RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 ZNF280AP59817 542 aaPredicted RBP20.67■□□□□ 0.9
COL7A1-202ENST00000422991 SPTY2D1Q68D10 685 aaPredicted RBP20.67■□□□□ 0.9
COL7A1-202ENST00000422991 MICALL2Q8IY33 904 aa20.67■□□□□ 0.9
COL7A1-202ENST00000422991 EDC3Q96F86 508 aaKnown RBP20.67■□□□□ 0.9
COL7A1-202ENST00000422991 ABCF2Q9UG63 623 aa20.67■□□□□ 0.9
COL7A1-202ENST00000422991 CEP350Q5VT06 3117 aa20.67■□□□□ 0.9
COL7A1-202ENST00000422991 MYH2Q9UKX2 1941 aa20.66■□□□□ 0.9
COL7A1-202ENST00000422991 F8W031 263 aaPredicted RBP20.66■□□□□ 0.9
COL7A1-202ENST00000422991 USP17L8P0C7I0 530 aa20.66■□□□□ 0.9
COL7A1-202ENST00000422991 LMOD1P29536 600 aaPredicted RBP20.66■□□□□ 0.9
COL7A1-202ENST00000422991 TTF1Q15361 905 aaPredicted RBP20.66■□□□□ 0.9
COL7A1-202ENST00000422991 CNOT7Q9UIV1 285 aaKnown RBP20.66■□□□□ 0.9
COL7A1-202ENST00000422991 TTF2Q9UNY4 1162 aaKnown RBP20.66■□□□□ 0.9
COL7A1-202ENST00000422991 MAST3O60307 1309 aa20.66■□□□□ 0.9
COL7A1-202ENST00000422991 ECM29Q5VYK3 1845 aa20.65■□□□□ 0.9
COL7A1-202ENST00000422991 POTECB2RU33 542 aa20.65■□□□□ 0.9
COL7A1-202ENST00000422991 MMP14P50281 582 aa20.65■□□□□ 0.9
COL7A1-202ENST00000422991 ERICH6Q7L0X2 663 aa20.65■□□□□ 0.9
COL7A1-202ENST00000422991 LRP2BPQ9P2M1 347 aa20.65■□□□□ 0.9
COL7A1-202ENST00000422991 IQCA1LA6NCM1 817 aa20.64■□□□□ 0.89
COL7A1-202ENST00000422991 EPS15P42566 896 aa20.64■□□□□ 0.89
COL7A1-202ENST00000422991 FSTL1Q12841 308 aa20.64■□□□□ 0.89
COL7A1-202ENST00000422991 OGFOD1Q8N543 542 aa20.64■□□□□ 0.89
COL7A1-202ENST00000422991 HACL1Q9UJ83 578 aa20.64■□□□□ 0.89
COL7A1-202ENST00000422991 HDAC9Q9UKV0 1011 aa20.64■□□□□ 0.89
COL7A1-202ENST00000422991 IGSF3O75054 1194 aa20.63■□□□□ 0.89
COL7A1-202ENST00000422991 IDH1O75874 414 aaKnown RBP20.63■□□□□ 0.89
COL7A1-202ENST00000422991 MAP4K4O95819 1239 aaPredicted RBP20.63■□□□□ 0.89
COL7A1-202ENST00000422991 MECOMQ03112 1051 aa20.63■□□□□ 0.89
COL7A1-202ENST00000422991 TTC22Q5TAA0 569 aa20.63■□□□□ 0.89
COL7A1-202ENST00000422991 DZIP1Q86YF9 867 aaKnown RBP20.63■□□□□ 0.89
COL7A1-202ENST00000422991 ZNF384Q8TF68 577 aa20.63■□□□□ 0.89
COL7A1-202ENST00000422991 RAI14Q9P0K7 980 aa20.63■□□□□ 0.89
COL7A1-202ENST00000422991 H7C1D1 291 aa20.62■□□□□ 0.89
COL7A1-202ENST00000422991 HDLBPQ00341 1268 aaKnown RBP20.62■□□□□ 0.89
COL7A1-202ENST00000422991 KBTBD3Q8NAB2 608 aa20.62■□□□□ 0.89
COL7A1-202ENST00000422991 NSUN4Q96CB9 384 aaKnown RBP20.62■□□□□ 0.89
COL7A1-202ENST00000422991 ADARB2Q9NS39 739 aaKnown RBP20.62■□□□□ 0.89
COL7A1-202ENST00000422991 SERPINA10Q9UK55 444 aa20.62■□□□□ 0.89
COL7A1-202ENST00000422991 GSPT1P15170 499 aaKnown RBP20.61■□□□□ 0.89
COL7A1-202ENST00000422991 CRKP46108 304 aa20.61■□□□□ 0.89
COL7A1-202ENST00000422991 RGS3P49796 1198 aa20.61■□□□□ 0.89
COL7A1-202ENST00000422991 MAP3K12Q12852 859 aa20.61■□□□□ 0.89
COL7A1-202ENST00000422991 DIXDC1Q155Q3 683 aa20.61■□□□□ 0.89
COL7A1-202ENST00000422991 SMC1BQ8NDV3 1235 aa20.61■□□□□ 0.89
COL7A1-202ENST00000422991 TAF1DQ9H5J8 278 aaPredicted RBP20.61■□□□□ 0.89
COL7A1-202ENST00000422991 MYOZ2Q9NPC6 264 aa20.61■□□□□ 0.89
COL7A1-202ENST00000422991 GAKO14976 1311 aa20.6■□□□□ 0.89
COL7A1-202ENST00000422991 EGFRP00533 1210 aa20.6■□□□□ 0.89
COL7A1-202ENST00000422991 EPHX2P34913 555 aa20.6■□□□□ 0.89
COL7A1-202ENST00000422991 HHIPL2Q6UWX4 724 aa20.6■□□□□ 0.89
COL7A1-202ENST00000422991 SAMD7Q7Z3H4 446 aa20.6■□□□□ 0.89
COL7A1-202ENST00000422991 MTMR14Q8NCE2 650 aa20.6■□□□□ 0.89
COL7A1-202ENST00000422991 TRPM4Q8TD43 1214 aa20.6■□□□□ 0.89
COL7A1-202ENST00000422991 TEKT1Q969V4 418 aa20.6■□□□□ 0.89
COL7A1-202ENST00000422991 ZBED3Q96IU2 234 aaPredicted RBP20.6■□□□□ 0.89
COL7A1-202ENST00000422991 MRIQ9BWK5 157 aa20.6■□□□□ 0.89
COL7A1-202ENST00000422991 MROH7-TTC4A0A0A0MT08 1334 aa20.59■□□□□ 0.89
COL7A1-202ENST00000422991 PDE6AP16499 860 aa20.59■□□□□ 0.89
COL7A1-202ENST00000422991 GSTO1P78417 241 aa20.59■□□□□ 0.89
COL7A1-202ENST00000422991 KIF4BQ2VIQ3 1234 aa20.59■□□□□ 0.89
COL7A1-202ENST00000422991 CFAP100Q494V2 611 aa20.59■□□□□ 0.89
COL7A1-202ENST00000422991 TBC1D10BQ4KMP7 808 aaPredicted RBP20.59■□□□□ 0.89
COL7A1-202ENST00000422991 NAA16Q6N069 864 aaPredicted RBP20.59■□□□□ 0.89
COL7A1-202ENST00000422991 TMED8Q6PL24 325 aaPredicted RBP20.59■□□□□ 0.89
COL7A1-202ENST00000422991 SLF2Q8IX21 1173 aa20.59■□□□□ 0.89
COL7A1-202ENST00000422991 EVI5LQ96CN4 794 aa20.59■□□□□ 0.89
COL7A1-202ENST00000422991 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.59■□□□□ 0.89
COL7A1-202ENST00000422991 DAGLAQ9Y4D2 1042 aa20.59■□□□□ 0.89
COL7A1-202ENST00000422991 PCDHAC2Q9Y5I4 1007 aa20.59■□□□□ 0.89
COL7A1-202ENST00000422991 RFX7Q2KHR2 1363 aa20.59■□□□□ 0.89
COL7A1-202ENST00000422991 SPDYE2BA6NHP3 402 aa20.58■□□□□ 0.89
COL7A1-202ENST00000422991 TRIM6-TRIM34B2RNG4 842 aa20.58■□□□□ 0.89
COL7A1-202ENST00000422991 SPDYE6P0CI01 402 aa20.58■□□□□ 0.89
COL7A1-202ENST00000422991 APLP1P51693 650 aa20.58■□□□□ 0.89
COL7A1-202ENST00000422991 DLGAP5Q15398 846 aa20.58■□□□□ 0.89
COL7A1-202ENST00000422991 CNTROBQ8N137 903 aa20.58■□□□□ 0.89
COL7A1-202ENST00000422991 MAGEB6Q8N7X4 407 aa20.58■□□□□ 0.89
COL7A1-202ENST00000422991 ZDHHC15Q96MV8 337 aa20.58■□□□□ 0.89
COL7A1-202ENST00000422991 FSD1Q9BTV5 496 aa20.58■□□□□ 0.89
COL7A1-202ENST00000422991 RBM5P52756 815 aaKnown RBP eCLIP20.57■□□□□ 0.88
COL7A1-202ENST00000422991 SLC9C2Q5TAH2 1124 aa20.57■□□□□ 0.88
COL7A1-202ENST00000422991 USP50Q70EL3 339 aaPredicted RBP20.57■□□□□ 0.88
COL7A1-202ENST00000422991 FAM163AQ96GL9 167 aaPredicted RBP20.57■□□□□ 0.88
COL7A1-202ENST00000422991 TCRBV5S4A2TA0A5A2 114 aa20.56■□□□□ 0.88
COL7A1-202ENST00000422991 LDHCP07864 332 aa20.56■□□□□ 0.88
COL7A1-202ENST00000422991 CYP7A1P22680 504 aa20.56■□□□□ 0.88
COL7A1-202ENST00000422991 ADD2P35612 726 aa20.56■□□□□ 0.88
COL7A1-202ENST00000422991 HIRAP54198 1017 aaPredicted RBP20.56■□□□□ 0.88
COL7A1-202ENST00000422991 RBM26Q5T8P6 1007 aaKnown RBP20.56■□□□□ 0.88
COL7A1-202ENST00000422991 ADGRA1Q86SQ6 560 aa20.56■□□□□ 0.88
COL7A1-202ENST00000422991 CDK5RAP2Q96SN8 1893 aa20.56■□□□□ 0.88
COL7A1-202ENST00000422991 ZNF532Q9HCE3 1301 aa20.55■□□□□ 0.88
COL7A1-202ENST00000422991 WNT10BO00744 389 aa20.55■□□□□ 0.88
COL7A1-202ENST00000422991 CHGBP05060 677 aa20.55■□□□□ 0.88
COL7A1-202ENST00000422991 SDSP20132 328 aa20.55■□□□□ 0.88
COL7A1-202ENST00000422991 NBPF9Q3BBW0 867 aa20.55■□□□□ 0.88
COL7A1-202ENST00000422991 ZSCAN25Q6NSZ9 544 aa20.55■□□□□ 0.88
COL7A1-202ENST00000422991 APOBEC3HQ6NTF7 200 aaKnown RBP20.55■□□□□ 0.88
COL7A1-202ENST00000422991 PNMA8AQ86V59 439 aaPredicted RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms