RNA–Protein interactions for RNA: ENST00000427408.1

SSUH2-206, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 3

Gene SSUH2, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-206ENST00000427408 WNK4Q96J92 1243 aa17.05■□□□□ 0.32
SSUH2-206ENST00000427408 TEPSINQ96N21 525 aa17.05■□□□□ 0.32
SSUH2-206ENST00000427408 LRRFIP2Q9Y608 721 aaKnown RBP17.05■□□□□ 0.32
SSUH2-206ENST00000427408 IFIT1P09914 478 aaKnown RBP17.04■□□□□ 0.32
SSUH2-206ENST00000427408 GJA5P36382 358 aa17.04■□□□□ 0.32
SSUH2-206ENST00000427408 CACNB3P54284 484 aa17.04■□□□□ 0.32
SSUH2-206ENST00000427408 CTU1Q7Z7A3 348 aaKnown RBP17.04■□□□□ 0.32
SSUH2-206ENST00000427408 TBC1D22AQ8WUA7 517 aa17.04■□□□□ 0.32
SSUH2-206ENST00000427408 MEIS3Q99687 375 aa17.04■□□□□ 0.32
SSUH2-206ENST00000427408 TMEM39BQ9GZU3 492 aa17.04■□□□□ 0.32
SSUH2-206ENST00000427408 PA2G4Q9UQ80 394 aaKnown RBP17.04■□□□□ 0.32
SSUH2-206ENST00000427408 GPR25O00155 361 aa17.03■□□□□ 0.32
SSUH2-206ENST00000427408 IREB2P48200 963 aaKnown RBP17.03■□□□□ 0.32
SSUH2-206ENST00000427408 RGS19P49795 217 aa17.03■□□□□ 0.32
SSUH2-206ENST00000427408 SREBF2Q12772 1141 aa17.03■□□□□ 0.32
SSUH2-206ENST00000427408 LPIN2Q92539 896 aa17.03■□□□□ 0.32
SSUH2-206ENST00000427408 KIF16BQ96L93 1317 aa17.02■□□□□ 0.32
SSUH2-206ENST00000427408 AKAP11Q9UKA4 1901 aa17.02■□□□□ 0.32
SSUH2-206ENST00000427408 SLC5A1P13866 664 aa17.02■□□□□ 0.32
SSUH2-206ENST00000427408 HDLBPQ00341 1268 aaKnown RBP17.02■□□□□ 0.32
SSUH2-206ENST00000427408 TNFAIP1Q13829 316 aa17.02■□□□□ 0.32
SSUH2-206ENST00000427408 APOBEC3HQ6NTF7 200 aaKnown RBP17.02■□□□□ 0.32
SSUH2-206ENST00000427408 TEKT1Q969V4 418 aa17.02■□□□□ 0.32
SSUH2-206ENST00000427408 TNNQ9UQP3 1299 aa17.02■□□□□ 0.32
SSUH2-206ENST00000427408 IGF2BP3O00425 579 aaKnown RBP eCLIP17.01■□□□□ 0.31
SSUH2-206ENST00000427408 IFNL1Q8IU54 200 aa17.01■□□□□ 0.31
SSUH2-206ENST00000427408 CEP126Q9P2H0 1117 aa17.01■□□□□ 0.31
SSUH2-206ENST00000427408 MANSC4A6NHS7 340 aaPredicted RBP17■□□□□ 0.31
SSUH2-206ENST00000427408 UNCXA6NJT0 531 aa17■□□□□ 0.31
SSUH2-206ENST00000427408 CIAO1O76071 339 aa17■□□□□ 0.31
SSUH2-206ENST00000427408 ZBTB48P10074 688 aaPredicted RBP17■□□□□ 0.31
SSUH2-206ENST00000427408 ATP2B3Q16720 1220 aa17■□□□□ 0.31
SSUH2-206ENST00000427408 INTS3Q68E01 1043 aaKnown RBP17■□□□□ 0.31
SSUH2-206ENST00000427408 PPP1R3FQ6ZSY5 799 aaPredicted RBP17■□□□□ 0.31
SSUH2-206ENST00000427408 CNKSR2Q8WXI2 1034 aa17■□□□□ 0.31
SSUH2-206ENST00000427408 ZDHHC15Q96MV8 337 aa17■□□□□ 0.31
SSUH2-206ENST00000427408 MRIQ9BWK5 157 aa17■□□□□ 0.31
SSUH2-206ENST00000427408 ELP3Q9H9T3 547 aa17■□□□□ 0.31
SSUH2-206ENST00000427408 BCAR3O75815 825 aa16.99■□□□□ 0.31
SSUH2-206ENST00000427408 ADORA1P30542 326 aa16.99■□□□□ 0.31
SSUH2-206ENST00000427408 NOM1Q5C9Z4 860 aaKnown RBP16.99■□□□□ 0.31
SSUH2-206ENST00000427408 ANKRD13AQ8IZ07 590 aa16.99■□□□□ 0.31
SSUH2-206ENST00000427408 ARHGAP45Q92619 1136 aa16.99■□□□□ 0.31
SSUH2-206ENST00000427408 CFHR5Q9BXR6 569 aa16.99■□□□□ 0.31
SSUH2-206ENST00000427408 FBXO3Q9UK99 471 aa16.99■□□□□ 0.31
SSUH2-206ENST00000427408 SUGT1Q9Y2Z0 365 aa16.99■□□□□ 0.31
SSUH2-206ENST00000427408 FKTNO75072 461 aa16.98■□□□□ 0.31
SSUH2-206ENST00000427408 IL15P40933 162 aaPredicted RBP16.98■□□□□ 0.31
SSUH2-206ENST00000427408 PHKA1P46020 1223 aa16.98■□□□□ 0.31
SSUH2-206ENST00000427408 TNNI2P48788 182 aa16.98■□□□□ 0.31
SSUH2-206ENST00000427408 SOX10P56693 466 aa16.98■□□□□ 0.31
SSUH2-206ENST00000427408 INHBEP58166 350 aa16.98■□□□□ 0.31
SSUH2-206ENST00000427408 MAP3K9P80192 1104 aa16.98■□□□□ 0.31
SSUH2-206ENST00000427408 MLLT1Q03111 559 aaPredicted RBP16.98■□□□□ 0.31
SSUH2-206ENST00000427408 HHIPL2Q6UWX4 724 aa16.98■□□□□ 0.31
SSUH2-206ENST00000427408 WDR66Q8TBY9 1149 aa16.98■□□□□ 0.31
SSUH2-206ENST00000427408 PTPN18Q99952 460 aa16.98■□□□□ 0.31
SSUH2-206ENST00000427408 COPRSQ9NQ92 184 aa16.98■□□□□ 0.31
SSUH2-206ENST00000427408 HPS5Q9UPZ3 1129 aa16.98■□□□□ 0.31
SSUH2-206ENST00000427408 ALDH1A1P00352 501 aa16.97■□□□□ 0.31
SSUH2-206ENST00000427408 DIXDC1Q155Q3 683 aa16.97■□□□□ 0.31
SSUH2-206ENST00000427408 OPTNQ96CV9 577 aa16.97■□□□□ 0.31
SSUH2-206ENST00000427408 HDAC5Q9UQL6 1122 aa16.97■□□□□ 0.31
SSUH2-206ENST00000427408 TRIM27P14373 513 aa16.96■□□□□ 0.31
SSUH2-206ENST00000427408 PRDX5P30044 214 aa16.96■□□□□ 0.31
SSUH2-206ENST00000427408 VGLL4Q14135 290 aa16.96■□□□□ 0.31
SSUH2-206ENST00000427408 MIER1Q8N108 512 aa16.96■□□□□ 0.31
SSUH2-206ENST00000427408 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.96■□□□□ 0.31
SSUH2-206ENST00000427408 DAGLAQ9Y4D2 1042 aa16.96■□□□□ 0.31
SSUH2-206ENST00000427408 MAST3O60307 1309 aa16.96■□□□□ 0.3
SSUH2-206ENST00000427408 TESPA1A2RU30 521 aaPredicted RBP16.95■□□□□ 0.3
SSUH2-206ENST00000427408 SRGAP3O43295 1099 aa16.95■□□□□ 0.3
SSUH2-206ENST00000427408 GNAI3P08754 354 aa16.95■□□□□ 0.3
SSUH2-206ENST00000427408 TIMM10P62072 90 aa16.95■□□□□ 0.3
SSUH2-206ENST00000427408 FKBP1CQ5VVH2 108 aa16.95■□□□□ 0.3
SSUH2-206ENST00000427408 CDC42EP5Q6NZY7 148 aa16.95■□□□□ 0.3
SSUH2-206ENST00000427408 FRAT1Q92837 279 aaPredicted RBP16.95■□□□□ 0.3
SSUH2-206ENST00000427408 CLUAP1Q96AJ1 413 aa16.95■□□□□ 0.3
SSUH2-206ENST00000427408 MS4A4AQ96JQ5 239 aa16.95■□□□□ 0.3
SSUH2-206ENST00000427408 GNL3LQ9NVN8 582 aaKnown RBP16.95■□□□□ 0.3
SSUH2-206ENST00000427408 TMOD2Q9NZR1 351 aa16.95■□□□□ 0.3
SSUH2-206ENST00000427408 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.95■□□□□ 0.3
SSUH2-206ENST00000427408 ECM29Q5VYK3 1845 aa16.95■□□□□ 0.3
SSUH2-206ENST00000427408 TFCP2Q12800 502 aa16.94■□□□□ 0.3
SSUH2-206ENST00000427408 CRHR2Q13324 411 aa16.94■□□□□ 0.3
SSUH2-206ENST00000427408 PKN2Q16513 984 aaKnown RBP16.94■□□□□ 0.3
SSUH2-206ENST00000427408 CCDC102BQ68D86 513 aa16.94■□□□□ 0.3
SSUH2-206ENST00000427408 ATF7IPQ6VMQ6 1270 aa16.94■□□□□ 0.3
SSUH2-206ENST00000427408 FAM83AQ86UY5 434 aa16.94■□□□□ 0.3
SSUH2-206ENST00000427408 BRI3BPQ8WY22 251 aa16.94■□□□□ 0.3
SSUH2-206ENST00000427408 IPO8O15397 1037 aaKnown RBP16.93■□□□□ 0.3
SSUH2-206ENST00000427408 LDHBP07195 334 aaKnown RBP16.93■□□□□ 0.3
SSUH2-206ENST00000427408 NFIAQ12857 509 aa16.93■□□□□ 0.3
SSUH2-206ENST00000427408 MTX1Q13505 466 aa16.93■□□□□ 0.3
SSUH2-206ENST00000427408 MIGA2Q7L4E1 593 aa16.93■□□□□ 0.3
SSUH2-206ENST00000427408 ZKSCAN4Q969J2 545 aaPredicted RBP16.93■□□□□ 0.3
SSUH2-206ENST00000427408 DENND2AQ9ULE3 1009 aa16.93■□□□□ 0.3
SSUH2-206ENST00000427408 CSADQ9Y600 493 aa16.93■□□□□ 0.3
SSUH2-206ENST00000427408 PDE4DIPQ5VU43 2346 aa16.92■□□□□ 0.3
SSUH2-206ENST00000427408 CAP1Q01518 475 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms