RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 CNPY2Q9Y2B0 182 aa27.18■■□□□ 1.94
LSM8-203ENST00000422760 COL1A1P02452 1464 aaPredicted RBP27.18■■□□□ 1.94
LSM8-203ENST00000422760 ELP1O95163 1332 aa27.18■■□□□ 1.94
LSM8-203ENST00000422760 HAND2P61296 217 aa27.18■■□□□ 1.94
LSM8-203ENST00000422760 MAGEB6Q8N7X4 407 aa27.18■■□□□ 1.94
LSM8-203ENST00000422760 DTNBO60941 627 aa27.17■■□□□ 1.94
LSM8-203ENST00000422760 IQSEC3Q9UPP2 1182 aaPredicted RBP27.17■■□□□ 1.94
LSM8-203ENST00000422760 MYH13Q9UKX3 1938 aa27.16■■□□□ 1.94
LSM8-203ENST00000422760 TM4SF1P30408 202 aa27.16■■□□□ 1.94
LSM8-203ENST00000422760 RBM6P78332 1123 aaKnown RBP27.16■■□□□ 1.94
LSM8-203ENST00000422760 EXOSC10Q01780 885 aaKnown RBP27.16■■□□□ 1.94
LSM8-203ENST00000422760 BRF1Q92994 677 aa27.16■■□□□ 1.94
LSM8-203ENST00000422760 GYS1P13807 737 aa27.16■■□□□ 1.94
LSM8-203ENST00000422760 FGD1P98174 961 aa27.16■■□□□ 1.94
LSM8-203ENST00000422760 STK3Q13188 491 aa27.16■■□□□ 1.94
LSM8-203ENST00000422760 ZNF772Q68DY9 489 aaPredicted RBP27.16■■□□□ 1.94
LSM8-203ENST00000422760 AIDAQ96BJ3 306 aa27.16■■□□□ 1.94
LSM8-203ENST00000422760 GDPD2Q9HCC8 539 aa27.15■■□□□ 1.94
LSM8-203ENST00000422760 GNL3LQ9NVN8 582 aaKnown RBP27.15■■□□□ 1.94
LSM8-203ENST00000422760 KRT85P78386 507 aa27.14■■□□□ 1.94
LSM8-203ENST00000422760 CAVIN4Q5BKX8 364 aa27.14■■□□□ 1.94
LSM8-203ENST00000422760 GTF3C6Q969F1 213 aa27.14■■□□□ 1.94
LSM8-203ENST00000422760 TXNRD1Q16881 649 aa27.14■■□□□ 1.93
LSM8-203ENST00000422760 CHMP4CQ96CF2 233 aa27.14■■□□□ 1.93
LSM8-203ENST00000422760 AGXT2Q9BYV1 514 aa27.14■■□□□ 1.93
LSM8-203ENST00000422760 LARP1BQ659C4 914 aaKnown RBP27.13■■□□□ 1.93
LSM8-203ENST00000422760 PRR5LQ6MZQ0 368 aa27.13■■□□□ 1.93
LSM8-203ENST00000422760 STRBPQ96SI9 672 aaKnown RBP27.13■■□□□ 1.93
LSM8-203ENST00000422760 ANKRD2Q9GZV1 360 aa27.13■■□□□ 1.93
LSM8-203ENST00000422760 MBD4O95243 580 aa27.12■■□□□ 1.93
LSM8-203ENST00000422760 PROM2Q8N271 834 aa27.12■■□□□ 1.93
LSM8-203ENST00000422760 FAM84BQ96KN1 310 aaPredicted RBP27.12■■□□□ 1.93
LSM8-203ENST00000422760 ZNF213O14771 459 aa27.12■■□□□ 1.93
LSM8-203ENST00000422760 KLRK1P26718 216 aa27.12■■□□□ 1.93
LSM8-203ENST00000422760 VPS37DQ86XT2 251 aa27.12■■□□□ 1.93
LSM8-203ENST00000422760 LRP2BPQ9P2M1 347 aa27.12■■□□□ 1.93
LSM8-203ENST00000422760 APPP05067 770 aa27.11■■□□□ 1.93
LSM8-203ENST00000422760 SCAND2PQ9GZW5 306 aaPredicted RBP27.11■■□□□ 1.93
LSM8-203ENST00000422760 CHST3Q7LGC8 479 aa27.1■■□□□ 1.93
LSM8-203ENST00000422760 CACNA1SQ13698 1873 aa27.1■■□□□ 1.93
LSM8-203ENST00000422760 CHD4Q14839 1912 aa27.1■■□□□ 1.93
LSM8-203ENST00000422760 FIBPO43427 364 aa27.1■■□□□ 1.93
LSM8-203ENST00000422760 NBPF3Q9H094 633 aa27.1■■□□□ 1.93
LSM8-203ENST00000422760 APOBRQ0VD83 1088 aa27.09■■□□□ 1.93
LSM8-203ENST00000422760 MB21D2Q8IYB1 491 aaPredicted RBP27.09■■□□□ 1.93
LSM8-203ENST00000422760 ARMT1Q9H993 441 aa27.09■■□□□ 1.93
LSM8-203ENST00000422760 ZMYM6O95789 1325 aa27.09■■□□□ 1.93
LSM8-203ENST00000422760 VPS37CA5D8V6 355 aaPredicted RBP27.08■■□□□ 1.93
LSM8-203ENST00000422760 GRAPQ13588 217 aa27.08■■□□□ 1.93
LSM8-203ENST00000422760 FOXD4L6Q3SYB3 417 aaPredicted RBP27.08■■□□□ 1.93
LSM8-203ENST00000422760 FOXD4L3Q6VB84 417 aaPredicted RBP27.08■■□□□ 1.93
LSM8-203ENST00000422760 FBXO33Q7Z6M2 555 aa27.08■■□□□ 1.93
LSM8-203ENST00000422760 RNF214Q8ND24 703 aa27.08■■□□□ 1.93
LSM8-203ENST00000422760 GRAPLQ8TC17 118 aaPredicted RBP27.08■■□□□ 1.93
LSM8-203ENST00000422760 ABCF2Q9UG63 623 aa27.08■■□□□ 1.93
LSM8-203ENST00000422760 DENND2AQ9ULE3 1009 aa27.08■■□□□ 1.93
LSM8-203ENST00000422760 DNM1Q05193 864 aaKnown RBP27.08■■□□□ 1.93
LSM8-203ENST00000422760 NCOA7Q8NI08 942 aa27.08■■□□□ 1.93
LSM8-203ENST00000422760 EPB41L4AQ9HCS5 686 aaPredicted RBP27.08■■□□□ 1.93
LSM8-203ENST00000422760 PFKFB2O60825 505 aa27.07■■□□□ 1.92
LSM8-203ENST00000422760 SERPINB2P05120 415 aa27.07■■□□□ 1.92
LSM8-203ENST00000422760 SCRN1Q12765 414 aa27.07■■□□□ 1.92
LSM8-203ENST00000422760 RALYLQ86SE5 291 aaKnown RBP27.07■■□□□ 1.92
LSM8-203ENST00000422760 FBXL16Q8N461 479 aa27.07■■□□□ 1.92
LSM8-203ENST00000422760 LLPHQ9BRT6 129 aaKnown RBP27.07■■□□□ 1.92
LSM8-203ENST00000422760 PNPLA7Q6ZV29 1317 aa27.07■■□□□ 1.92
LSM8-203ENST00000422760 ALX1Q15699 326 aa27.06■■□□□ 1.92
LSM8-203ENST00000422760 TBC1D10CQ8IV04 446 aa27.06■■□□□ 1.92
LSM8-203ENST00000422760 LCORLQ8N3X6 602 aa27.06■■□□□ 1.92
LSM8-203ENST00000422760 SEMA3EO15041 775 aa27.06■■□□□ 1.92
LSM8-203ENST00000422760 ST5P78524 1137 aa27.06■■□□□ 1.92
LSM8-203ENST00000422760 TIAM2Q8IVF5 1701 aa27.05■■□□□ 1.92
LSM8-203ENST00000422760 PATL2C9JE40 543 aaKnown RBP27.05■■□□□ 1.92
LSM8-203ENST00000422760 FUCA2Q9BTY2 467 aa27.05■■□□□ 1.92
LSM8-203ENST00000422760 TFCP2L1Q9NZI6 479 aa27.05■■□□□ 1.92
LSM8-203ENST00000422760 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.05■■□□□ 1.92
LSM8-203ENST00000422760 RAI14Q9P0K7 980 aa27.05■■□□□ 1.92
LSM8-203ENST00000422760 KIF3AQ9Y496 699 aa27.05■■□□□ 1.92
LSM8-203ENST00000422760 PRC1O43663 620 aa27.04■■□□□ 1.92
LSM8-203ENST00000422760 JAK2O60674 1132 aa27.04■■□□□ 1.92
LSM8-203ENST00000422760 DDR1Q08345 913 aa27.04■■□□□ 1.92
LSM8-203ENST00000422760 CRY2Q49AN0 593 aa27.04■■□□□ 1.92
LSM8-203ENST00000422760 ADGRA1Q86SQ6 560 aa27.04■■□□□ 1.92
LSM8-203ENST00000422760 SLC51AQ86UW1 340 aa27.04■■□□□ 1.92
LSM8-203ENST00000422760 IFNL3Q8IZI9 196 aa27.04■■□□□ 1.92
LSM8-203ENST00000422760 MIGA1Q8NAN2 632 aa27.04■■□□□ 1.92
LSM8-203ENST00000422760 PTMAP06454 111 aaKnown RBP27.04■■□□□ 1.92
LSM8-203ENST00000422760 CYP7A1P22680 504 aa27.04■■□□□ 1.92
LSM8-203ENST00000422760 HIBADHP31937 336 aaKnown RBP27.04■■□□□ 1.92
LSM8-203ENST00000422760 ANTXR2P58335 489 aa27.04■■□□□ 1.92
LSM8-203ENST00000422760 RPGRQ92834 1020 aaKnown RBP27.04■■□□□ 1.92
LSM8-203ENST00000422760 NAPBQ9H115 298 aa27.04■■□□□ 1.92
LSM8-203ENST00000422760 PDS5AQ29RF7 1337 aaKnown RBP27.04■■□□□ 1.92
LSM8-203ENST00000422760 IRS2Q9Y4H2 1338 aa27.04■■□□□ 1.92
LSM8-203ENST00000422760 GSG1L2A8MUP6 293 aa27.03■■□□□ 1.92
LSM8-203ENST00000422760 CCDC192P0DO97 292 aa27.03■■□□□ 1.92
LSM8-203ENST00000422760 GNAT2P19087 354 aa27.03■■□□□ 1.92
LSM8-203ENST00000422760 HMGB2P26583 209 aaKnown RBP27.03■■□□□ 1.92
LSM8-203ENST00000422760 WDR19Q8NEZ3 1342 aa27.03■■□□□ 1.92
LSM8-203ENST00000422760 PLSCR1O15162 318 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms