RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 EIF6P56537 245 aaKnown RBP7□□□□□ -1.29
VPS8-205ENST00000424721 FKBP4Q02790 459 aaKnown RBP eCLIP7□□□□□ -1.29
VPS8-205ENST00000424721 NNTQ13423 1086 aa7□□□□□ -1.29
VPS8-205ENST00000424721 PPP1R42Q7Z4L9 355 aa7□□□□□ -1.29
VPS8-205ENST00000424721 LDHDQ86WU2 507 aa7□□□□□ -1.29
VPS8-205ENST00000424721 RNF135Q8IUD6 432 aa7□□□□□ -1.29
VPS8-205ENST00000424721 HPS1Q92902 700 aa7□□□□□ -1.29
VPS8-205ENST00000424721 AIDAQ96BJ3 306 aa7□□□□□ -1.29
VPS8-205ENST00000424721 UCN2Q96RP3 112 aa7□□□□□ -1.29
VPS8-205ENST00000424721 KCTD15Q96SI1 283 aaPredicted RBP7□□□□□ -1.29
VPS8-205ENST00000424721 VPS33BQ9H267 617 aa7□□□□□ -1.29
VPS8-205ENST00000424721 CEP126Q9P2H0 1117 aa7□□□□□ -1.29
VPS8-205ENST00000424721 COL5A3P25940 1745 aaPredicted RBP7□□□□□ -1.29
VPS8-205ENST00000424721 ATP9BO43861 1147 aa6.99□□□□□ -1.29
VPS8-205ENST00000424721 DDNO94850 711 aaPredicted RBP6.99□□□□□ -1.29
VPS8-205ENST00000424721 NR3C2P08235 984 aa6.99□□□□□ -1.29
VPS8-205ENST00000424721 MCM10Q7L590 875 aa6.99□□□□□ -1.29
VPS8-205ENST00000424721 SYNE4Q8N205 404 aa6.99□□□□□ -1.29
VPS8-205ENST00000424721 RPGRQ92834 1020 aaKnown RBP6.99□□□□□ -1.29
VPS8-205ENST00000424721 RBM17Q96I25 401 aaKnown RBP6.99□□□□□ -1.29
VPS8-205ENST00000424721 PPP1R12CQ9BZL4 782 aa6.99□□□□□ -1.29
VPS8-205ENST00000424721 HACL1Q9UJ83 578 aa6.99□□□□□ -1.29
VPS8-205ENST00000424721 RRP7AQ9Y3A4 280 aaKnown RBP6.99□□□□□ -1.29
VPS8-205ENST00000424721 SCN11AQ9UI33 1791 aa6.99□□□□□ -1.29
VPS8-205ENST00000424721 CEP350Q5VT06 3117 aa6.99□□□□□ -1.29
VPS8-205ENST00000424721 ARFGEF1Q9Y6D6 1849 aa6.99□□□□□ -1.29
VPS8-205ENST00000424721 MAPK8IP3Q9UPT6 1336 aa6.99□□□□□ -1.29
VPS8-205ENST00000424721 MRC1P22897 1456 aa6.98□□□□□ -1.29
VPS8-205ENST00000424721 PALM3A6NDB9 673 aaPredicted RBP6.98□□□□□ -1.29
VPS8-205ENST00000424721 TMEM88BA6NKF7 163 aa6.98□□□□□ -1.29
VPS8-205ENST00000424721 FAM177BA6PVY3 158 aa6.98□□□□□ -1.29
VPS8-205ENST00000424721 POTECB2RU33 542 aa6.98□□□□□ -1.29
VPS8-205ENST00000424721 KCNQ3O43525 872 aa6.98□□□□□ -1.29
VPS8-205ENST00000424721 SKIP12755 728 aa6.98□□□□□ -1.29
VPS8-205ENST00000424721 LMOD1P29536 600 aaPredicted RBP6.98□□□□□ -1.29
VPS8-205ENST00000424721 RAB15P59190 212 aa6.98□□□□□ -1.29
VPS8-205ENST00000424721 HTRA3P83110 453 aa6.98□□□□□ -1.29
VPS8-205ENST00000424721 LMOD3Q0VAK6 560 aa6.98□□□□□ -1.29
VPS8-205ENST00000424721 NR5A1Q13285 461 aa6.98□□□□□ -1.29
VPS8-205ENST00000424721 MAP7D1Q3KQU3 841 aa6.98□□□□□ -1.29
VPS8-205ENST00000424721 GPC2Q8N158 579 aa6.98□□□□□ -1.29
VPS8-205ENST00000424721 NGEFQ8N5V2 710 aa6.98□□□□□ -1.29
VPS8-205ENST00000424721 SUPT20HQ8NEM7 779 aa6.98□□□□□ -1.29
VPS8-205ENST00000424721 C7orf43Q8WVR3 580 aa6.98□□□□□ -1.29
VPS8-205ENST00000424721 NLRP3Q96P20 1036 aa6.98□□□□□ -1.29
VPS8-205ENST00000424721 PSMD1Q99460 953 aa6.98□□□□□ -1.29
VPS8-205ENST00000424721 CHMP4AQ9BY43 222 aa6.98□□□□□ -1.29
VPS8-205ENST00000424721 BABAM1Q9NWV8 329 aa6.98□□□□□ -1.29
VPS8-205ENST00000424721 ESPNB1AK53 854 aa6.97□□□□□ -1.29
VPS8-205ENST00000424721 LZTS3O60299 673 aaPredicted RBP6.97□□□□□ -1.29
VPS8-205ENST00000424721 HSPA1AP0DMV8 641 aaKnown RBP6.97□□□□□ -1.29
VPS8-205ENST00000424721 HSPA1BP0DMV9 641 aaKnown RBP6.97□□□□□ -1.29
VPS8-205ENST00000424721 IARSP41252 1262 aaKnown RBP6.97□□□□□ -1.29
VPS8-205ENST00000424721 PRELPP51888 382 aa6.97□□□□□ -1.29
VPS8-205ENST00000424721 DHX9Q08211 1270 aaKnown RBP6.97□□□□□ -1.29
VPS8-205ENST00000424721 PARP10Q53GL7 1025 aa6.97□□□□□ -1.29
VPS8-205ENST00000424721 EAPPQ56P03 285 aaPredicted RBP6.97□□□□□ -1.29
VPS8-205ENST00000424721 HSP90AB3PQ58FF7 597 aa6.97□□□□□ -1.29
VPS8-205ENST00000424721 INTS6LQ5JSJ4 861 aaKnown RBP6.97□□□□□ -1.29
VPS8-205ENST00000424721 COL13A1Q5TAT6 717 aaPredicted RBP6.97□□□□□ -1.29
VPS8-205ENST00000424721 CRAMP1Q96RY5 1269 aa6.97□□□□□ -1.29
VPS8-205ENST00000424721 TAF1DQ9H5J8 278 aaPredicted RBP6.97□□□□□ -1.29
VPS8-205ENST00000424721 DOLKQ9UPQ8 538 aa6.97□□□□□ -1.29
VPS8-205ENST00000424721 ERBB4Q15303 1308 aa6.97□□□□□ -1.29
VPS8-205ENST00000424721 USP17L5A8MUK1 530 aa6.96□□□□□ -1.3
VPS8-205ENST00000424721 FZD9O00144 591 aa6.96□□□□□ -1.3
VPS8-205ENST00000424721 BBOX1O75936 387 aa6.96□□□□□ -1.3
VPS8-205ENST00000424721 AVPP01185 164 aa6.96□□□□□ -1.3
VPS8-205ENST00000424721 HSP90B1P14625 803 aaKnown RBP6.96□□□□□ -1.3
VPS8-205ENST00000424721 HOXA10P31260 410 aaPredicted RBP6.96□□□□□ -1.3
VPS8-205ENST00000424721 EPHX2P34913 555 aa6.96□□□□□ -1.3
VPS8-205ENST00000424721 CTCFP49711 727 aaPredicted RBP6.96□□□□□ -1.3
VPS8-205ENST00000424721 MAP2K1Q02750 393 aaPredicted RBP6.96□□□□□ -1.3
VPS8-205ENST00000424721 DCTN1Q14203 1278 aa6.96□□□□□ -1.3
VPS8-205ENST00000424721 NFE2L2Q16236 605 aa6.96□□□□□ -1.3
VPS8-205ENST00000424721 DEFB115Q30KQ5 88 aa6.96□□□□□ -1.3
VPS8-205ENST00000424721 NBPF10Q6P3W6 841 aaKnown RBP6.96□□□□□ -1.3
VPS8-205ENST00000424721 TBC1D9Q6ZT07 1266 aa6.96□□□□□ -1.3
VPS8-205ENST00000424721 PLEKHM2Q8IWE5 1019 aa6.96□□□□□ -1.3
VPS8-205ENST00000424721 CCDC116Q8IYX3 515 aa6.96□□□□□ -1.3
VPS8-205ENST00000424721 CNTROBQ8N137 903 aa6.96□□□□□ -1.3
VPS8-205ENST00000424721 LARGE2Q8N3Y3 721 aa6.96□□□□□ -1.3
VPS8-205ENST00000424721 NBPF15Q8N660 670 aa6.96□□□□□ -1.3
VPS8-205ENST00000424721 PLPP7Q8NBV4 271 aa6.96□□□□□ -1.3
VPS8-205ENST00000424721 PRDM10Q9NQV6 1147 aa6.96□□□□□ -1.3
VPS8-205ENST00000424721 ZNF277Q9NRM2 450 aaPredicted RBP6.96□□□□□ -1.3
VPS8-205ENST00000424721 MIS18AQ9NYP9 233 aa6.96□□□□□ -1.3
VPS8-205ENST00000424721 MAFBQ9Y5Q3 323 aaPredicted RBP6.96□□□□□ -1.3
VPS8-205ENST00000424721 MAP3K15Q6ZN16 1313 aa6.96□□□□□ -1.3
VPS8-205ENST00000424721 TJP1Q07157 1748 aa6.96□□□□□ -1.3
VPS8-205ENST00000424721 USP17L3A6NCW0 530 aa6.95□□□□□ -1.3
VPS8-205ENST00000424721 USP17L4A6NCW7 530 aa6.95□□□□□ -1.3
VPS8-205ENST00000424721 PIK3CDO00329 1044 aa6.95□□□□□ -1.3
VPS8-205ENST00000424721 ST8SIA5O15466 376 aa6.95□□□□□ -1.3
VPS8-205ENST00000424721 MYL6BP14649 208 aa6.95□□□□□ -1.3
VPS8-205ENST00000424721 ECE1P42892 770 aa6.95□□□□□ -1.3
VPS8-205ENST00000424721 PIP4K2AP48426 406 aaPredicted RBP6.95□□□□□ -1.3
VPS8-205ENST00000424721 WDR4P57081 412 aaKnown RBP6.95□□□□□ -1.3
VPS8-205ENST00000424721 EIF4A1P60842 406 aaKnown RBP6.95□□□□□ -1.3
VPS8-205ENST00000424721 RALBP1Q15311 655 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms