02241 960 aaPredicted RBP23.76■■□□□ 1.39
COL9A2-204ENST00000427563 RASA3Q14644 834 aa23.76■■□□□ 1.39
COL9A2-204ENST00000427563 NBPF12Q5TAG4 269 aaPredicted RBP23.76■■□□□ 1.39
COL9A2-204ENST00000427563 CCDC102AQ96A19 550 aa23.76■■□□□ 1.39
COL9A2-204ENST00000427563 XAGE2Q96GT9 111 aa23.76■■□□□ 1.39
COL9A2-204ENST00000427563 PRDM10Q9NQV6 1147 aa23.76■■□□□ 1.39
COL9A2-204ENST00000427563 TSKSQ9UJT2 592 aa23.76■■□□□ 1.39
COL9A2-204ENST00000427563 SUGT1Q9Y2Z0 365 aa23.76■■□□□ 1.39
COL9A2-204ENST00000427563 PPP2R3BQ9Y5P8 575 aa23.76■■□□□ 1.39
COL9A2-204ENST00000427563 OTOFQ9HC10 1997 aa23.75■■□□□ 1.39
COL9A2-204ENST00000427563 PRDX5P30044 214 aa23.75■■□□□ 1.39
COL9A2-204ENST00000427563 APOBEC3HQ6NTF7 200 aaKnown RBP23.75■■□□□ 1.39
COL9A2-204ENST00000427563 WDR66Q8TBY9 1149 aa23.75■■□□□ 1.39
COL9A2-204ENST00000427563 ZDHHC15Q96MV8 337 aa23.75■■□□□ 1.39
COL9A2-204ENST00000427563 MRIQ9BWK5 157 aa23.75■■□□□ 1.39
COL9A2-204ENST00000427563 RASGRF1Q13972 1273 aa23.74■■□□□ 1.39
COL9A2-204ENST00000427563 LDLRAD1Q5T700 205 aa23.74■■□□□ 1.39
COL9A2-204ENST00000427563 TEKT1Q969V4 418 aa23.74■■□□□ 1.39
COL9A2-204ENST00000427563 TEPSINQ96N21 525 aa23.74■■□□□ 1.39
COL9A2-204ENST00000427563 SALL1Q9NSC2 1324 aa23.74■■□□□ 1.39
COL9A2-204ENST00000427563 NF2P35240 595 aa23.73■■□□□ 1.39
COL9A2-204ENST00000427563 CACNB3P54284 484 aa23.73■■□□□ 1.39
COL9A2-204ENST00000427563 TTLL12Q14166 644 aaPredicted RBP23.73■■□□□ 1.39
COL9A2-204ENST00000427563 RCAN3Q9UKA8 241 aa23.73■■□□□ 1.39
COL9A2-204ENST00000427563 AKAP11Q9UKA4 1901 aa23.72■■□□□ 1.39
COL9A2-204ENST00000427563 TCP10L2B9ZVM9 353 aa23.72■■□□□ 1.39
COL9A2-204ENST00000427563 SEMA3EO15041 775 aa23.72■■□□□ 1.39
COL9A2-204ENST00000427563 MAP3K11Q16584 847 aa23.72■■□□□ 1.39
COL9A2-204ENST00000427563 CEP85Q6P2H3 762 aa23.72■■□□□ 1.39
COL9A2-204ENST00000427563 CSRNP1Q96S65 589 aa23.72■■□□□ 1.39
COL9A2-204ENST00000427563 DENND2AQ9ULE3 1009 aa23.72■■□□□ 1.39
COL9A2-204ENST00000427563 ANGEL1Q9UNK9 670 aaKnown RBP23.72■■□□□ 1.39
COL9A2-204ENST00000427563 AKAP2Q9Y2D5 859 aa23.72■■□□□ 1.39
COL9A2-204ENST00000427563 MYH2Q9UKX2 1941 aa23.72■■□□□ 1.39
COL9A2-204ENST00000427563 G3BP1Q13283 466 aaKnown RBP eCLIP23.71■■□□□ 1.39
COL9A2-204ENST00000427563 DIXDC1Q155Q3 683 aa23.71■■□□□ 1.39
COL9A2-204ENST00000427563 HHIPL2Q6UWX4 724 aa23.71■■□□□ 1.39
COL9A2-204ENST00000427563 ARMC9Q7Z3E5 817 aa23.71■■□□□ 1.39
COL9A2-204ENST00000427563 GNL3LQ9NVN8 582 aaKnown RBP23.71■■□□□ 1.39
COL9A2-204ENST00000427563 LAMB1P07942 1786 aa23.7■■□□□ 1.39
COL9A2-204ENST00000427563 MAST3O60307 1309 aa23.7■■□□□ 1.38
COL9A2-204ENST00000427563 TMEM39BQ9GZU3 492 aa23.7■■□□□ 1.38
COL9A2-204ENST00000427563 NOP58Q9Y2X3 529 aaKnown RBP23.7■■□□□ 1.38
COL9A2-204ENST00000427563 DAGLAQ9Y4D2 1042 aa23.7■■□□□ 1.38
COL9A2-204ENST00000427563 CASP8AP2Q9UKL3 1982 aa23.7■■□□□ 1.38
COL9A2-204ENST00000427563 PDS5AQ29RF7 1337 aaKnown RBP23.69■■□□□ 1.38
COL9A2-204ENST00000427563 USP2O75604 605 aaPredicted RBP23.69■■□□□ 1.38
COL9A2-204ENST00000427563 PI16Q6UXB8 463 aa23.69■■□□□ 1.38
COL9A2-204ENST00000427563 TNS4Q8IZW8 715 aa23.69■■□□□ 1.38
COL9A2-204ENST00000427563 CLMNQ96JQ2 1002 aa23.69■■□□□ 1.38
COL9A2-204ENST00000427563 NEUROD6Q96NK8 337 aa23.69■■□□□ 1.38
COL9A2-204ENST00000427563 BEGAINQ9BUH8 593 aa23.69■■□□□ 1.38
COL9A2-204ENST00000427563 MVPQ14764 893 aaKnown RBP23.68■■□□□ 1.38
COL9A2-204ENST00000427563 COG6Q9Y2V7 657 aa23.68■■□□□ 1.38
COL9A2-204ENST00000427563 SURF6O75683 361 aaKnown RBP23.67■■□□□ 1.38
COL9A2-204ENST00000427563 LDHBP07195 334 aaKnown RBP23.67■■□□□ 1.38
COL9A2-204ENST00000427563 TNFAIP1Q13829 316 aa23.67■■□□□ 1.38
COL9A2-204ENST00000427563 SUPT20HL1Q3ZLR7 823 aa23.67■■□□□ 1.38
COL9A2-204ENST00000427563 C20orf194Q5TEA3 1177 aa23.67■■□□□ 1.38
COL9A2-204ENST00000427563 ZNF384Q8TF68 577 aa23.67■■□□□ 1.38
COL9A2-204ENST00000427563 HMG20BQ9P0W2 317 aa23.67■■□□□ 1.38
COL9A2-204ENST00000427563 CA12O43570 354 aa23.66■■□□□ 1.38
COL9A2-204ENST00000427563 ARID4AP29374 1257 aaPredicted RBP23.66■■□□□ 1.38
COL9A2-204ENST00000427563 MKRN3Q13064 507 aaKnown RBP23.66■■□□□ 1.38
COL9A2-204ENST00000427563 TNNI3KQ59H18 835 aa23.66■■□□□ 1.38
COL9A2-204ENST00000427563 CDC42EP5Q6NZY7 148 aa23.66■■□□□ 1.38
COL9A2-204ENST00000427563 GPR108Q9NPR9 543 aa23.66■■□□□ 1.38
COL9A2-204ENST00000427563 RNF186Q9NXI6 227 aa23.66■■□□□ 1.38
COL9A2-204ENST00000427563 FPGT-TNNI3KV9GXZ4 949 aa23.66■■□□□ 1.38
COL9A2-204ENST00000427563 MYO5AQ9Y4I1 1855 aaKnown RBP23.66■■□□□ 1.38
COL9A2-204ENST00000427563 DBNDD2Q9BQY9 259 aa23.65■■□□□ 1.38
COL9A2-204ENST00000427563 GAKO14976 1311 aa23.64■■□□□ 1.38
COL9A2-204ENST00000427563 PPP1R12BO60237 982 aaPredicted RBP23.64■■□□□ 1.37
COL9A2-204ENST00000427563 GJA5P36382 358 aa23.64■■□□□ 1.37
COL9A2-204ENST00000427563 MCAMP43121 646 aa23.64■■□□□ 1.37
COL9A2-204ENST00000427563 FKBP1CQ5VVH2 108 aa23.64■■□□□ 1.37
COL9A2-204ENST00000427563 SPRYD7Q5W111 196 aa23.64■■□□□ 1.37
COL9A2-204ENST00000427563 SIRT2Q8IXJ6 389 aa23.64■■□□□ 1.37
COL9A2-204ENST00000427563 ZBTB40Q9NUA8 1239 aa23.64■■□□□ 1.37
COL9A2-204ENST00000427563 MS4A1P11836 297 aa23.63■■□□□ 1.37
COL9A2-204ENST00000427563 NFIAQ12857 509 aa23.63■■□□□ 1.37
COL9A2-204ENST00000427563 FAM83AQ86UY5 434 aa23.63■■□□□ 1.37
COL9A2-204ENST00000427563 TLR7Q9NYK1 1049 aaKnown RBP23.63■■□□□ 1.37
COL9A2-204ENST00000427563 TRPA1O75762 1119 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms