RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 GRIK5Q16478 980 aa12.66□□□□□ -0.38
COMMD1-202ENST00000427417 ATG9AQ7Z3C6 839 aa12.66□□□□□ -0.38
COMMD1-202ENST00000427417 SIL1Q9H173 461 aa12.66□□□□□ -0.38
COMMD1-202ENST00000427417 COPRSQ9NQ92 184 aa12.66□□□□□ -0.38
COMMD1-202ENST00000427417 RNF186Q9NXI6 227 aa12.66□□□□□ -0.38
COMMD1-202ENST00000427417 SSC5DA1L4H1 1573 aa12.65□□□□□ -0.38
COMMD1-202ENST00000427417 UNCXA6NJT0 531 aa12.65□□□□□ -0.38
COMMD1-202ENST00000427417 BCAR3O75815 825 aa12.65□□□□□ -0.38
COMMD1-202ENST00000427417 CRKP46108 304 aa12.65□□□□□ -0.38
COMMD1-202ENST00000427417 TNNI2P48788 182 aa12.65□□□□□ -0.38
COMMD1-202ENST00000427417 ATP2B3Q16720 1220 aa12.65□□□□□ -0.38
COMMD1-202ENST00000427417 ZKSCAN2Q63HK3 967 aa12.65□□□□□ -0.38
COMMD1-202ENST00000427417 DZIP1LQ8IYY4 767 aaKnown RBP12.65□□□□□ -0.38
COMMD1-202ENST00000427417 WDR66Q8TBY9 1149 aa12.65□□□□□ -0.38
COMMD1-202ENST00000427417 TEKT1Q969V4 418 aa12.65□□□□□ -0.38
COMMD1-202ENST00000427417 MRIQ9BWK5 157 aa12.65□□□□□ -0.38
COMMD1-202ENST00000427417 GNL3LQ9NVN8 582 aaKnown RBP12.65□□□□□ -0.38
COMMD1-202ENST00000427417 ANGEL1Q9UNK9 670 aaKnown RBP12.65□□□□□ -0.38
COMMD1-202ENST00000427417 ARAP2Q8WZ64 1704 aa12.65□□□□□ -0.38
COMMD1-202ENST00000427417 SRGAP3O43295 1099 aa12.64□□□□□ -0.39
COMMD1-202ENST00000427417 GNAI2P04899 355 aa12.64□□□□□ -0.39
COMMD1-202ENST00000427417 MTX1Q13505 466 aa12.64□□□□□ -0.39
COMMD1-202ENST00000427417 RASA3Q14644 834 aa12.64□□□□□ -0.39
COMMD1-202ENST00000427417 SPDYE2Q495Y8 402 aa12.64□□□□□ -0.39
COMMD1-202ENST00000427417 MCOLN1Q9GZU1 580 aa12.64□□□□□ -0.39
COMMD1-202ENST00000427417 TDRD3Q9H7E2 651 aaKnown RBP12.64□□□□□ -0.39
COMMD1-202ENST00000427417 ZNF70Q9UC06 446 aaPredicted RBP12.64□□□□□ -0.39
COMMD1-202ENST00000427417 ZBED9Q6R2W3 1325 aa12.63□□□□□ -0.39
COMMD1-202ENST00000427417 SREBF2Q12772 1141 aa12.63□□□□□ -0.39
COMMD1-202ENST00000427417 DGKZQ13574 1117 aa12.63□□□□□ -0.39
COMMD1-202ENST00000427417 MAP3K11Q16584 847 aa12.63□□□□□ -0.39
COMMD1-202ENST00000427417 LDLRAD1Q5T700 205 aa12.63□□□□□ -0.39
COMMD1-202ENST00000427417 CLUAP1Q96AJ1 413 aa12.63□□□□□ -0.39
COMMD1-202ENST00000427417 TMOD2Q9NZR1 351 aa12.63□□□□□ -0.39
COMMD1-202ENST00000427417 PA2G4Q9UQ80 394 aaKnown RBP12.63□□□□□ -0.39
COMMD1-202ENST00000427417 CCDC85CA6NKD9 419 aa12.62□□□□□ -0.39
COMMD1-202ENST00000427417 SEMA3EO15041 775 aa12.62□□□□□ -0.39
COMMD1-202ENST00000427417 IREB2P48200 963 aaKnown RBP12.62□□□□□ -0.39
COMMD1-202ENST00000427417 NBPF12Q5TAG4 269 aaPredicted RBP12.62□□□□□ -0.39
COMMD1-202ENST00000427417 CDAN1Q8IWY9 1227 aa12.62□□□□□ -0.39
COMMD1-202ENST00000427417 FTSJ3Q8IY81 847 aaKnown RBP12.62□□□□□ -0.39
COMMD1-202ENST00000427417 SLC10A4Q96EP9 437 aa12.62□□□□□ -0.39
COMMD1-202ENST00000427417 CLMNQ96JQ2 1002 aa12.62□□□□□ -0.39
COMMD1-202ENST00000427417 ZDHHC15Q96MV8 337 aa12.62□□□□□ -0.39
COMMD1-202ENST00000427417 DENND2AQ9ULE3 1009 aa12.62□□□□□ -0.39
COMMD1-202ENST00000427417 TNNQ9UQP3 1299 aa12.62□□□□□ -0.39
COMMD1-202ENST00000427417 AKAP2Q9Y2D5 859 aa12.62□□□□□ -0.39
COMMD1-202ENST00000427417 ZBTB22O15209 634 aa12.61□□□□□ -0.39
COMMD1-202ENST00000427417 TBC1D8O95759 1140 aa12.61□□□□□ -0.39
COMMD1-202ENST00000427417 HHIPL2Q6UWX4 724 aa12.61□□□□□ -0.39
COMMD1-202ENST00000427417 TCP10L2B9ZVM9 353 aa12.6□□□□□ -0.39
COMMD1-202ENST00000427417 ZBTB48P10074 688 aaPredicted RBP12.6□□□□□ -0.39
COMMD1-202ENST00000427417 TM4SF4P48230 202 aa12.6□□□□□ -0.39
COMMD1-202ENST00000427417 INHBEP58166 350 aa12.6□□□□□ -0.39
COMMD1-202ENST00000427417 FKBP1CQ5VVH2 108 aa12.6□□□□□ -0.39
COMMD1-202ENST00000427417 ANKRD13AQ8IZ07 590 aa12.6□□□□□ -0.39
COMMD1-202ENST00000427417 ZGPATQ8N5A5 531 aaKnown RBP12.6□□□□□ -0.39
COMMD1-202ENST00000427417 TMEM57Q8N5G2 664 aa12.6□□□□□ -0.39
COMMD1-202ENST00000427417 HOOK2Q96ED9 719 aa12.6□□□□□ -0.39
COMMD1-202ENST00000427417 MYH13Q9UKX3 1938 aa12.6□□□□□ -0.39
COMMD1-202ENST00000427417 SALL1Q9NSC2 1324 aa12.6□□□□□ -0.39
COMMD1-202ENST00000427417 OTOFQ9HC10 1997 aa12.6□□□□□ -0.39
COMMD1-202ENST00000427417 MANSC4A6NHS7 340 aaPredicted RBP12.59□□□□□ -0.39
COMMD1-202ENST00000427417 LDHBP07195 334 aaKnown RBP12.59□□□□□ -0.39
COMMD1-202ENST00000427417 CACNB3P54284 484 aa12.59□□□□□ -0.39
COMMD1-202ENST00000427417 G3BP1Q13283 466 aaKnown RBP eCLIP12.59□□□□□ -0.39
COMMD1-202ENST00000427417 MVPQ14764 893 aaKnown RBP12.59□□□□□ -0.39
COMMD1-202ENST00000427417 SPRYD7Q5W111 196 aa12.59□□□□□ -0.39
COMMD1-202ENST00000427417 CCDC102BQ68D86 513 aa12.59□□□□□ -0.39
COMMD1-202ENST00000427417 FAM83AQ86UY5 434 aa12.59□□□□□ -0.39
COMMD1-202ENST00000427417 A0A1B0GUL7 405 aa12.58□□□□□ -0.4
COMMD1-202ENST00000427417 USP2O75604 605 aaPredicted RBP12.58□□□□□ -0.4
COMMD1-202ENST00000427417 ALDH1A1P00352 501 aa12.58□□□□□ -0.4
COMMD1-202ENST00000427417 PHKA1P46020 1223 aa12.58□□□□□ -0.4
COMMD1-202ENST00000427417 TIMM10P62072 90 aa12.58□□□□□ -0.4
COMMD1-202ENST00000427417 TFCP2Q12800 502 aa12.58□□□□□ -0.4
COMMD1-202ENST00000427417 APOBEC3HQ6NTF7 200 aaKnown RBP12.58□□□□□ -0.4
COMMD1-202ENST00000427417 TEPSINQ96N21 525 aa12.58□□□□□ -0.4
COMMD1-202ENST00000427417 TMEM39BQ9GZU3 492 aa12.58□□□□□ -0.4
COMMD1-202ENST00000427417 R3HDMLQ9H3Y0 253 aa12.58□□□□□ -0.4
COMMD1-202ENST00000427417 PDS5AQ29RF7 1337 aaKnown RBP12.58□□□□□ -0.4
COMMD1-202ENST00000427417 PNMA6EA0A0J9YXQ4 647 aa12.57□□□□□ -0.4
COMMD1-202ENST00000427417 GJA5P36382 358 aa12.57□□□□□ -0.4
COMMD1-202ENST00000427417 ITPRIPQ8IWB1 547 aa12.57□□□□□ -0.4
COMMD1-202ENST00000427417 SLF2Q8IX21 1173 aa12.57□□□□□ -0.4
COMMD1-202ENST00000427417 XAGE2Q96GT9 111 aa12.57□□□□□ -0.4
COMMD1-202ENST00000427417 WNK4Q96J92 1243 aa12.57□□□□□ -0.4
COMMD1-202ENST00000427417 NEUROD6Q96NK8 337 aa12.57□□□□□ -0.4
COMMD1-202ENST00000427417 MS4A1P11836 297 aa12.56□□□□□ -0.4
COMMD1-202ENST00000427417 PRDX5P30044 214 aa12.56□□□□□ -0.4
COMMD1-202ENST00000427417 ADORA1P30542 326 aa12.56□□□□□ -0.4
COMMD1-202ENST00000427417 NOM1Q5C9Z4 860 aaKnown RBP12.56□□□□□ -0.4
COMMD1-202ENST00000427417 GORABQ5T7V8 394 aa12.56□□□□□ -0.4
COMMD1-202ENST00000427417 SPTY2D1Q68D10 685 aaPredicted RBP12.56□□□□□ -0.4
COMMD1-202ENST00000427417 OTUD7BQ6GQQ9 843 aa12.56□□□□□ -0.4
COMMD1-202ENST00000427417 DZIP1Q86YF9 867 aaKnown RBP12.56□□□□□ -0.4
COMMD1-202ENST00000427417 ZNF296Q8WUU4 475 aaPredicted RBP12.56□□□□□ -0.4
COMMD1-202ENST00000427417 CFHR5Q9BXR6 569 aa12.56□□□□□ -0.4
COMMD1-202ENST00000427417 DAGLAQ9Y4D2 1042 aa12.56□□□□□ -0.4
COMMD1-202ENST00000427417 CSADQ9Y600 493 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms