RNA–Protein interactions for RNA: ENST00000422121.2

NF1-203, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-203ENST00000422121 MFSD14BQ5SR56 506 aa12.3□□□□□ -0.44
NF1-203ENST00000422121 CEP85Q6P2H3 762 aa12.3□□□□□ -0.44
NF1-203ENST00000422121 SIRT2Q8IXJ6 389 aa12.3□□□□□ -0.44
NF1-203ENST00000422121 HS6ST3Q8IZP7 471 aa12.3□□□□□ -0.44
NF1-203ENST00000422121 OGFOD1Q8N543 542 aa12.3□□□□□ -0.44
NF1-203ENST00000422121 MTMR14Q8NCE2 650 aa12.3□□□□□ -0.44
NF1-203ENST00000422121 DCPSQ96C86 337 aaKnown RBP12.3□□□□□ -0.44
NF1-203ENST00000422121 NOP58Q9Y2X3 529 aaKnown RBP12.3□□□□□ -0.44
NF1-203ENST00000422121 SLC5A1P13866 664 aa12.29□□□□□ -0.44
NF1-203ENST00000422121 MMP14P50281 582 aa12.29□□□□□ -0.44
NF1-203ENST00000422121 CAVIN4Q5BKX8 364 aa12.29□□□□□ -0.44
NF1-203ENST00000422121 PRAMEF18Q5VWM3 479 aa12.29□□□□□ -0.44
NF1-203ENST00000422121 SAPCD2Q86UD0 394 aa12.29□□□□□ -0.44
NF1-203ENST00000422121 YTHDC1Q96MU7 727 aaKnown RBP12.29□□□□□ -0.44
NF1-203ENST00000422121 TRPM7Q96QT4 1865 aa12.28□□□□□ -0.44
NF1-203ENST00000422121 A0A1B0GUL7 405 aa12.28□□□□□ -0.44
NF1-203ENST00000422121 CHAF1AQ13111 956 aaPredicted RBP12.28□□□□□ -0.44
NF1-203ENST00000422121 CFAP100Q494V2 611 aa12.28□□□□□ -0.44
NF1-203ENST00000422121 CCDC102BQ68D86 513 aa12.28□□□□□ -0.44
NF1-203ENST00000422121 LHX8Q68G74 356 aa12.28□□□□□ -0.44
NF1-203ENST00000422121 CDCA5Q96FF9 252 aa12.28□□□□□ -0.44
NF1-203ENST00000422121 XAGE2Q96GT9 111 aa12.28□□□□□ -0.44
NF1-203ENST00000422121 TLL2Q9Y6L7 1015 aa12.28□□□□□ -0.44
NF1-203ENST00000422121 PITPNM2Q9BZ72 1349 aa12.28□□□□□ -0.44
NF1-203ENST00000422121 PDE3AQ14432 1141 aa12.27□□□□□ -0.45
NF1-203ENST00000422121 DEFB115Q30KQ5 88 aa12.27□□□□□ -0.45
NF1-203ENST00000422121 VPS37DQ86XT2 251 aa12.27□□□□□ -0.45
NF1-203ENST00000422121 ZNF579Q8NAF0 562 aaKnown RBP12.27□□□□□ -0.45
NF1-203ENST00000422121 TTF2Q9UNY4 1162 aaKnown RBP12.27□□□□□ -0.45
NF1-203ENST00000422121 SURF6O75683 361 aaKnown RBP12.26□□□□□ -0.45
NF1-203ENST00000422121 MS4A1P11836 297 aa12.26□□□□□ -0.45
NF1-203ENST00000422121 G3BP1Q13283 466 aaKnown RBP eCLIP12.26□□□□□ -0.45
NF1-203ENST00000422121 DLGAP5Q15398 846 aa12.26□□□□□ -0.45
NF1-203ENST00000422121 SULF1Q8IWU6 871 aa12.26□□□□□ -0.45
NF1-203ENST00000422121 MRIQ9BWK5 157 aa12.26□□□□□ -0.45
NF1-203ENST00000422121 ZNF408Q9H9D4 720 aa12.26□□□□□ -0.45
NF1-203ENST00000422121 SERPINA10Q9UK55 444 aa12.26□□□□□ -0.45
NF1-203ENST00000422121 HDAC9Q9UKV0 1011 aa12.26□□□□□ -0.45
NF1-203ENST00000422121 ABT1Q9ULW3 272 aaKnown RBP12.26□□□□□ -0.45
NF1-203ENST00000422121 CRKP46108 304 aa12.25□□□□□ -0.45
NF1-203ENST00000422121 RASGRF1Q13972 1273 aa12.25□□□□□ -0.45
NF1-203ENST00000422121 CYP4F22Q6NT55 531 aa12.25□□□□□ -0.45
NF1-203ENST00000422121 APOBEC3HQ6NTF7 200 aaKnown RBP12.25□□□□□ -0.45
NF1-203ENST00000422121 MOB2Q70IA6 237 aa12.25□□□□□ -0.45
NF1-203ENST00000422121 SPRYD3Q8NCJ5 442 aa12.25□□□□□ -0.45
NF1-203ENST00000422121 TBC1D22AQ8WUA7 517 aa12.25□□□□□ -0.45
NF1-203ENST00000422121 ZIC5Q96T25 663 aa12.25□□□□□ -0.45
NF1-203ENST00000422121 TAOK2Q9UL54 1235 aa12.25□□□□□ -0.45
NF1-203ENST00000422121 DDX19BQ9UMR2 479 aa12.25□□□□□ -0.45
NF1-203ENST00000422121 ARAP2Q8WZ64 1704 aa12.25□□□□□ -0.45
NF1-203ENST00000422121 CLRN2A0PK11 232 aa12.24□□□□□ -0.45
NF1-203ENST00000422121 FRAT2O75474 233 aaPredicted RBP12.24□□□□□ -0.45
NF1-203ENST00000422121 PYGBP11216 843 aa12.24□□□□□ -0.45
NF1-203ENST00000422121 PRDX5P30044 214 aa12.24□□□□□ -0.45
NF1-203ENST00000422121 HDLBPQ00341 1268 aaKnown RBP12.24□□□□□ -0.45
NF1-203ENST00000422121 TNNI3KQ59H18 835 aa12.24□□□□□ -0.45
NF1-203ENST00000422121 ZNF384Q8TF68 577 aa12.24□□□□□ -0.45
NF1-203ENST00000422121 EAF2Q96CJ1 260 aaPredicted RBP12.24□□□□□ -0.45
NF1-203ENST00000422121 NEUROD6Q96NK8 337 aa12.24□□□□□ -0.45
NF1-203ENST00000422121 WDR33Q9C0J8 1336 aaKnown RBP12.24□□□□□ -0.45
NF1-203ENST00000422121 DEFB129Q9H1M3 183 aa12.24□□□□□ -0.45
NF1-203ENST00000422121 TDRD3Q9H7E2 651 aaKnown RBP12.24□□□□□ -0.45
NF1-203ENST00000422121 GBA2Q9HCG7 927 aaPredicted RBP12.24□□□□□ -0.45
NF1-203ENST00000422121 GPR108Q9NPR9 543 aa12.24□□□□□ -0.45
NF1-203ENST00000422121 AKAP2Q9Y2D5 859 aa12.24□□□□□ -0.45
NF1-203ENST00000422121 FPGT-TNNI3KV9GXZ4 949 aa12.24□□□□□ -0.45
NF1-203ENST00000422121 SALL1Q9NSC2 1324 aa12.23□□□□□ -0.45
NF1-203ENST00000422121 FAM155AB1AL88 458 aaPredicted RBP12.23□□□□□ -0.45
NF1-203ENST00000422121 SEMA3EO15041 775 aa12.23□□□□□ -0.45
NF1-203ENST00000422121 DIXDC1Q155Q3 683 aa12.23□□□□□ -0.45
NF1-203ENST00000422121 PI16Q6UXB8 463 aa12.23□□□□□ -0.45
NF1-203ENST00000422121 CDAN1Q8IWY9 1227 aa12.23□□□□□ -0.45
NF1-203ENST00000422121 RPAP2Q8IXW5 612 aaPredicted RBP12.23□□□□□ -0.45
NF1-203ENST00000422121 WDR66Q8TBY9 1149 aa12.23□□□□□ -0.45
NF1-203ENST00000422121 HHIPL1Q96JK4 782 aa12.23□□□□□ -0.45
NF1-203ENST00000422121 CAPNS2Q96L46 248 aa12.23□□□□□ -0.45
NF1-203ENST00000422121 ZDHHC15Q96MV8 337 aa12.23□□□□□ -0.45
NF1-203ENST00000422121 DBNDD2Q9BQY9 259 aa12.23□□□□□ -0.45
NF1-203ENST00000422121 TLR7Q9NYK1 1049 aaKnown RBP12.23□□□□□ -0.45
NF1-203ENST00000422121 HMG20BQ9P0W2 317 aa12.23□□□□□ -0.45
NF1-203ENST00000422121 ZNF70Q9UC06 446 aaPredicted RBP12.23□□□□□ -0.45
NF1-203ENST00000422121 DENND2AQ9ULE3 1009 aa12.23□□□□□ -0.45
NF1-203ENST00000422121 FZD1Q9UP38 647 aa12.23□□□□□ -0.45
NF1-203ENST00000422121 EXOC6BQ9Y2D4 811 aa12.23□□□□□ -0.45
NF1-203ENST00000422121 SUGT1Q9Y2Z0 365 aa12.23□□□□□ -0.45
NF1-203ENST00000422121 SSC5DA1L4H1 1573 aa12.22□□□□□ -0.45
NF1-203ENST00000422121 GALR2O43603 387 aaPredicted RBP12.22□□□□□ -0.45
NF1-203ENST00000422121 AOC2O75106 756 aa12.22□□□□□ -0.45
NF1-203ENST00000422121 ARID4AP29374 1257 aaPredicted RBP12.22□□□□□ -0.45
NF1-203ENST00000422121 MCAMP43121 646 aa12.22□□□□□ -0.45
NF1-203ENST00000422121 RBM5P52756 815 aaKnown RBP eCLIP12.22□□□□□ -0.45
NF1-203ENST00000422121 HUNKP57058 714 aa12.22□□□□□ -0.45
NF1-203ENST00000422121 HHIPL2Q6UWX4 724 aa12.22□□□□□ -0.45
NF1-203ENST00000422121 TEPSINQ96N21 525 aa12.22□□□□□ -0.45
NF1-203ENST00000422121 GNL3LQ9NVN8 582 aaKnown RBP12.22□□□□□ -0.45
NF1-203ENST00000422121 DBNLQ9UJU6 430 aaKnown RBP12.22□□□□□ -0.45
NF1-203ENST00000422121 PDS5AQ29RF7 1337 aaKnown RBP12.21□□□□□ -0.45
NF1-203ENST00000422121 UBE2Q2LH0YL09 131 aa12.21□□□□□ -0.45
NF1-203ENST00000422121 CACNB3P54284 484 aa12.21□□□□□ -0.45
NF1-203ENST00000422121 RRP1P56182 461 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms