RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.99□□□□□ -0.49
LSG1-202ENST00000427461 TEPSINQ96N21 525 aa11.99□□□□□ -0.49
LSG1-202ENST00000427461 TIMELESSQ9UNS1 1208 aa11.99□□□□□ -0.49
LSG1-202ENST00000427461 MGAMO43451 1857 aa11.99□□□□□ -0.49
LSG1-202ENST00000427461 SPDYE5A6NIY4 337 aa11.98□□□□□ -0.49
LSG1-202ENST00000427461 IRF6O14896 467 aa11.98□□□□□ -0.49
LSG1-202ENST00000427461 NECAB2Q7Z6G3 386 aa11.98□□□□□ -0.49
LSG1-202ENST00000427461 SLAIN1Q8ND83 568 aa11.98□□□□□ -0.49
LSG1-202ENST00000427461 PLEKHF1Q96S99 279 aa11.98□□□□□ -0.49
LSG1-202ENST00000427461 ZCCHC17Q9NP64 241 aaKnown RBP11.98□□□□□ -0.49
LSG1-202ENST00000427461 CSADQ9Y600 493 aa11.98□□□□□ -0.49
LSG1-202ENST00000427461 ADGRA2Q96PE1 1338 aa11.97□□□□□ -0.49
LSG1-202ENST00000427461 ADCY3O60266 1144 aa11.97□□□□□ -0.49
LSG1-202ENST00000427461 INHAP05111 366 aa11.97□□□□□ -0.49
LSG1-202ENST00000427461 NEFMP07197 916 aa11.97□□□□□ -0.49
LSG1-202ENST00000427461 PPP2R1AP30153 589 aa11.97□□□□□ -0.49
LSG1-202ENST00000427461 RBM5P52756 815 aaKnown RBP eCLIP11.97□□□□□ -0.49
LSG1-202ENST00000427461 HELBQ8NG08 1087 aaPredicted RBP11.97□□□□□ -0.49
LSG1-202ENST00000427461 FAM122AQ96E09 287 aa11.97□□□□□ -0.49
LSG1-202ENST00000427461 CRISPLD2Q9H0B8 497 aa11.97□□□□□ -0.49
LSG1-202ENST00000427461 CD209Q9NNX6 404 aa11.97□□□□□ -0.49
LSG1-202ENST00000427461 BSDC1Q9NW68 430 aaPredicted RBP11.97□□□□□ -0.49
LSG1-202ENST00000427461 JAG2Q9Y219 1238 aa11.97□□□□□ -0.49
LSG1-202ENST00000427461 SNCAIPQ9Y6H5 919 aa11.97□□□□□ -0.49
LSG1-202ENST00000427461 FAM109BQ6ICB4 259 aaPredicted RBP11.96□□□□□ -0.49
LSG1-202ENST00000427461 MAFAQ8NHW3 353 aaPredicted RBP11.96□□□□□ -0.49
LSG1-202ENST00000427461 ZKSCAN4Q969J2 545 aaPredicted RBP11.96□□□□□ -0.49
LSG1-202ENST00000427461 CDC5LQ99459 802 aaKnown RBP11.96□□□□□ -0.49
LSG1-202ENST00000427461 MYD88Q99836 296 aa11.96□□□□□ -0.49
LSG1-202ENST00000427461 TMEM39BQ9GZU3 492 aa11.96□□□□□ -0.49
LSG1-202ENST00000427461 GREM2Q9H772 168 aa11.96□□□□□ -0.49
LSG1-202ENST00000427461 TDRD3Q9H7E2 651 aaKnown RBP11.96□□□□□ -0.49
LSG1-202ENST00000427461 PAK6Q9NQU5 681 aaPredicted RBP11.96□□□□□ -0.49
LSG1-202ENST00000427461 ZNF70Q9UC06 446 aaPredicted RBP11.96□□□□□ -0.49
LSG1-202ENST00000427461 TTC28Q96AY4 2481 aa11.96□□□□□ -0.5
LSG1-202ENST00000427461 TCP10L2B9ZVM9 353 aa11.95□□□□□ -0.5
LSG1-202ENST00000427461 SNAP23O00161 211 aa11.95□□□□□ -0.5
LSG1-202ENST00000427461 PDHXO00330 501 aa11.95□□□□□ -0.5
LSG1-202ENST00000427461 PCCAP05165 728 aaPredicted RBP11.95□□□□□ -0.5
LSG1-202ENST00000427461 SNAPC2Q13487 334 aa11.95□□□□□ -0.5
LSG1-202ENST00000427461 HDGFL1Q5TGJ6 251 aa11.95□□□□□ -0.5
LSG1-202ENST00000427461 RIC3Q7Z5B4 369 aa11.95□□□□□ -0.5
LSG1-202ENST00000427461 CDX2Q99626 313 aaPredicted RBP11.95□□□□□ -0.5
LSG1-202ENST00000427461 LEMD3Q9Y2U8 911 aa11.95□□□□□ -0.5
LSG1-202ENST00000427461 ARAP2Q8WZ64 1704 aa11.94□□□□□ -0.5
LSG1-202ENST00000427461 CDH23Q9H251 3354 aa11.94□□□□□ -0.5
LSG1-202ENST00000427461 HSP90B1P14625 803 aaKnown RBP11.94□□□□□ -0.5
LSG1-202ENST00000427461 FLT3LGP49771 235 aa11.94□□□□□ -0.5
LSG1-202ENST00000427461 FCGRTP55899 365 aa11.94□□□□□ -0.5
LSG1-202ENST00000427461 MDM2Q00987 491 aaPredicted RBP11.94□□□□□ -0.5
LSG1-202ENST00000427461 SPDYE2Q495Y8 402 aa11.94□□□□□ -0.5
LSG1-202ENST00000427461 ERO1BQ86YB8 467 aa11.94□□□□□ -0.5
LSG1-202ENST00000427461 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.94□□□□□ -0.5
LSG1-202ENST00000427461 DDX60LQ5H9U9 1706 aaKnown RBP11.94□□□□□ -0.5
LSG1-202ENST00000427461 TMEM265A0A087WTH1 108 aa11.93□□□□□ -0.5
LSG1-202ENST00000427461 TNFRSF10AO00220 468 aa11.93□□□□□ -0.5
LSG1-202ENST00000427461 CTSWP56202 376 aa11.93□□□□□ -0.5
LSG1-202ENST00000427461 TNFAIP1Q13829 316 aa11.93□□□□□ -0.5
LSG1-202ENST00000427461 ZNF697Q5TEC3 545 aa11.93□□□□□ -0.5
LSG1-202ENST00000427461 TTLL11Q8NHH1 800 aa11.93□□□□□ -0.5
LSG1-202ENST00000427461 SYMPKQ92797 1274 aaKnown RBP11.93□□□□□ -0.5
LSG1-202ENST00000427461 DBF4Q9UBU7 674 aaPredicted RBP11.93□□□□□ -0.5
LSG1-202ENST00000427461 COL2A1P02458 1487 aaPredicted RBP11.93□□□□□ -0.5
LSG1-202ENST00000427461 CYP2C8P10632 490 aa11.92□□□□□ -0.5
LSG1-202ENST00000427461 BCRP11274 1271 aa11.92□□□□□ -0.5
LSG1-202ENST00000427461 PPIL2Q13356 520 aa11.92□□□□□ -0.5
LSG1-202ENST00000427461 ANKRD23Q86SG2 305 aa11.92□□□□□ -0.5
LSG1-202ENST00000427461 CCDC191Q8NCU4 936 aa11.92□□□□□ -0.5
LSG1-202ENST00000427461 MYLIPQ8WY64 445 aa11.92□□□□□ -0.5
LSG1-202ENST00000427461 WRNIP1Q96S55 665 aa11.92□□□□□ -0.5
LSG1-202ENST00000427461 PHAXQ9H814 394 aaKnown RBP11.92□□□□□ -0.5
LSG1-202ENST00000427461 TAOK2Q9UL54 1235 aa11.92□□□□□ -0.5
LSG1-202ENST00000427461 MYH3P11055 1940 aa11.92□□□□□ -0.5
LSG1-202ENST00000427461 FAM205AQ6ZU69 1335 aa11.91□□□□□ -0.5
LSG1-202ENST00000427461 RIPK4P57078 832 aa11.91□□□□□ -0.5
LSG1-202ENST00000427461 PXYLP1Q8TE99 480 aa11.91□□□□□ -0.5
LSG1-202ENST00000427461 NBPF3Q9H094 633 aa11.91□□□□□ -0.5
LSG1-202ENST00000427461 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.91□□□□□ -0.5
LSG1-202ENST00000427461 BABAM1Q9NWV8 329 aa11.91□□□□□ -0.5
LSG1-202ENST00000427461 CWC25Q9NXE8 425 aaPredicted RBP11.91□□□□□ -0.5
LSG1-202ENST00000427461 MAPK8IP3Q9UPT6 1336 aa11.9□□□□□ -0.5
LSG1-202ENST00000427461 KCNJ4P48050 445 aa11.9□□□□□ -0.5
LSG1-202ENST00000427461 CACNB3P54284 484 aa11.9□□□□□ -0.5
LSG1-202ENST00000427461 MOGSQ13724 837 aa11.9□□□□□ -0.5
LSG1-202ENST00000427461 DOCK3Q8IZD9 2030 aa11.9□□□□□ -0.5
LSG1-202ENST00000427461 C11orf49Q9H6J7 331 aa11.9□□□□□ -0.5
LSG1-202ENST00000427461 HYPKQ9NX55 129 aa11.9□□□□□ -0.5
LSG1-202ENST00000427461 LAS1LQ9Y4W2 734 aaKnown RBP11.9□□□□□ -0.5
LSG1-202ENST00000427461 PFASO15067 1338 aa11.89□□□□□ -0.51
LSG1-202ENST00000427461 TAF5LO75529 589 aa11.89□□□□□ -0.51
LSG1-202ENST00000427461 CAPN2P17655 700 aa11.89□□□□□ -0.51
LSG1-202ENST00000427461 IGHMBP2P38935 993 aaKnown RBP11.89□□□□□ -0.51
LSG1-202ENST00000427461 GOLGA2Q08379 1002 aa11.89□□□□□ -0.51
LSG1-202ENST00000427461 MAP3K12Q12852 859 aa11.89□□□□□ -0.51
LSG1-202ENST00000427461 DZIP1LQ8IYY4 767 aaKnown RBP11.89□□□□□ -0.51
LSG1-202ENST00000427461 ANKLE1Q8NAG6 615 aa11.89□□□□□ -0.51
LSG1-202ENST00000427461 ANKRD2Q9GZV1 360 aa11.89□□□□□ -0.51
LSG1-202ENST00000427461 SEMA6BQ9H3T3 888 aa11.89□□□□□ -0.51
LSG1-202ENST00000427461 TNPO2O14787 897 aaKnown RBP11.88□□□□□ -0.51
LSG1-202ENST00000427461 IL1R1P14778 569 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms