RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 ZBTB48P10074 688 aaPredicted RBP23.14■■□□□ 1.29
SREBF1-206ENST00000423161 BCAMP50895 628 aa23.14■■□□□ 1.29
SREBF1-206ENST00000423161 PUM3Q15397 648 aaKnown RBP23.14■■□□□ 1.29
SREBF1-206ENST00000423161 KIF16BQ96L93 1317 aa23.13■■□□□ 1.29
SREBF1-206ENST00000423161 GPR25O00155 361 aa23.13■■□□□ 1.29
SREBF1-206ENST00000423161 USP2O75604 605 aaPredicted RBP23.13■■□□□ 1.29
SREBF1-206ENST00000423161 IFIT1P09914 478 aaKnown RBP23.13■■□□□ 1.29
SREBF1-206ENST00000423161 RFX5P48382 616 aaPredicted RBP23.13■■□□□ 1.29
SREBF1-206ENST00000423161 NOM1Q5C9Z4 860 aaKnown RBP23.13■■□□□ 1.29
SREBF1-206ENST00000423161 CFHR5Q9BXR6 569 aa23.13■■□□□ 1.29
SREBF1-206ENST00000423161 TCP10L2B9ZVM9 353 aa23.12■■□□□ 1.29
SREBF1-206ENST00000423161 EYA2O00167 538 aa23.12■■□□□ 1.29
SREBF1-206ENST00000423161 UBTFL1P0CB47 393 aaPredicted RBP23.12■■□□□ 1.29
SREBF1-206ENST00000423161 FGFR2P21802 821 aa23.12■■□□□ 1.29
SREBF1-206ENST00000423161 ALDH1A1P00352 501 aa23.11■■□□□ 1.29
SREBF1-206ENST00000423161 TNNI2P48788 182 aa23.11■■□□□ 1.29
SREBF1-206ENST00000423161 INHBEP58166 350 aa23.11■■□□□ 1.29
SREBF1-206ENST00000423161 HDLBPQ00341 1268 aaKnown RBP23.11■■□□□ 1.29
SREBF1-206ENST00000423161 ANKRD13AQ8IZ07 590 aa23.11■■□□□ 1.29
SREBF1-206ENST00000423161 TEKT1Q969V4 418 aa23.11■■□□□ 1.29
SREBF1-206ENST00000423161 NOB1Q9ULX3 412 aaKnown RBP23.11■■□□□ 1.29
SREBF1-206ENST00000423161 CCER2I3L3R5 266 aa23.1■■□□□ 1.29
SREBF1-206ENST00000423161 SLC5A1P13866 664 aa23.1■■□□□ 1.29
SREBF1-206ENST00000423161 IFNL1Q8IU54 200 aa23.1■■□□□ 1.29
SREBF1-206ENST00000423161 TEPSINQ96N21 525 aa23.1■■□□□ 1.29
SREBF1-206ENST00000423161 TMEM39BQ9GZU3 492 aa23.1■■□□□ 1.29
SREBF1-206ENST00000423161 R3HDMLQ9H3Y0 253 aa23.1■■□□□ 1.29
SREBF1-206ENST00000423161 FKTNO75072 461 aa23.09■■□□□ 1.29
SREBF1-206ENST00000423161 PKN2Q16513 984 aaKnown RBP23.09■■□□□ 1.29
SREBF1-206ENST00000423161 ATG9AQ7Z3C6 839 aa23.09■■□□□ 1.29
SREBF1-206ENST00000423161 CDAN1Q8IWY9 1227 aa23.09■■□□□ 1.29
SREBF1-206ENST00000423161 API5Q9BZZ5 524 aaKnown RBP23.09■■□□□ 1.29
SREBF1-206ENST00000423161 MAST3O60307 1309 aa23.08■■□□□ 1.29
SREBF1-206ENST00000423161 GJA5P36382 358 aa23.08■■□□□ 1.29
SREBF1-206ENST00000423161 SOX10P56693 466 aa23.08■■□□□ 1.29
SREBF1-206ENST00000423161 LPIN2Q92539 896 aa23.08■■□□□ 1.29
SREBF1-206ENST00000423161 SIL1Q9H173 461 aa23.08■■□□□ 1.29
SREBF1-206ENST00000423161 HPS5Q9UPZ3 1129 aa23.08■■□□□ 1.29
SREBF1-206ENST00000423161 IGF2BP3O00425 579 aaKnown RBP eCLIP23.07■■□□□ 1.28
SREBF1-206ENST00000423161 CACNB3P54284 484 aa23.07■■□□□ 1.28
SREBF1-206ENST00000423161 ELP3Q9H9T3 547 aa23.07■■□□□ 1.28
SREBF1-206ENST00000423161 SUGT1Q9Y2Z0 365 aa23.07■■□□□ 1.28
SREBF1-206ENST00000423161 AK9Q5TCS8 1911 aa23.07■■□□□ 1.28
SREBF1-206ENST00000423161 TNRC18O15417 2968 aaPredicted RBP23.06■■□□□ 1.28
SREBF1-206ENST00000423161 ZDHHC15Q96MV8 337 aa23.06■■□□□ 1.28
SREBF1-206ENST00000423161 TMOD2Q9NZR1 351 aa23.06■■□□□ 1.28
SREBF1-206ENST00000423161 FBXO3Q9UK99 471 aa23.06■■□□□ 1.28
SREBF1-206ENST00000423161 LRRFIP2Q9Y608 721 aaKnown RBP23.06■■□□□ 1.28
SREBF1-206ENST00000423161 CIAO1O76071 339 aa23.05■■□□□ 1.28
SREBF1-206ENST00000423161 RARSP54136 660 aaKnown RBP23.05■■□□□ 1.28
SREBF1-206ENST00000423161 ATP2B3Q16720 1220 aa23.05■■□□□ 1.28
SREBF1-206ENST00000423161 WDR66Q8TBY9 1149 aa23.05■■□□□ 1.28
SREBF1-206ENST00000423161 OPTNQ96CV9 577 aa23.05■■□□□ 1.28
SREBF1-206ENST00000423161 MRIQ9BWK5 157 aa23.05■■□□□ 1.28
SREBF1-206ENST00000423161 HDAC5Q9UQL6 1122 aa23.05■■□□□ 1.28
SREBF1-206ENST00000423161 OTUD7BQ6GQQ9 843 aa23.04■■□□□ 1.28
SREBF1-206ENST00000423161 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.04■■□□□ 1.28
SREBF1-206ENST00000423161 CEP126Q9P2H0 1117 aa23.04■■□□□ 1.28
SREBF1-206ENST00000423161 PDE4DIPQ5VU43 2346 aa23.03■■□□□ 1.28
SREBF1-206ENST00000423161 APOBEC3HQ6NTF7 200 aaKnown RBP23.03■■□□□ 1.28
SREBF1-206ENST00000423161 FBXO46Q6PJ61 603 aaPredicted RBP23.03■■□□□ 1.28
SREBF1-206ENST00000423161 HHIPL2Q6UWX4 724 aa23.03■■□□□ 1.28
SREBF1-206ENST00000423161 MEIS3Q99687 375 aa23.03■■□□□ 1.28
SREBF1-206ENST00000423161 MYH2Q9UKX2 1941 aa23.02■■□□□ 1.28
SREBF1-206ENST00000423161 MAP3K9P80192 1104 aa23.02■■□□□ 1.28
SREBF1-206ENST00000423161 VGLL4Q14135 290 aa23.02■■□□□ 1.28
SREBF1-206ENST00000423161 FAM83AQ86UY5 434 aa23.02■■□□□ 1.28
SREBF1-206ENST00000423161 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.02■■□□□ 1.28
SREBF1-206ENST00000423161 PA2G4Q9UQ80 394 aaKnown RBP23.02■■□□□ 1.28
SREBF1-206ENST00000423161 CSADQ9Y600 493 aa23.02■■□□□ 1.28
SREBF1-206ENST00000423161 TESPA1A2RU30 521 aaPredicted RBP23.01■■□□□ 1.27
SREBF1-206ENST00000423161 FKBP1CQ5VVH2 108 aa23.01■■□□□ 1.27
SREBF1-206ENST00000423161 CNKSR2Q8WXI2 1034 aa23.01■■□□□ 1.27
SREBF1-206ENST00000423161 IL15P40933 162 aaPredicted RBP23■■□□□ 1.27
SREBF1-206ENST00000423161 CRHR2Q13324 411 aa23■■□□□ 1.27
SREBF1-206ENST00000423161 PTPN18Q99952 460 aa23■■□□□ 1.27
SREBF1-206ENST00000423161 GNL3LQ9NVN8 582 aaKnown RBP23■■□□□ 1.27
SREBF1-206ENST00000423161 RPAP1Q9BWH6 1393 aaPredicted RBP23■■□□□ 1.27
SREBF1-206ENST00000423161 INTS3Q68E01 1043 aaKnown RBP22.99■■□□□ 1.27
SREBF1-206ENST00000423161 ARHGAP45Q92619 1136 aa22.99■■□□□ 1.27
SREBF1-206ENST00000423161 HOOK2Q96ED9 719 aa22.99■■□□□ 1.27
SREBF1-206ENST00000423161 MS4A4AQ96JQ5 239 aa22.99■■□□□ 1.27
SREBF1-206ENST00000423161 COPRSQ9NQ92 184 aa22.99■■□□□ 1.27
SREBF1-206ENST00000423161 PRDX5P30044 214 aa22.98■■□□□ 1.27
SREBF1-206ENST00000423161 PHKA1P46020 1223 aa22.98■■□□□ 1.27
SREBF1-206ENST00000423161 DIXDC1Q155Q3 683 aa22.98■■□□□ 1.27
SREBF1-206ENST00000423161 OTUD5Q96G74 571 aa22.98■■□□□ 1.27
SREBF1-206ENST00000423161 WRNIP1Q96S55 665 aa22.98■■□□□ 1.27
SREBF1-206ENST00000423161 DAGLAQ9Y4D2 1042 aa22.98■■□□□ 1.27
SREBF1-206ENST00000423161 TRIM17Q9Y577 477 aa22.98■■□□□ 1.27
SREBF1-206ENST00000423161 LDHBP07195 334 aaKnown RBP22.97■■□□□ 1.27
SREBF1-206ENST00000423161 GNAI3P08754 354 aa22.97■■□□□ 1.27
SREBF1-206ENST00000423161 GTF2A2P52657 109 aa22.97■■□□□ 1.27
SREBF1-206ENST00000423161 BRI3BPQ8WY22 251 aa22.97■■□□□ 1.27
SREBF1-206ENST00000423161 ERO1AQ96HE7 468 aa22.97■■□□□ 1.27
SREBF1-206ENST00000423161 DENND2AQ9ULE3 1009 aa22.97■■□□□ 1.27
SREBF1-206ENST00000423161 CCL15-CCL14A0A0B4J2E2 113 aa22.96■■□□□ 1.27
SREBF1-206ENST00000423161 SPDYE5A6NIY4 337 aa22.96■■□□□ 1.27
SREBF1-206ENST00000423161 SEMA3EO15041 775 aa22.96■■□□□ 1.27
SREBF1-206ENST00000423161 CCL15Q16663 113 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms