RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 A0A1B0GUL7 405 aa12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 GSPT1P15170 499 aaKnown RBP12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 HOXC9P31274 260 aa12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 MCM7P33993 719 aa12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 CALML4Q96GE6 196 aa12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 FEZ1Q99689 392 aa12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 TSG101Q99816 390 aa12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 GUCA1BQ9UMX6 200 aa12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 PHKBQ93100 1093 aa12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 SPAG5Q96R06 1193 aa12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 GBP3Q9H0R5 595 aa12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 MCM9Q9NXL9 1143 aa12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 EDC4Q6P2E9 1401 aaKnown RBP12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 GOLGA6L10A0A0M3HER8 536 aa12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 IRS4O14654 1257 aaPredicted RBP12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 KIF5BP33176 963 aa12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 CCT6AP40227 531 aaKnown RBP12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 STAT6P42226 847 aa12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 ASIC1P78348 528 aa12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 CTR9Q6PD62 1173 aa12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 GTF3C6Q969F1 213 aa12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 SEC62Q99442 399 aaKnown RBP12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 TRIM75PA6NK02 468 aa12.1□□□□□ -0.47
SEMA4D-208ENST00000422704 CHL1O00533 1208 aa12.1□□□□□ -0.47
SEMA4D-208ENST00000422704 CD2BP2O95400 341 aaKnown RBP12.1□□□□□ -0.47
SEMA4D-208ENST00000422704 TSPY3P0CV98 308 aa12.1□□□□□ -0.47
SEMA4D-208ENST00000422704 TSPY8P0CW00 308 aa12.1□□□□□ -0.47
SEMA4D-208ENST00000422704 UBE4AQ14139 1066 aa12.1□□□□□ -0.47
SEMA4D-208ENST00000422704 MAATS1Q7Z4T9 603 aa12.1□□□□□ -0.47
SEMA4D-208ENST00000422704 CABP5Q9NP86 173 aa12.1□□□□□ -0.47
SEMA4D-208ENST00000422704 TAF5LO75529 589 aa12.1□□□□□ -0.47
SEMA4D-208ENST00000422704 ANKRD18AQ8IVF6 992 aa12.1□□□□□ -0.47
SEMA4D-208ENST00000422704 BMS1Q14692 1282 aaKnown RBP12.1□□□□□ -0.47
SEMA4D-208ENST00000422704 CDC37L1Q7L3B6 337 aa12.1□□□□□ -0.47
SEMA4D-208ENST00000422704 CADPS2Q86UW7 1296 aa12.1□□□□□ -0.47
SEMA4D-208ENST00000422704 ARFGAP3Q9NP61 516 aa12.1□□□□□ -0.47
SEMA4D-208ENST00000422704 RNF113AO15541 343 aaKnown RBP12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 SGSM2O43147 1006 aa12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 DZIP3Q86Y13 1208 aaKnown RBP12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 DDX21Q9NR30 783 aaKnown RBP eCLIP12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 CPSF1Q10570 1443 aaKnown RBP12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 IQSEC2Q5JU85 1478 aa12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 VWA3AA6NCI4 1184 aa12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 RFC4P35249 363 aa12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 ZNF174Q15697 407 aa12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 AKNAD1Q5T1N1 836 aa12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 SUCLG2Q96I99 432 aa12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 RABEP2Q9H5N1 569 aa12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 LMBRD1Q9NUN5 540 aa12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 SLC27A2O14975 620 aa12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 MBD4O95243 580 aa12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 PTCH1Q13635 1447 aa12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 INTS4Q96HW7 963 aaKnown RBP12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 PAXBP1Q9Y5B6 917 aa12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 FLT4P35916 1363 aa12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 A0A087WWV3 80 aa12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 RNMTO43148 476 aaKnown RBP12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 BAG3O95817 575 aa12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 ZFYP08048 801 aaPredicted RBP12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 CCDC152Q4G0S7 254 aa12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 ZNF790Q6PG37 636 aa12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 VPS36Q86VN1 386 aa12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 EEF2KMTQ96G04 330 aa12.09□□□□□ -0.47
SEMA4D-208ENST00000422704 RNASE9P60153 205 aaKnown RBP12.08□□□□□ -0.48
SEMA4D-208ENST00000422704 SF3B2Q13435 895 aaKnown RBP12.08□□□□□ -0.48
SEMA4D-208ENST00000422704 SYCP3Q8IZU3 236 aa12.08□□□□□ -0.48
SEMA4D-208ENST00000422704 RGS22Q8NE09 1264 aa12.08□□□□□ -0.48
SEMA4D-208ENST00000422704 ZNF496Q96IT1 587 aaPredicted RBP12.08□□□□□ -0.48
SEMA4D-208ENST00000422704 SCLT1Q96NL6 688 aa12.08□□□□□ -0.48
SEMA4D-208ENST00000422704 TBX22Q9Y458 520 aa12.08□□□□□ -0.48
SEMA4D-208ENST00000422704 MON2Q7Z3U7 1717 aa12.08□□□□□ -0.48
SEMA4D-208ENST00000422704 SHTN1A0MZ66 631 aa12.08□□□□□ -0.48
SEMA4D-208ENST00000422704 SLU7O95391 586 aaKnown RBP12.08□□□□□ -0.48
SEMA4D-208ENST00000422704 EIF6P56537 245 aaKnown RBP12.08□□□□□ -0.48
SEMA4D-208ENST00000422704 LONRF3Q496Y0 759 aa12.08□□□□□ -0.48
SEMA4D-208ENST00000422704 WWC2Q6AWC2 1192 aa12.08□□□□□ -0.48
SEMA4D-208ENST00000422704 KRT222Q8N1A0 295 aa12.08□□□□□ -0.48
SEMA4D-208ENST00000422704 CMTR1Q8N1G2 835 aaKnown RBP12.08□□□□□ -0.48
SEMA4D-208ENST00000422704 TXLNBQ8N3L3 684 aa12.08□□□□□ -0.48
SEMA4D-208ENST00000422704 CCDC150Q8NCX0 1101 aa12.08□□□□□ -0.48
SEMA4D-208ENST00000422704 NLRP3Q96P20 1036 aa12.08□□□□□ -0.48
SEMA4D-208ENST00000422704 CRNKL1Q9BZJ0 848 aaKnown RBP12.08□□□□□ -0.48
SEMA4D-208ENST00000422704 TTC41PQ6P2S7 1318 aa12.08□□□□□ -0.48
SEMA4D-208ENST00000422704 ITSN1Q15811 1721 aa12.08□□□□□ -0.48
SEMA4D-208ENST00000422704 UQCRFS1P1P0C7P4 283 aa12.08□□□□□ -0.48
SEMA4D-208ENST00000422704 TNNI2P48788 182 aa12.08□□□□□ -0.48
SEMA4D-208ENST00000422704 MAP9Q49MG5 647 aa12.08□□□□□ -0.48
SEMA4D-208ENST00000422704 EXOC1Q9NV70 894 aa12.08□□□□□ -0.48
SEMA4D-208ENST00000422704 CAVIN2O95810 425 aa12.07□□□□□ -0.48
SEMA4D-208ENST00000422704 NAPAP54920 295 aa12.07□□□□□ -0.48
SEMA4D-208ENST00000422704 MAP2K1Q02750 393 aaPredicted RBP12.07□□□□□ -0.48
SEMA4D-208ENST00000422704 USP44Q9H0E7 712 aa12.07□□□□□ -0.48
SEMA4D-208ENST00000422704 VPS16Q9H269 839 aa12.07□□□□□ -0.48
SEMA4D-208ENST00000422704 RSPH14Q9UHP6 348 aa12.07□□□□□ -0.48
SEMA4D-208ENST00000422704 CEP170BQ9Y4F5 1589 aaPredicted RBP12.07□□□□□ -0.48
SEMA4D-208ENST00000422704 COL3A1P02461 1466 aaPredicted RBP12.07□□□□□ -0.48
SEMA4D-208ENST00000422704 ZNF569Q5MCW4 686 aa12.07□□□□□ -0.48
SEMA4D-208ENST00000422704 AKAP12Q02952 1782 aa12.07□□□□□ -0.48
SEMA4D-208ENST00000422704 RIMBP2O15034 1052 aa12.07□□□□□ -0.48
SEMA4D-208ENST00000422704 UNC5CLQ8IV45 518 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms