RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 MIGA1Q8NAN2 632 aa15.22■□□□□ 0.03
COL20A1-203ENST00000422202 ZNF526Q8TF50 670 aaPredicted RBP15.22■□□□□ 0.03
COL20A1-203ENST00000422202 SSH1Q8WYL5 1049 aa15.22■□□□□ 0.03
COL20A1-203ENST00000422202 NKTRP30414 1462 aaKnown RBP15.22■□□□□ 0.03
COL20A1-203ENST00000422202 PI4KAP2A4QPH2 592 aa15.22■□□□□ 0.03
COL20A1-203ENST00000422202 MYCLP12524 364 aaPredicted RBP15.22■□□□□ 0.03
COL20A1-203ENST00000422202 ALDH1L2Q3SY69 923 aa15.22■□□□□ 0.03
COL20A1-203ENST00000422202 PI4KAP1Q8N8J0 262 aa15.22■□□□□ 0.03
COL20A1-203ENST00000422202 PHF8Q9UPP1 1060 aa15.22■□□□□ 0.03
COL20A1-203ENST00000422202 VIMP08670 466 aaKnown RBP15.22■□□□□ 0.03
COL20A1-203ENST00000422202 SH2D4BQ5SQS7 431 aa15.22■□□□□ 0.03
COL20A1-203ENST00000422202 ANKRD24Q8TF21 1146 aa15.22■□□□□ 0.03
COL20A1-203ENST00000422202 PTPDC1A2A3K4 754 aa15.21■□□□□ 0.03
COL20A1-203ENST00000422202 CCNT1O60563 726 aaKnown RBP15.21■□□□□ 0.03
COL20A1-203ENST00000422202 WDR66Q8TBY9 1149 aa15.21■□□□□ 0.03
COL20A1-203ENST00000422202 SWAP70Q9UH65 585 aa15.21■□□□□ 0.03
COL20A1-203ENST00000422202 DNAI1Q9UI46 699 aa15.21■□□□□ 0.03
COL20A1-203ENST00000422202 DDX39AO00148 427 aaKnown RBP15.21■□□□□ 0.03
COL20A1-203ENST00000422202 ATP11AP98196 1134 aa15.21■□□□□ 0.03
COL20A1-203ENST00000422202 ANKRD13DQ6ZTN6 518 aa15.21■□□□□ 0.03
COL20A1-203ENST00000422202 ZYXQ15942 572 aaKnown RBP15.21■□□□□ 0.03
COL20A1-203ENST00000422202 CSRNP2Q9H175 543 aa15.21■□□□□ 0.03
COL20A1-203ENST00000422202 GPCPD1Q9NPB8 672 aa15.21■□□□□ 0.03
COL20A1-203ENST00000422202 AMOTL2Q9Y2J4 779 aa15.21■□□□□ 0.03
COL20A1-203ENST00000422202 MSH6P52701 1360 aa15.21■□□□□ 0.03
COL20A1-203ENST00000422202 PDE1CQ14123 709 aaPredicted RBP15.21■□□□□ 0.03
COL20A1-203ENST00000422202 CALML3P27482 149 aa15.21■□□□□ 0.03
COL20A1-203ENST00000422202 SRGAP1Q7Z6B7 1085 aa15.21■□□□□ 0.03
COL20A1-203ENST00000422202 LDHBP07195 334 aaKnown RBP15.21■□□□□ 0.02
COL20A1-203ENST00000422202 SYT1P21579 422 aa15.21■□□□□ 0.02
COL20A1-203ENST00000422202 AOPEPQ8N6M6 819 aa15.21■□□□□ 0.02
COL20A1-203ENST00000422202 ZNF830Q96NB3 372 aaPredicted RBP15.21■□□□□ 0.02
COL20A1-203ENST00000422202 CD2APQ9Y5K6 639 aa15.21■□□□□ 0.02
COL20A1-203ENST00000422202 CFTRP13569 1480 aa15.21■□□□□ 0.02
COL20A1-203ENST00000422202 RTL9Q8NET4 1388 aa15.2■□□□□ 0.02
COL20A1-203ENST00000422202 PRKG1Q13976 671 aa15.2■□□□□ 0.02
COL20A1-203ENST00000422202 SPOPO43791 374 aa15.2■□□□□ 0.02
COL20A1-203ENST00000422202 SLC9C2Q5TAH2 1124 aa15.2■□□□□ 0.02
COL20A1-203ENST00000422202 HFM1A2PYH4 1435 aa15.2■□□□□ 0.02
COL20A1-203ENST00000422202 PLCG2P16885 1265 aa15.2■□□□□ 0.02
COL20A1-203ENST00000422202 CALCOCO2Q13137 446 aa15.2■□□□□ 0.02
COL20A1-203ENST00000422202 NCAPGQ9BPX3 1015 aa15.2■□□□□ 0.02
COL20A1-203ENST00000422202 CSPG5O95196 566 aa15.19■□□□□ 0.02
COL20A1-203ENST00000422202 ATP5DP30049 168 aa15.19■□□□□ 0.02
COL20A1-203ENST00000422202 KARSQ15046 597 aaKnown RBP15.19■□□□□ 0.02
COL20A1-203ENST00000422202 ZCRB1Q8TBF4 217 aaKnown RBP15.19■□□□□ 0.02
COL20A1-203ENST00000422202 TNPO1Q92973 898 aaKnown RBP15.19■□□□□ 0.02
COL20A1-203ENST00000422202 IRAK4Q9NWZ3 460 aa15.19■□□□□ 0.02
COL20A1-203ENST00000422202 STX17P56962 302 aa15.19■□□□□ 0.02
COL20A1-203ENST00000422202 VPS18Q9P253 973 aa15.19■□□□□ 0.02
COL20A1-203ENST00000422202 UTP11Q9Y3A2 253 aaKnown RBP15.19■□□□□ 0.02
COL20A1-203ENST00000422202 IVLP07476 585 aa15.19■□□□□ 0.02
COL20A1-203ENST00000422202 KRT19P08727 400 aa15.19■□□□□ 0.02
COL20A1-203ENST00000422202 MCMDC2Q4G0Z9 681 aa15.19■□□□□ 0.02
COL20A1-203ENST00000422202 FYB2Q5VWT5 728 aa15.19■□□□□ 0.02
COL20A1-203ENST00000422202 ZHX1Q9UKY1 873 aaPredicted RBP15.19■□□□□ 0.02
COL20A1-203ENST00000422202 CASQ2O14958 399 aaPredicted RBP15.19■□□□□ 0.02
COL20A1-203ENST00000422202 PARP1P09874 1014 aaKnown RBP15.19■□□□□ 0.02
COL20A1-203ENST00000422202 MAN1A1P33908 653 aa15.19■□□□□ 0.02
COL20A1-203ENST00000422202 CEBPAP49715 358 aaPredicted RBP15.19■□□□□ 0.02
COL20A1-203ENST00000422202 GNA11P29992 359 aa15.19■□□□□ 0.02
COL20A1-203ENST00000422202 CARD10Q9BWT7 1032 aa15.19■□□□□ 0.02
COL20A1-203ENST00000422202 LZTFL1Q9NQ48 299 aa15.19■□□□□ 0.02
COL20A1-203ENST00000422202 NKIRAS1Q9NYS0 192 aa15.19■□□□□ 0.02
COL20A1-203ENST00000422202 STK32BQ9NY57 414 aa15.18■□□□□ 0.02
COL20A1-203ENST00000422202 PIK3R4Q99570 1358 aa15.18■□□□□ 0.02
COL20A1-203ENST00000422202 RNASE9P60153 205 aaKnown RBP15.18■□□□□ 0.02
COL20A1-203ENST00000422202 OATP04181 439 aa15.18■□□□□ 0.02
COL20A1-203ENST00000422202 RHOXF2BP0C7M4 288 aa15.18■□□□□ 0.02
COL20A1-203ENST00000422202 ZNF131P52739 623 aa15.18■□□□□ 0.02
COL20A1-203ENST00000422202 RHOXF2Q9BQY4 288 aa15.18■□□□□ 0.02
COL20A1-203ENST00000422202 ARHGEF10LQ9HCE6 1279 aa15.18■□□□□ 0.02
COL20A1-203ENST00000422202 CHPF2Q9P2E5 772 aa15.18■□□□□ 0.02
COL20A1-203ENST00000422202 RTL1A6NKG5 1358 aa15.18■□□□□ 0.02
COL20A1-203ENST00000422202 RAB3IPQ96QF0 476 aaPredicted RBP15.18■□□□□ 0.02
COL20A1-203ENST00000422202 MED10Q9BTT4 135 aa15.18■□□□□ 0.02
COL20A1-203ENST00000422202 KIAA1107Q9UPP5 1409 aa15.18■□□□□ 0.02
COL20A1-203ENST00000422202 ANXA1P04083 346 aa15.18■□□□□ 0.02
COL20A1-203ENST00000422202 TBC1D9Q6ZT07 1266 aa15.18■□□□□ 0.02
COL20A1-203ENST00000422202 FCHSD1Q86WN1 690 aa15.18■□□□□ 0.02
COL20A1-203ENST00000422202 CCDC26Q8TAB7 109 aa15.18■□□□□ 0.02
COL20A1-203ENST00000422202 CNPY2Q9Y2B0 182 aa15.18■□□□□ 0.02
COL20A1-203ENST00000422202 SKA2Q8WVK7 121 aaPredicted RBP15.18■□□□□ 0.02
COL20A1-203ENST00000422202 RFC1P35251 1148 aaPredicted RBP15.18■□□□□ 0.02
COL20A1-203ENST00000422202 SLFN5Q08AF3 891 aa15.18■□□□□ 0.02
COL20A1-203ENST00000422202 RBM17Q96I25 401 aaKnown RBP15.18■□□□□ 0.02
COL20A1-203ENST00000422202 USTQ9Y2C2 406 aa15.18■□□□□ 0.02
COL20A1-203ENST00000422202 CNGA1P29973 690 aa15.17■□□□□ 0.02
COL20A1-203ENST00000422202 NEDD9Q14511 834 aa15.17■□□□□ 0.02
COL20A1-203ENST00000422202 ZNF569Q5MCW4 686 aa15.17■□□□□ 0.02
COL20A1-203ENST00000422202 WHAMMQ8TF30 809 aa15.17■□□□□ 0.02
COL20A1-203ENST00000422202 ARHGEF2Q92974 986 aaKnown RBP15.17■□□□□ 0.02
COL20A1-203ENST00000422202 SEPT10Q9P0V9 454 aa15.17■□□□□ 0.02
COL20A1-203ENST00000422202 EIF6P56537 245 aaKnown RBP15.17■□□□□ 0.02
COL20A1-203ENST00000422202 LACTBP83111 547 aaPredicted RBP15.17■□□□□ 0.02
COL20A1-203ENST00000422202 MUM1L1Q5H9M0 696 aa15.17■□□□□ 0.02
COL20A1-203ENST00000422202 VCX3BQ9H321 246 aa15.17■□□□□ 0.02
COL20A1-203ENST00000422202 LMTK3Q96Q04 1460 aa15.17■□□□□ 0.02
COL20A1-203ENST00000422202 RPL13P26373 211 aaKnown RBP15.17■□□□□ 0.02
COL20A1-203ENST00000422202 ZKSCAN3Q9BRR0 538 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms