RNA–Protein interactions for RNA: ENST00000427259.1

LINC00476-203, long intergenic non-protein coding RNA 476, humanhuman

TSL 2

Gene LINC00476, Length 893 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-203ENST00000427259 TDRD3Q9H7E2 651 aaKnown RBP16.48■□□□□ 0.23
LINC00476-203ENST00000427259 TRIM27P14373 513 aa16.47■□□□□ 0.23
LINC00476-203ENST00000427259 SPDYE2Q495Y8 402 aa16.47■□□□□ 0.23
LINC00476-203ENST00000427259 LDLRAD1Q5T700 205 aa16.47■□□□□ 0.23
LINC00476-203ENST00000427259 INTS3Q68E01 1043 aaKnown RBP16.47■□□□□ 0.23
LINC00476-203ENST00000427259 CLMNQ96JQ2 1002 aa16.47■□□□□ 0.23
LINC00476-203ENST00000427259 ZNF70Q9UC06 446 aaPredicted RBP16.47■□□□□ 0.23
LINC00476-203ENST00000427259 ANGEL1Q9UNK9 670 aaKnown RBP16.47■□□□□ 0.23
LINC00476-203ENST00000427259 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.47■□□□□ 0.23
LINC00476-203ENST00000427259 CRKP46108 304 aa16.46■□□□□ 0.23
LINC00476-203ENST00000427259 RASA3Q14644 834 aa16.46■□□□□ 0.23
LINC00476-203ENST00000427259 VPS37DQ86XT2 251 aa16.46■□□□□ 0.23
LINC00476-203ENST00000427259 DZIP1LQ8IYY4 767 aaKnown RBP16.46■□□□□ 0.23
LINC00476-203ENST00000427259 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.46■□□□□ 0.23
LINC00476-203ENST00000427259 SERPINA10Q9UK55 444 aa16.46■□□□□ 0.23
LINC00476-203ENST00000427259 ZBED9Q6R2W3 1325 aa16.45■□□□□ 0.22
LINC00476-203ENST00000427259 KIF16BQ96L93 1317 aa16.45■□□□□ 0.22
LINC00476-203ENST00000427259 NF2P35240 595 aa16.45■□□□□ 0.22
LINC00476-203ENST00000427259 CACNB3P54284 484 aa16.45■□□□□ 0.22
LINC00476-203ENST00000427259 CAVIN4Q5BKX8 364 aa16.45■□□□□ 0.22
LINC00476-203ENST00000427259 ARHGAP45Q92619 1136 aa16.45■□□□□ 0.22
LINC00476-203ENST00000427259 CLUAP1Q96AJ1 413 aa16.45■□□□□ 0.22
LINC00476-203ENST00000427259 TEPSINQ96N21 525 aa16.45■□□□□ 0.22
LINC00476-203ENST00000427259 MCOLN1Q9GZU1 580 aa16.45■□□□□ 0.22
LINC00476-203ENST00000427259 SAGE1Q9NXZ1 904 aa16.45■□□□□ 0.22
LINC00476-203ENST00000427259 MYO1BO43795 1136 aa16.44■□□□□ 0.22
LINC00476-203ENST00000427259 IFIT1P09914 478 aaKnown RBP16.44■□□□□ 0.22
LINC00476-203ENST00000427259 ADORA1P30542 326 aa16.44■□□□□ 0.22
LINC00476-203ENST00000427259 FRAT1Q92837 279 aaPredicted RBP16.44■□□□□ 0.22
LINC00476-203ENST00000427259 TCP10L2B9ZVM9 353 aa16.43■□□□□ 0.22
LINC00476-203ENST00000427259 FRAT2O75474 233 aaPredicted RBP16.43■□□□□ 0.22
LINC00476-203ENST00000427259 CIAO1O76071 339 aa16.43■□□□□ 0.22
LINC00476-203ENST00000427259 SLC5A1P13866 664 aa16.43■□□□□ 0.22
LINC00476-203ENST00000427259 MAP3K11Q16584 847 aa16.43■□□□□ 0.22
LINC00476-203ENST00000427259 ARMC9Q7Z3E5 817 aa16.43■□□□□ 0.22
LINC00476-203ENST00000427259 LPIN2Q92539 896 aa16.43■□□□□ 0.22
LINC00476-203ENST00000427259 TMEM39BQ9GZU3 492 aa16.43■□□□□ 0.22
LINC00476-203ENST00000427259 R3HDMLQ9H3Y0 253 aa16.43■□□□□ 0.22
LINC00476-203ENST00000427259 PPP2R3BQ9Y5P8 575 aa16.43■□□□□ 0.22
LINC00476-203ENST00000427259 USP2O75604 605 aaPredicted RBP16.42■□□□□ 0.22
LINC00476-203ENST00000427259 TBC1D8O95759 1140 aa16.42■□□□□ 0.22
LINC00476-203ENST00000427259 GJA5P36382 358 aa16.42■□□□□ 0.22
LINC00476-203ENST00000427259 PHKA1P46020 1223 aa16.42■□□□□ 0.22
LINC00476-203ENST00000427259 DGKZQ13574 1117 aa16.42■□□□□ 0.22
LINC00476-203ENST00000427259 ATP2B3Q16720 1220 aa16.42■□□□□ 0.22
LINC00476-203ENST00000427259 SPRYD7Q5W111 196 aa16.42■□□□□ 0.22
LINC00476-203ENST00000427259 ATF7IPQ6VMQ6 1270 aa16.42■□□□□ 0.22
LINC00476-203ENST00000427259 COPRSQ9NQ92 184 aa16.42■□□□□ 0.22
LINC00476-203ENST00000427259 MYH2Q9UKX2 1941 aa16.41■□□□□ 0.22
LINC00476-203ENST00000427259 APOBEC3HQ6NTF7 200 aaKnown RBP16.41■□□□□ 0.22
LINC00476-203ENST00000427259 TMEM57Q8N5G2 664 aa16.41■□□□□ 0.22
LINC00476-203ENST00000427259 TBC1D22AQ8WUA7 517 aa16.41■□□□□ 0.22
LINC00476-203ENST00000427259 PNMA6EA0A0J9YXQ4 647 aa16.4■□□□□ 0.22
LINC00476-203ENST00000427259 IPO8O15397 1037 aaKnown RBP16.4■□□□□ 0.22
LINC00476-203ENST00000427259 SRGAP3O43295 1099 aa16.4■□□□□ 0.22
LINC00476-203ENST00000427259 PRDX5P30044 214 aa16.4■□□□□ 0.22
LINC00476-203ENST00000427259 TM4SF4P48230 202 aa16.4■□□□□ 0.22
LINC00476-203ENST00000427259 MTX1Q13505 466 aa16.4■□□□□ 0.22
LINC00476-203ENST00000427259 DIXDC1Q155Q3 683 aa16.4■□□□□ 0.22
LINC00476-203ENST00000427259 WNK4Q96J92 1243 aa16.4■□□□□ 0.22
LINC00476-203ENST00000427259 CEP126Q9P2H0 1117 aa16.4■□□□□ 0.22
LINC00476-203ENST00000427259 FBXO3Q9UK99 471 aa16.4■□□□□ 0.22
LINC00476-203ENST00000427259 IL15P40933 162 aaPredicted RBP16.39■□□□□ 0.21
LINC00476-203ENST00000427259 TIMM10P62072 90 aa16.39■□□□□ 0.21
LINC00476-203ENST00000427259 HDLBPQ00341 1268 aaKnown RBP16.39■□□□□ 0.21
LINC00476-203ENST00000427259 TEKT1Q969V4 418 aa16.39■□□□□ 0.21
LINC00476-203ENST00000427259 ZDHHC15Q96MV8 337 aa16.39■□□□□ 0.21
LINC00476-203ENST00000427259 CCDC85CA6NKD9 419 aa16.38■□□□□ 0.21
LINC00476-203ENST00000427259 PPP1R12BO60237 982 aaPredicted RBP16.38■□□□□ 0.21
LINC00476-203ENST00000427259 RLBP1P12271 317 aa16.38■□□□□ 0.21
LINC00476-203ENST00000427259 TFCP2Q12800 502 aa16.38■□□□□ 0.21
LINC00476-203ENST00000427259 SUPT20HL1Q3ZLR7 823 aa16.38■□□□□ 0.21
LINC00476-203ENST00000427259 SLC10A4Q96EP9 437 aa16.38■□□□□ 0.21
LINC00476-203ENST00000427259 DAGLAQ9Y4D2 1042 aa16.38■□□□□ 0.21
LINC00476-203ENST00000427259 IGF2BP3O00425 579 aaKnown RBP eCLIP16.37■□□□□ 0.21
LINC00476-203ENST00000427259 GNAI3P08754 354 aa16.37■□□□□ 0.21
LINC00476-203ENST00000427259 TNFAIP1Q13829 316 aa16.37■□□□□ 0.21
LINC00476-203ENST00000427259 CCDC102BQ68D86 513 aa16.37■□□□□ 0.21
LINC00476-203ENST00000427259 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.37■□□□□ 0.21
LINC00476-203ENST00000427259 REM2Q8IYK8 340 aaPredicted RBP16.37■□□□□ 0.21
LINC00476-203ENST00000427259 ZNF296Q8WUU4 475 aaPredicted RBP16.37■□□□□ 0.21
LINC00476-203ENST00000427259 ELP3Q9H9T3 547 aa16.37■□□□□ 0.21
LINC00476-203ENST00000427259 MYO5AQ9Y4I1 1855 aaKnown RBP16.37■□□□□ 0.21
LINC00476-203ENST00000427259 AK9Q5TCS8 1911 aa16.37■□□□□ 0.21
LINC00476-203ENST00000427259 A0A1B0GUL7 405 aa16.36■□□□□ 0.21
LINC00476-203ENST00000427259 RASGRF1Q13972 1273 aa16.36■□□□□ 0.21
LINC00476-203ENST00000427259 ZKSCAN2Q63HK3 967 aa16.36■□□□□ 0.21
LINC00476-203ENST00000427259 HHIPL2Q6UWX4 724 aa16.36■□□□□ 0.21
LINC00476-203ENST00000427259 WDR66Q8TBY9 1149 aa16.36■□□□□ 0.21
LINC00476-203ENST00000427259 C1orf115Q9H7X2 142 aa16.36■□□□□ 0.21
LINC00476-203ENST00000427259 DOCK2Q92608 1830 aa16.35■□□□□ 0.21
LINC00476-203ENST00000427259 IREB2P48200 963 aaKnown RBP16.35■□□□□ 0.21
LINC00476-203ENST00000427259 NFIAQ12857 509 aa16.35■□□□□ 0.21
LINC00476-203ENST00000427259 VGLL4Q14135 290 aa16.35■□□□□ 0.21
LINC00476-203ENST00000427259 ANKRD13AQ8IZ07 590 aa16.35■□□□□ 0.21
LINC00476-203ENST00000427259 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.35■□□□□ 0.21
LINC00476-203ENST00000427259 PTPN18Q99952 460 aa16.35■□□□□ 0.21
LINC00476-203ENST00000427259 MRIQ9BWK5 157 aa16.35■□□□□ 0.21
LINC00476-203ENST00000427259 SUGT1Q9Y2Z0 365 aa16.35■□□□□ 0.21
LINC00476-203ENST00000427259 ZSWIM8A7E2V4 1837 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms