RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 ALG1Q9BT22 464 aa8.72□□□□□ -1.01
SMARCC1-202ENST00000425518 POLR3EQ9NVU0 708 aa8.72□□□□□ -1.01
SMARCC1-202ENST00000425518 IMPACTQ9P2X3 320 aa8.72□□□□□ -1.01
SMARCC1-202ENST00000425518 GPAA1O43292 621 aa8.71□□□□□ -1.01
SMARCC1-202ENST00000425518 KIF20AO95235 890 aa8.71□□□□□ -1.01
SMARCC1-202ENST00000425518 ANTXR2P58335 489 aa8.71□□□□□ -1.01
SMARCC1-202ENST00000425518 KIF23Q02241 960 aaPredicted RBP8.71□□□□□ -1.01
SMARCC1-202ENST00000425518 CFAP100Q494V2 611 aa8.71□□□□□ -1.01
SMARCC1-202ENST00000425518 BRAPQ7Z569 592 aa8.71□□□□□ -1.01
SMARCC1-202ENST00000425518 CCDC191Q8NCU4 936 aa8.71□□□□□ -1.01
SMARCC1-202ENST00000425518 KIF2AO00139 706 aaPredicted RBP8.71□□□□□ -1.02
SMARCC1-202ENST00000425518 UBASH3AP57075 661 aa8.71□□□□□ -1.02
SMARCC1-202ENST00000425518 MICU3Q86XE3 530 aa8.71□□□□□ -1.02
SMARCC1-202ENST00000425518 MB21D2Q8IYB1 491 aaPredicted RBP8.71□□□□□ -1.02
SMARCC1-202ENST00000425518 KRT222Q8N1A0 295 aa8.71□□□□□ -1.02
SMARCC1-202ENST00000425518 LRRN4CLQ8ND94 238 aa8.71□□□□□ -1.02
SMARCC1-202ENST00000425518 CLIC6Q96NY7 704 aa8.71□□□□□ -1.02
SMARCC1-202ENST00000425518 DNAI1Q9UI46 699 aa8.71□□□□□ -1.02
SMARCC1-202ENST00000425518 MORC2Q9Y6X9 1032 aaPredicted RBP8.71□□□□□ -1.02
SMARCC1-202ENST00000425518 MEGF6O75095 1541 aa8.71□□□□□ -1.02
SMARCC1-202ENST00000425518 MRC1P22897 1456 aa8.71□□□□□ -1.02
SMARCC1-202ENST00000425518 FOXP2O15409 715 aa8.71□□□□□ -1.02
SMARCC1-202ENST00000425518 CMA1P23946 247 aa8.71□□□□□ -1.02
SMARCC1-202ENST00000425518 PNOCQ13519 176 aa8.71□□□□□ -1.02
SMARCC1-202ENST00000425518 AXDND1Q5T1B0 1012 aaPredicted RBP8.71□□□□□ -1.02
SMARCC1-202ENST00000425518 NFXL1Q6ZNB6 911 aa8.71□□□□□ -1.02
SMARCC1-202ENST00000425518 APPBP2Q92624 585 aa8.71□□□□□ -1.02
SMARCC1-202ENST00000425518 IDH1O75874 414 aaKnown RBP8.7□□□□□ -1.02
SMARCC1-202ENST00000425518 ATF3P18847 181 aa8.7□□□□□ -1.02
SMARCC1-202ENST00000425518 NCAPHQ15003 741 aa8.7□□□□□ -1.02
SMARCC1-202ENST00000425518 SPECC1Q5M775 1068 aa8.7□□□□□ -1.02
SMARCC1-202ENST00000425518 DPF2Q92785 391 aa8.7□□□□□ -1.02
SMARCC1-202ENST00000425518 AKAP2Q9Y2D5 859 aa8.7□□□□□ -1.02
SMARCC1-202ENST00000425518 CHD2O14647 1828 aaKnown RBP8.7□□□□□ -1.02
SMARCC1-202ENST00000425518 ZFYP08048 801 aaPredicted RBP8.7□□□□□ -1.02
SMARCC1-202ENST00000425518 METAP2P50579 478 aaKnown RBP eCLIP8.7□□□□□ -1.02
SMARCC1-202ENST00000425518 SLC39A14Q15043 492 aa8.7□□□□□ -1.02
SMARCC1-202ENST00000425518 SYNE4Q8N205 404 aa8.7□□□□□ -1.02
SMARCC1-202ENST00000425518 MYL10Q9BUA6 226 aa8.7□□□□□ -1.02
SMARCC1-202ENST00000425518 TMX1Q9H3N1 280 aa8.7□□□□□ -1.02
SMARCC1-202ENST00000425518 EVCP57679 992 aa8.7□□□□□ -1.02
SMARCC1-202ENST00000425518 METTL24Q5JXM2 366 aa8.7□□□□□ -1.02
SMARCC1-202ENST00000425518 SLC9C2Q5TAH2 1124 aa8.7□□□□□ -1.02
SMARCC1-202ENST00000425518 KRT40Q6A162 431 aa8.7□□□□□ -1.02
SMARCC1-202ENST00000425518 VPS37DQ86XT2 251 aa8.7□□□□□ -1.02
SMARCC1-202ENST00000425518 PDILTQ8N807 584 aa8.7□□□□□ -1.02
SMARCC1-202ENST00000425518 NKX2-3Q8TAU0 364 aa8.7□□□□□ -1.02
SMARCC1-202ENST00000425518 UTP14AQ9BVJ6 771 aaKnown RBP8.7□□□□□ -1.02
SMARCC1-202ENST00000425518 C19orf44Q9H6X5 657 aa8.7□□□□□ -1.02
SMARCC1-202ENST00000425518 INCENPQ9NQS7 918 aa8.7□□□□□ -1.02
SMARCC1-202ENST00000425518 ST7Q9NRC1 585 aa8.7□□□□□ -1.02
SMARCC1-202ENST00000425518 CIAO1O76071 339 aa8.69□□□□□ -1.02
SMARCC1-202ENST00000425518 URI1O94763 535 aaPredicted RBP8.69□□□□□ -1.02
SMARCC1-202ENST00000425518 ATP2B1P20020 1258 aa8.69□□□□□ -1.02
SMARCC1-202ENST00000425518 IFIT5Q13325 482 aaKnown RBP8.69□□□□□ -1.02
SMARCC1-202ENST00000425518 CPLX2Q6PUV4 134 aaKnown RBP8.69□□□□□ -1.02
SMARCC1-202ENST00000425518 OLFM4Q6UX06 510 aa8.69□□□□□ -1.02
SMARCC1-202ENST00000425518 TOM1L2Q6ZVM7 507 aa8.69□□□□□ -1.02
SMARCC1-202ENST00000425518 CCDC82Q8N4S0 544 aa8.69□□□□□ -1.02
SMARCC1-202ENST00000425518 SENP2Q9HC62 589 aa8.69□□□□□ -1.02
SMARCC1-202ENST00000425518 MROH7-TTC4A0A0A0MT08 1334 aa8.69□□□□□ -1.02
SMARCC1-202ENST00000425518 B4E1Z4 1266 aa8.69□□□□□ -1.02
SMARCC1-202ENST00000425518 GPTP24298 496 aa8.69□□□□□ -1.02
SMARCC1-202ENST00000425518 TRIM29Q14134 588 aa8.69□□□□□ -1.02
SMARCC1-202ENST00000425518 ARHGAP29Q52LW3 1261 aa8.69□□□□□ -1.02
SMARCC1-202ENST00000425518 UBE2Q2LH0YL09 131 aa8.69□□□□□ -1.02
SMARCC1-202ENST00000425518 SHC4Q6S5L8 630 aa8.69□□□□□ -1.02
SMARCC1-202ENST00000425518 LDHAL6AQ6ZMR3 332 aa8.69□□□□□ -1.02
SMARCC1-202ENST00000425518 CYB5R4Q7L1T6 521 aa8.69□□□□□ -1.02
SMARCC1-202ENST00000425518 JMYQ8N9B5 988 aa8.69□□□□□ -1.02
SMARCC1-202ENST00000425518 CNNM3Q8NE01 707 aa8.69□□□□□ -1.02
SMARCC1-202ENST00000425518 ZCRB1Q8TBF4 217 aaKnown RBP8.69□□□□□ -1.02
SMARCC1-202ENST00000425518 BPIFA3Q9BQP9 254 aa8.69□□□□□ -1.02
SMARCC1-202ENST00000425518 FANCLQ9NW38 375 aa8.69□□□□□ -1.02
SMARCC1-202ENST00000425518 ANGEL1Q9UNK9 670 aaKnown RBP8.69□□□□□ -1.02
SMARCC1-202ENST00000425518 PSDA5PKW4 1024 aaPredicted RBP8.68□□□□□ -1.02
SMARCC1-202ENST00000425518 TMEM232C9JQI7 657 aa8.68□□□□□ -1.02
SMARCC1-202ENST00000425518 SLFN14P0C7P3 912 aa8.68□□□□□ -1.02
SMARCC1-202ENST00000425518 TOP1P11387 765 aaKnown RBP8.68□□□□□ -1.02
SMARCC1-202ENST00000425518 GABPB1Q06547 395 aaPredicted RBP8.68□□□□□ -1.02
SMARCC1-202ENST00000425518 UBXN4Q92575 508 aa8.68□□□□□ -1.02
SMARCC1-202ENST00000425518 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.68□□□□□ -1.022e-7■■□□□ 11.9
SMARCC1-202ENST00000425518 CNNM1Q9NRU3 951 aa8.68□□□□□ -1.02
SMARCC1-202ENST00000425518 TOMM22Q9NS69 142 aa8.68□□□□□ -1.02
SMARCC1-202ENST00000425518 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.68□□□□□ -1.027e-11■■■□□ 16.3
SMARCC1-202ENST00000425518 NEDD4P46934 1319 aa8.68□□□□□ -1.02
SMARCC1-202ENST00000425518 FER1L4A9Z1Z3 1794 aa8.68□□□□□ -1.02
SMARCC1-202ENST00000425518 ERICH4A6NGS2 130 aa8.68□□□□□ -1.02
SMARCC1-202ENST00000425518 CDK11BP21127 795 aaKnown RBP8.68□□□□□ -1.02
SMARCC1-202ENST00000425518 CDC27P30260 824 aa8.68□□□□□ -1.02
SMARCC1-202ENST00000425518 IARSP41252 1262 aaKnown RBP8.68□□□□□ -1.02
SMARCC1-202ENST00000425518 ETF1P62495 437 aaKnown RBP8.68□□□□□ -1.02
SMARCC1-202ENST00000425518 MYL5Q02045 173 aa8.68□□□□□ -1.02
SMARCC1-202ENST00000425518 LONRF3Q496Y0 759 aa8.68□□□□□ -1.02
SMARCC1-202ENST00000425518 TBC1D10CQ8IV04 446 aa8.68□□□□□ -1.02
SMARCC1-202ENST00000425518 MNS1Q8NEH6 495 aa8.68□□□□□ -1.02
SMARCC1-202ENST00000425518 KDM4FA0A1W2PPD8 638 aa8.68□□□□□ -1.02
SMARCC1-202ENST00000425518 CCDC102BQ68D86 513 aa8.68□□□□□ -1.02
SMARCC1-202ENST00000425518 FBXL16Q8N461 479 aa8.68□□□□□ -1.02
SMARCC1-202ENST00000425518 SLC26A6Q9BXS9 759 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms