RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 CRKP46108 304 aa19.93■□□□□ 0.78
HLA-DQB2-230ENST00000427449 ATP2B3Q16720 1220 aa19.93■□□□□ 0.78
HLA-DQB2-230ENST00000427449 DZIP1LQ8IYY4 767 aaKnown RBP19.93■□□□□ 0.78
HLA-DQB2-230ENST00000427449 CCDC102AQ96A19 550 aa19.93■□□□□ 0.78
HLA-DQB2-230ENST00000427449 ZNF70Q9UC06 446 aaPredicted RBP19.93■□□□□ 0.78
HLA-DQB2-230ENST00000427449 PPP2R3BQ9Y5P8 575 aa19.93■□□□□ 0.78
HLA-DQB2-230ENST00000427449 IFIT1P09914 478 aaKnown RBP19.92■□□□□ 0.78
HLA-DQB2-230ENST00000427449 IL15P40933 162 aaPredicted RBP19.92■□□□□ 0.78
HLA-DQB2-230ENST00000427449 HDLBPQ00341 1268 aaKnown RBP19.92■□□□□ 0.78
HLA-DQB2-230ENST00000427449 CHAF1AQ13111 956 aaPredicted RBP19.92■□□□□ 0.78
HLA-DQB2-230ENST00000427449 POLA2Q14181 598 aa19.92■□□□□ 0.78
HLA-DQB2-230ENST00000427449 ZKSCAN2Q63HK3 967 aa19.92■□□□□ 0.78
HLA-DQB2-230ENST00000427449 APOBEC3HQ6NTF7 200 aaKnown RBP19.92■□□□□ 0.78
HLA-DQB2-230ENST00000427449 FRAT1Q92837 279 aaPredicted RBP19.92■□□□□ 0.78
HLA-DQB2-230ENST00000427449 TDRD3Q9H7E2 651 aaKnown RBP19.92■□□□□ 0.78
HLA-DQB2-230ENST00000427449 PHIPQ8WWQ0 1821 aa19.92■□□□□ 0.78
HLA-DQB2-230ENST00000427449 SLC5A1P13866 664 aa19.91■□□□□ 0.78
HLA-DQB2-230ENST00000427449 CAVIN4Q5BKX8 364 aa19.91■□□□□ 0.78
HLA-DQB2-230ENST00000427449 NBPF12Q5TAG4 269 aaPredicted RBP19.91■□□□□ 0.78
HLA-DQB2-230ENST00000427449 PTPRFP10586 1907 aa19.91■□□□□ 0.78
HLA-DQB2-230ENST00000427449 SALL1Q9NSC2 1324 aa19.91■□□□□ 0.78
HLA-DQB2-230ENST00000427449 IPO8O15397 1037 aaKnown RBP19.9■□□□□ 0.78
HLA-DQB2-230ENST00000427449 SRGAP3O43295 1099 aa19.9■□□□□ 0.78
HLA-DQB2-230ENST00000427449 RASA3Q14644 834 aa19.9■□□□□ 0.78
HLA-DQB2-230ENST00000427449 TBC1D22AQ8WUA7 517 aa19.9■□□□□ 0.78
HLA-DQB2-230ENST00000427449 ZDHHC15Q96MV8 337 aa19.9■□□□□ 0.78
HLA-DQB2-230ENST00000427449 SAGE1Q9NXZ1 904 aa19.9■□□□□ 0.78
HLA-DQB2-230ENST00000427449 CA12O43570 354 aa19.89■□□□□ 0.77
HLA-DQB2-230ENST00000427449 PRDX5P30044 214 aa19.89■□□□□ 0.77
HLA-DQB2-230ENST00000427449 GJA5P36382 358 aa19.89■□□□□ 0.77
HLA-DQB2-230ENST00000427449 CLMNQ96JQ2 1002 aa19.89■□□□□ 0.77
HLA-DQB2-230ENST00000427449 RPAP1Q9BWH6 1393 aaPredicted RBP19.89■□□□□ 0.77
HLA-DQB2-230ENST00000427449 MRIQ9BWK5 157 aa19.89■□□□□ 0.77
HLA-DQB2-230ENST00000427449 RNF186Q9NXI6 227 aa19.89■□□□□ 0.77
HLA-DQB2-230ENST00000427449 SUGT1Q9Y2Z0 365 aa19.89■□□□□ 0.77
HLA-DQB2-230ENST00000427449 PDS5AQ29RF7 1337 aaKnown RBP19.88■□□□□ 0.77
HLA-DQB2-230ENST00000427449 TFCP2Q12800 502 aa19.88■□□□□ 0.77
HLA-DQB2-230ENST00000427449 RASGRF1Q13972 1273 aa19.88■□□□□ 0.77
HLA-DQB2-230ENST00000427449 ZNF384Q8TF68 577 aa19.88■□□□□ 0.77
HLA-DQB2-230ENST00000427449 CEP126Q9P2H0 1117 aa19.88■□□□□ 0.77
HLA-DQB2-230ENST00000427449 ZBTB7BO15156 539 aaPredicted RBP19.87■□□□□ 0.77
HLA-DQB2-230ENST00000427449 USP2O75604 605 aaPredicted RBP19.87■□□□□ 0.77
HLA-DQB2-230ENST00000427449 GNAI2P04899 355 aa19.87■□□□□ 0.77
HLA-DQB2-230ENST00000427449 CACNB3P54284 484 aa19.87■□□□□ 0.77
HLA-DQB2-230ENST00000427449 PRKG1Q13976 671 aa19.87■□□□□ 0.77
HLA-DQB2-230ENST00000427449 CCDC102BQ68D86 513 aa19.87■□□□□ 0.77
HLA-DQB2-230ENST00000427449 VPS37DQ86XT2 251 aa19.87■□□□□ 0.77
HLA-DQB2-230ENST00000427449 SSH3Q8TE77 659 aa19.87■□□□□ 0.77
HLA-DQB2-230ENST00000427449 TMEM39BQ9GZU3 492 aa19.87■□□□□ 0.77
HLA-DQB2-230ENST00000427449 VEZTQ9HBM0 779 aa19.87■□□□□ 0.77
HLA-DQB2-230ENST00000427449 ZSWIM8A7E2V4 1837 aa19.87■□□□□ 0.77
HLA-DQB2-230ENST00000427449 ATRNL1Q5VV63 1379 aa19.86■□□□□ 0.77
HLA-DQB2-230ENST00000427449 ATAD5Q96QE3 1844 aa19.86■□□□□ 0.77
HLA-DQB2-230ENST00000427449 A0A1B0GUL7 405 aa19.86■□□□□ 0.77
HLA-DQB2-230ENST00000427449 TIMM10P62072 90 aa19.86■□□□□ 0.77
HLA-DQB2-230ENST00000427449 HHIPL2Q6UWX4 724 aa19.86■□□□□ 0.77
HLA-DQB2-230ENST00000427449 ANGEL1Q9UNK9 670 aaKnown RBP19.86■□□□□ 0.77
HLA-DQB2-230ENST00000427449 DAGLAQ9Y4D2 1042 aa19.86■□□□□ 0.77
HLA-DQB2-230ENST00000427449 AK9Q5TCS8 1911 aa19.86■□□□□ 0.77
HLA-DQB2-230ENST00000427449 DOCK1Q14185 1865 aa19.86■□□□□ 0.77
HLA-DQB2-230ENST00000427449 TM4SF4P48230 202 aa19.85■□□□□ 0.77
HLA-DQB2-230ENST00000427449 DIXDC1Q155Q3 683 aa19.85■□□□□ 0.77
HLA-DQB2-230ENST00000427449 SPRYD7Q5W111 196 aa19.85■□□□□ 0.77
HLA-DQB2-230ENST00000427449 TEKT1Q969V4 418 aa19.85■□□□□ 0.77
HLA-DQB2-230ENST00000427449 C1orf115Q9H7X2 142 aa19.85■□□□□ 0.77
HLA-DQB2-230ENST00000427449 HDAC5Q9UQL6 1122 aa19.85■□□□□ 0.77
HLA-DQB2-230ENST00000427449 TNRC18O15417 2968 aaPredicted RBP19.85■□□□□ 0.77
HLA-DQB2-230ENST00000427449 DDX60LQ5H9U9 1706 aaKnown RBP19.85■□□□□ 0.77
HLA-DQB2-230ENST00000427449 GAKO14976 1311 aa19.84■□□□□ 0.77
HLA-DQB2-230ENST00000427449 SEMA3EO15041 775 aa19.84■□□□□ 0.77
HLA-DQB2-230ENST00000427449 MYO1BO43795 1136 aa19.84■□□□□ 0.77
HLA-DQB2-230ENST00000427449 RBM5P52756 815 aaKnown RBP eCLIP19.84■□□□□ 0.77
HLA-DQB2-230ENST00000427449 WDR66Q8TBY9 1149 aa19.84■□□□□ 0.77
HLA-DQB2-230ENST00000427449 XAGE2Q96GT9 111 aa19.84■□□□□ 0.77
HLA-DQB2-230ENST00000427449 TCP10L2B9ZVM9 353 aa19.83■□□□□ 0.77
HLA-DQB2-230ENST00000427449 NF2P35240 595 aa19.83■□□□□ 0.77
HLA-DQB2-230ENST00000427449 FKBP1CQ5VVH2 108 aa19.83■□□□□ 0.77
HLA-DQB2-230ENST00000427449 PI16Q6UXB8 463 aa19.83■□□□□ 0.77
HLA-DQB2-230ENST00000427449 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.83■□□□□ 0.77
HLA-DQB2-230ENST00000427449 CENPFP49454 3210 aa19.83■□□□□ 0.76
HLA-DQB2-230ENST00000427449 MAST3O60307 1309 aa19.82■□□□□ 0.76
HLA-DQB2-230ENST00000427449 TRPA1O75762 1119 aa19.82■□□□□ 0.76
HLA-DQB2-230ENST00000427449 ARID4AP29374 1257 aaPredicted RBP19.82■□□□□ 0.76
HLA-DQB2-230ENST00000427449 ARMC9Q7Z3E5 817 aa19.82■□□□□ 0.76
HLA-DQB2-230ENST00000427449 FAM83AQ86UY5 434 aa19.82■□□□□ 0.76
HLA-DQB2-230ENST00000427449 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.82■□□□□ 0.76
HLA-DQB2-230ENST00000427449 PANK1Q8TE04 598 aa19.82■□□□□ 0.76
HLA-DQB2-230ENST00000427449 WNK4Q96J92 1243 aa19.82■□□□□ 0.76
HLA-DQB2-230ENST00000427449 BEGAINQ9BUH8 593 aa19.82■□□□□ 0.76
HLA-DQB2-230ENST00000427449 CFHR5Q9BXR6 569 aa19.82■□□□□ 0.76
HLA-DQB2-230ENST00000427449 R3HDMLQ9H3Y0 253 aa19.82■□□□□ 0.76
HLA-DQB2-230ENST00000427449 UNCXA6NJT0 531 aa19.81■□□□□ 0.76
HLA-DQB2-230ENST00000427449 ATP8B2P98198 1209 aa19.81■□□□□ 0.76
HLA-DQB2-230ENST00000427449 NFIAQ12857 509 aa19.81■□□□□ 0.76
HLA-DQB2-230ENST00000427449 MKRN3Q13064 507 aaKnown RBP19.81■□□□□ 0.76
HLA-DQB2-230ENST00000427449 TNFAIP1Q13829 316 aa19.81■□□□□ 0.76
HLA-DQB2-230ENST00000427449 TTLL12Q14166 644 aaPredicted RBP19.81■□□□□ 0.76
HLA-DQB2-230ENST00000427449 FAM198AQ9UFP1 575 aa19.81■□□□□ 0.76
HLA-DQB2-230ENST00000427449 FRAT2O75474 233 aaPredicted RBP19.8■□□□□ 0.76
HLA-DQB2-230ENST00000427449 CDC42EP5Q6NZY7 148 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms