RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 NFXL1Q6ZNB6 911 aa13.55□□□□□ -0.24
UBR4-207ENST00000425413 C17orf53Q8N3J3 647 aaPredicted RBP13.55□□□□□ -0.24
UBR4-207ENST00000425413 C8orf76Q96K31 380 aa13.55□□□□□ -0.24
UBR4-207ENST00000425413 ZKSCAN3Q9BRR0 538 aa13.55□□□□□ -0.24
UBR4-207ENST00000425413 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.55□□□□□ -0.24
UBR4-207ENST00000425413 NEDD4P46934 1319 aa13.54□□□□□ -0.24
UBR4-207ENST00000425413 NTSR2O95665 410 aa13.54□□□□□ -0.24
UBR4-207ENST00000425413 ARID4AP29374 1257 aaPredicted RBP13.54□□□□□ -0.24
UBR4-207ENST00000425413 GYG1P46976 350 aa13.54□□□□□ -0.24
UBR4-207ENST00000425413 CHRNDQ07001 517 aa13.54□□□□□ -0.24
UBR4-207ENST00000425413 ERFEQ4G0M1 354 aa13.54□□□□□ -0.24
UBR4-207ENST00000425413 NAA16Q6N069 864 aaPredicted RBP13.54□□□□□ -0.24
UBR4-207ENST00000425413 ILDR1Q86SU0 546 aaPredicted RBP13.54□□□□□ -0.24
UBR4-207ENST00000425413 CCAR1Q8IX12 1150 aaKnown RBP13.54□□□□□ -0.24
UBR4-207ENST00000425413 PHKBQ93100 1093 aa13.54□□□□□ -0.24
UBR4-207ENST00000425413 NGLY1Q96IV0 654 aa13.54□□□□□ -0.24
UBR4-207ENST00000425413 STRBPQ96SI9 672 aaKnown RBP13.54□□□□□ -0.24
UBR4-207ENST00000425413 CDCA7Q9BWT1 371 aaPredicted RBP13.54□□□□□ -0.24
UBR4-207ENST00000425413 LRP2BPQ9P2M1 347 aa13.54□□□□□ -0.24
UBR4-207ENST00000425413 MRVI1Q9Y6F6 885 aa13.54□□□□□ -0.24
UBR4-207ENST00000425413 MAP3K12Q12852 859 aa13.54□□□□□ -0.24
UBR4-207ENST00000425413 CCDC82Q8N4S0 544 aa13.54□□□□□ -0.24
UBR4-207ENST00000425413 NAPBQ9H115 298 aa13.54□□□□□ -0.24
UBR4-207ENST00000425413 EPB41L4AQ9HCS5 686 aaPredicted RBP13.54□□□□□ -0.24
UBR4-207ENST00000425413 TCRBV5S4A2TA0A5A2 114 aa13.53□□□□□ -0.24
UBR4-207ENST00000425413 UBE2Q2LH0YL09 131 aa13.53□□□□□ -0.24
UBR4-207ENST00000425413 UBE3CQ15386 1083 aa13.53□□□□□ -0.24
UBR4-207ENST00000425413 LINC00116Q8NCU8 138 aa13.53□□□□□ -0.24
UBR4-207ENST00000425413 GOLPH3LQ9H4A5 285 aa13.53□□□□□ -0.24
UBR4-207ENST00000425413 DOT1LQ8TEK3 1739 aa13.53□□□□□ -0.24
UBR4-207ENST00000425413 SALL1Q9NSC2 1324 aa13.53□□□□□ -0.24
UBR4-207ENST00000425413 LCORLQ8N3X6 602 aa13.53□□□□□ -0.24
UBR4-207ENST00000425413 DNAJC25Q9H1X3 360 aa13.53□□□□□ -0.24
UBR4-207ENST00000425413 CLSTN2Q9H4D0 955 aa13.53□□□□□ -0.24
UBR4-207ENST00000425413 NUP98P52948 1817 aa13.53□□□□□ -0.24
UBR4-207ENST00000425413 LAMA4Q16363 1823 aa13.53□□□□□ -0.24
UBR4-207ENST00000425413 SMIM22K7EJ46 135 aa13.53□□□□□ -0.24
UBR4-207ENST00000425413 TDO2P48775 406 aa13.53□□□□□ -0.24
UBR4-207ENST00000425413 SRP68Q9UHB9 627 aaKnown RBP13.53□□□□□ -0.24
UBR4-207ENST00000425413 UVSSAQ2YD98 709 aa13.52□□□□□ -0.24
UBR4-207ENST00000425413 PARP10Q53GL7 1025 aa13.52□□□□□ -0.24
UBR4-207ENST00000425413 HS1BP3Q53T59 392 aa13.52□□□□□ -0.24
UBR4-207ENST00000425413 IFNL3Q8IZI9 196 aa13.52□□□□□ -0.24
UBR4-207ENST00000425413 DDX19AQ9NUU7 478 aaKnown RBP13.52□□□□□ -0.24
UBR4-207ENST00000425413 ANGEL1Q9UNK9 670 aaKnown RBP13.52□□□□□ -0.24
UBR4-207ENST00000425413 R3HCC1Q9Y3T6 440 aaKnown RBP13.52□□□□□ -0.24
UBR4-207ENST00000425413 METAP2P50579 478 aaKnown RBP eCLIP13.52□□□□□ -0.258e-7■□□□□ 10.5
UBR4-207ENST00000425413 SF3A1Q15459 793 aaKnown RBP13.52□□□□□ -0.25
UBR4-207ENST00000425413 SASS6Q6UVJ0 657 aa13.52□□□□□ -0.25
UBR4-207ENST00000425413 THRAP3Q9Y2W1 955 aaKnown RBP13.52□□□□□ -0.25
UBR4-207ENST00000425413 CLIC4Q9Y696 253 aa13.52□□□□□ -0.25
UBR4-207ENST00000425413 SLC4A4Q9Y6R1 1079 aa13.52□□□□□ -0.25
UBR4-207ENST00000425413 TMEM67Q5HYA8 995 aa13.51□□□□□ -0.25
UBR4-207ENST00000425413 TICAM2Q86XR7 235 aa13.51□□□□□ -0.25
UBR4-207ENST00000425413 FSIP1Q8NA03 581 aa13.51□□□□□ -0.25
UBR4-207ENST00000425413 ZNF512BQ96KM6 892 aaPredicted RBP13.51□□□□□ -0.25
UBR4-207ENST00000425413 CBX8Q9HC52 389 aa13.51□□□□□ -0.25
UBR4-207ENST00000425413 RAI14Q9P0K7 980 aa13.51□□□□□ -0.25
UBR4-207ENST00000425413 JAG2Q9Y219 1238 aa13.51□□□□□ -0.25
UBR4-207ENST00000425413 TACC3Q9Y6A5 838 aa13.51□□□□□ -0.25
UBR4-207ENST00000425413 KIF28PB7ZC32 967 aa13.51□□□□□ -0.25
UBR4-207ENST00000425413 DHX16O60231 1041 aaKnown RBP13.51□□□□□ -0.25
UBR4-207ENST00000425413 CDC27P30260 824 aa13.51□□□□□ -0.25
UBR4-207ENST00000425413 CCDC73Q6ZRK6 1079 aa13.51□□□□□ -0.25
UBR4-207ENST00000425413 CMTR1Q8N1G2 835 aaKnown RBP13.51□□□□□ -0.25
UBR4-207ENST00000425413 SDR42E1Q8WUS8 393 aa13.51□□□□□ -0.25
UBR4-207ENST00000425413 ZNF396Q96N95 335 aaPredicted RBP13.51□□□□□ -0.25
UBR4-207ENST00000425413 ABCC12Q96J65 1359 aa13.51□□□□□ -0.25
UBR4-207ENST00000425413 A0A1B0GVL5 298 aa13.5□□□□□ -0.25
UBR4-207ENST00000425413 MINDY4BA8MYZ0 360 aa13.5□□□□□ -0.25
UBR4-207ENST00000425413 IFIT3O14879 490 aaKnown RBP13.5□□□□□ -0.25
UBR4-207ENST00000425413 VPS37DQ86XT2 251 aa13.5□□□□□ -0.25
UBR4-207ENST00000425413 FAM200AQ8TCP9 573 aa13.5□□□□□ -0.25
UBR4-207ENST00000425413 ZSWIM5Q9P217 1185 aa13.5□□□□□ -0.25
UBR4-207ENST00000425413 RCOR1Q9UKL0 485 aa13.5□□□□□ -0.25
UBR4-207ENST00000425413 NWD2Q9ULI1 1742 aa13.5□□□□□ -0.25
UBR4-207ENST00000425413 MYO5AQ9Y4I1 1855 aaKnown RBP13.5□□□□□ -0.25
UBR4-207ENST00000425413 CYP7A1P22680 504 aa13.5□□□□□ -0.25
UBR4-207ENST00000425413 STK38Q15208 465 aa13.5□□□□□ -0.25
UBR4-207ENST00000425413 APOA5Q6Q788 366 aa13.5□□□□□ -0.25
UBR4-207ENST00000425413 ZNF652Q9Y2D9 606 aa13.5□□□□□ -0.25
UBR4-207ENST00000425413 GSG1L2A8MUP6 293 aa13.5□□□□□ -0.25
UBR4-207ENST00000425413 PATL2C9JE40 543 aaKnown RBP13.5□□□□□ -0.25
UBR4-207ENST00000425413 SH2B2O14492 632 aaPredicted RBP13.5□□□□□ -0.25
UBR4-207ENST00000425413 TBC1D9BQ66K14 1250 aa13.5□□□□□ -0.25
UBR4-207ENST00000425413 ADGRA1Q86SQ6 560 aa13.5□□□□□ -0.25
UBR4-207ENST00000425413 ANKRD18AQ8IVF6 992 aa13.5□□□□□ -0.25
UBR4-207ENST00000425413 FBXO18Q8NFZ0 1043 aa13.5□□□□□ -0.25
UBR4-207ENST00000425413 ALG1Q9BT22 464 aa13.5□□□□□ -0.25
UBR4-207ENST00000425413 AKAP11Q9UKA4 1901 aa13.49□□□□□ -0.25
UBR4-207ENST00000425413 NPHP1O15259 732 aa13.49□□□□□ -0.25
UBR4-207ENST00000425413 PRKCSHP14314 528 aaPredicted RBP13.49□□□□□ -0.25
UBR4-207ENST00000425413 EVCP57679 992 aa13.49□□□□□ -0.25
UBR4-207ENST00000425413 GNL2Q13823 731 aaKnown RBP13.49□□□□□ -0.25
UBR4-207ENST00000425413 HSP90AA2PQ14568 343 aaPredicted RBP13.49□□□□□ -0.25
UBR4-207ENST00000425413 SLC51AQ86UW1 340 aa13.49□□□□□ -0.25
UBR4-207ENST00000425413 CELF1Q92879 486 aaKnown RBP13.49□□□□□ -0.25
UBR4-207ENST00000425413 PCDHA7Q9UN72 937 aa13.49□□□□□ -0.25
UBR4-207ENST00000425413 MYH14Q7Z406 1995 aaKnown RBP13.49□□□□□ -0.25
UBR4-207ENST00000425413 GOLGA8AA7E2F4 631 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms