RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 UBE3CQ15386 1083 aa21.48■■□□□ 1.03
AC055811.2-201ENST00000427497 JDP2Q8WYK2 163 aa21.48■■□□□ 1.03
AC055811.2-201ENST00000427497 U3KPZ7 1027 aaPredicted RBP21.48■■□□□ 1.03
AC055811.2-201ENST00000427497 COL1A1P02452 1464 aaPredicted RBP21.48■■□□□ 1.03
AC055811.2-201ENST00000427497 XDHP47989 1333 aa21.48■■□□□ 1.03
AC055811.2-201ENST00000427497 TSGA10IPQ3SY00 556 aa21.47■■□□□ 1.03
AC055811.2-201ENST00000427497 SLC9C2Q5TAH2 1124 aa21.47■■□□□ 1.03
AC055811.2-201ENST00000427497 TM6SF1Q9BZW5 370 aa21.47■■□□□ 1.03
AC055811.2-201ENST00000427497 TMX4Q9H1E5 349 aaPredicted RBP21.47■■□□□ 1.03
AC055811.2-201ENST00000427497 TCRBV5S4A2TA0A5A2 114 aa21.47■■□□□ 1.03
AC055811.2-201ENST00000427497 SEMA3EO15041 775 aa21.47■■□□□ 1.03
AC055811.2-201ENST00000427497 IDH1O75874 414 aaKnown RBP21.47■■□□□ 1.03
AC055811.2-201ENST00000427497 PDE6AP16499 860 aa21.47■■□□□ 1.03
AC055811.2-201ENST00000427497 ZKSCAN1P17029 563 aaPredicted RBP21.47■■□□□ 1.03
AC055811.2-201ENST00000427497 WASHC4Q2M389 1173 aa21.47■■□□□ 1.03
AC055811.2-201ENST00000427497 RNF20Q5VTR2 975 aa21.47■■□□□ 1.03
AC055811.2-201ENST00000427497 TMC4Q7Z404 712 aa21.47■■□□□ 1.03
AC055811.2-201ENST00000427497 PDS5AQ29RF7 1337 aaKnown RBP21.46■■□□□ 1.03
AC055811.2-201ENST00000427497 C15orf52Q6ZUT6 534 aaKnown RBP21.46■■□□□ 1.03
AC055811.2-201ENST00000427497 UPF3BQ9BZI7 483 aaKnown RBP21.46■■□□□ 1.03
AC055811.2-201ENST00000427497 PUS7LQ9H0K6 701 aaKnown RBP21.46■■□□□ 1.03
AC055811.2-201ENST00000427497 ANKIB1Q9P2G1 1089 aa21.46■■□□□ 1.03
AC055811.2-201ENST00000427497 DENND2AQ9ULE3 1009 aa21.46■■□□□ 1.03
AC055811.2-201ENST00000427497 MYH13Q9UKX3 1938 aa21.46■■□□□ 1.03
AC055811.2-201ENST00000427497 LTBP1Q14766 1721 aa21.45■■□□□ 1.02
AC055811.2-201ENST00000427497 POTEIP0CG38 1075 aa21.45■■□□□ 1.02
AC055811.2-201ENST00000427497 POTEJP0CG39 1038 aa21.45■■□□□ 1.02
AC055811.2-201ENST00000427497 HSPD1P10809 573 aaKnown RBP21.45■■□□□ 1.02
AC055811.2-201ENST00000427497 HIBADHP31937 336 aaKnown RBP21.45■■□□□ 1.02
AC055811.2-201ENST00000427497 MCM2P49736 904 aa21.45■■□□□ 1.02
AC055811.2-201ENST00000427497 MAP3K12Q12852 859 aa21.45■■□□□ 1.02
AC055811.2-201ENST00000427497 VPS53Q5VIR6 699 aa21.45■■□□□ 1.02
AC055811.2-201ENST00000427497 VPS37DQ86XT2 251 aa21.45■■□□□ 1.02
AC055811.2-201ENST00000427497 LARGE2Q8N3Y3 721 aa21.45■■□□□ 1.02
AC055811.2-201ENST00000427497 TAF1DQ9H5J8 278 aaPredicted RBP21.45■■□□□ 1.02
AC055811.2-201ENST00000427497 RPAP1Q9BWH6 1393 aaPredicted RBP21.45■■□□□ 1.02
AC055811.2-201ENST00000427497 ADCK5Q3MIX3 580 aa21.44■■□□□ 1.02
AC055811.2-201ENST00000427497 SP8Q8IXZ3 490 aa21.44■■□□□ 1.02
AC055811.2-201ENST00000427497 GPC2Q8N158 579 aa21.44■■□□□ 1.02
AC055811.2-201ENST00000427497 TTC14Q96N46 770 aa21.44■■□□□ 1.02
AC055811.2-201ENST00000427497 IQSEC3Q9UPP2 1182 aaPredicted RBP21.44■■□□□ 1.02
AC055811.2-201ENST00000427497 ZNF532Q9HCE3 1301 aa21.44■■□□□ 1.02
AC055811.2-201ENST00000427497 GPSM2P81274 684 aa21.44■■□□□ 1.02
AC055811.2-201ENST00000427497 CHADLQ6NUI6 762 aa21.44■■□□□ 1.02
AC055811.2-201ENST00000427497 TXNRD3Q86VQ6 643 aa21.44■■□□□ 1.02
AC055811.2-201ENST00000427497 SLKQ9H2G2 1235 aaPredicted RBP21.44■■□□□ 1.02
AC055811.2-201ENST00000427497 ZSWIM6Q9HCJ5 1215 aa21.44■■□□□ 1.02
AC055811.2-201ENST00000427497 PODXL2Q9NZ53 605 aa21.44■■□□□ 1.02
AC055811.2-201ENST00000427497 FOXP2O15409 715 aa21.43■■□□□ 1.02
AC055811.2-201ENST00000427497 GPAA1O43292 621 aa21.42■■□□□ 1.02
AC055811.2-201ENST00000427497 DDIT3P35638 169 aa21.42■■□□□ 1.02
AC055811.2-201ENST00000427497 EIF6P56537 245 aaKnown RBP21.42■■□□□ 1.02
AC055811.2-201ENST00000427497 SPRYD3Q8NCJ5 442 aa21.42■■□□□ 1.02
AC055811.2-201ENST00000427497 JAKMIP1Q96N16 626 aaKnown RBP21.42■■□□□ 1.02
AC055811.2-201ENST00000427497 RTFDC1Q9BY42 306 aaPredicted RBP21.42■■□□□ 1.02
AC055811.2-201ENST00000427497 VPS33BQ9H267 617 aa21.42■■□□□ 1.02
AC055811.2-201ENST00000427497 HACL1Q9UJ83 578 aa21.42■■□□□ 1.02
AC055811.2-201ENST00000427497 TAF6LQ9Y6J9 622 aa21.42■■□□□ 1.02
AC055811.2-201ENST00000427497 PPIP5K2O43314 1243 aa21.41■■□□□ 1.02
AC055811.2-201ENST00000427497 CASTP20810 708 aaKnown RBP21.41■■□□□ 1.02
AC055811.2-201ENST00000427497 ATP2B4P23634 1241 aa21.41■■□□□ 1.02
AC055811.2-201ENST00000427497 DPP8Q6V1X1 898 aaPredicted RBP21.41■■□□□ 1.02
AC055811.2-201ENST00000427497 SUPT20HQ8NEM7 779 aa21.41■■□□□ 1.02
AC055811.2-201ENST00000427497 KLRG1Q96E93 195 aa21.41■■□□□ 1.02
AC055811.2-201ENST00000427497 CYP21A2P08686 494 aa21.4■■□□□ 1.02
AC055811.2-201ENST00000427497 PSMA5P28066 241 aa21.4■■□□□ 1.02
AC055811.2-201ENST00000427497 AOC3Q16853 763 aa21.4■■□□□ 1.02
AC055811.2-201ENST00000427497 LDHDQ86WU2 507 aa21.4■■□□□ 1.02
AC055811.2-201ENST00000427497 NIM1KQ8IY84 436 aa21.4■■□□□ 1.02
AC055811.2-201ENST00000427497 MPNDQ8N594 471 aa21.4■■□□□ 1.02
AC055811.2-201ENST00000427497 MAGEB6Q8N7X4 407 aa21.4■■□□□ 1.02
AC055811.2-201ENST00000427497 ADAMTSL1Q8N6G6 1762 aa21.4■■□□□ 1.02
AC055811.2-201ENST00000427497 EPHX2P34913 555 aa21.4■■□□□ 1.02
AC055811.2-201ENST00000427497 KRT32Q14532 448 aa21.4■■□□□ 1.02
AC055811.2-201ENST00000427497 RUFY3Q7L099 469 aa21.4■■□□□ 1.02
AC055811.2-201ENST00000427497 LRP2BPQ9P2M1 347 aa21.4■■□□□ 1.02
AC055811.2-201ENST00000427497 GGA1Q9UJY5 639 aa21.4■■□□□ 1.02
AC055811.2-201ENST00000427497 NSFL1CQ9UNZ2 370 aaKnown RBP21.4■■□□□ 1.02
AC055811.2-201ENST00000427497 CYP46A1Q9Y6A2 500 aa21.4■■□□□ 1.02
AC055811.2-201ENST00000427497 GJA3Q9Y6H8 435 aa21.4■■□□□ 1.02
AC055811.2-201ENST00000427497 UFL1O94874 794 aa21.38■■□□□ 1.01
AC055811.2-201ENST00000427497 EAPPQ56P03 285 aaPredicted RBP21.38■■□□□ 1.01
AC055811.2-201ENST00000427497 TDRD7Q8NHU6 1098 aaKnown RBP21.38■■□□□ 1.01
AC055811.2-201ENST00000427497 TMX3Q96JJ7 454 aa21.38■■□□□ 1.01
AC055811.2-201ENST00000427497 DUOX1Q9NRD9 1551 aa21.38■■□□□ 1.01
AC055811.2-201ENST00000427497 STRBPQ96SI9 672 aaKnown RBP21.37■■□□□ 1.01
AC055811.2-201ENST00000427497 PCNTO95613 3336 aa21.37■■□□□ 1.01
AC055811.2-201ENST00000427497 FRAT2O75474 233 aaPredicted RBP21.37■■□□□ 1.01
AC055811.2-201ENST00000427497 HSP90AA1P07900 732 aaKnown RBP21.37■■□□□ 1.01
AC055811.2-201ENST00000427497 CPA1P15085 419 aa21.37■■□□□ 1.01
AC055811.2-201ENST00000427497 ZNF804AQ7Z570 1209 aa21.37■■□□□ 1.01
AC055811.2-201ENST00000427497 PNMA8AQ86V59 439 aaPredicted RBP21.37■■□□□ 1.01
AC055811.2-201ENST00000427497 TBC1D16Q8TBP0 767 aa21.37■■□□□ 1.01
AC055811.2-201ENST00000427497 ABCF2Q9UG63 623 aa21.37■■□□□ 1.01
AC055811.2-201ENST00000427497 POLLQ9UGP5 575 aa21.37■■□□□ 1.01
AC055811.2-201ENST00000427497 CTNNA3Q9UI47 895 aa21.37■■□□□ 1.01
AC055811.2-201ENST00000427497 MAST2Q6P0Q8 1798 aa21.36■■□□□ 1.01
AC055811.2-201ENST00000427497 FGAP02671 866 aa21.36■■□□□ 1.01
AC055811.2-201ENST00000427497 AK2P54819 239 aa21.36■■□□□ 1.01
AC055811.2-201ENST00000427497 KIAA2012Q0VF49 1180 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms