RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 TNFAIP1Q13829 316 aa23.69■■□□□ 1.38
VARS2-202ENST00000421263 ZNF296Q8WUU4 475 aaPredicted RBP23.69■■□□□ 1.38
VARS2-202ENST00000421263 CLMNQ96JQ2 1002 aa23.69■■□□□ 1.38
VARS2-202ENST00000421263 NOB1Q9ULX3 412 aaKnown RBP23.69■■□□□ 1.38
VARS2-202ENST00000421263 MANSC4A6NHS7 340 aaPredicted RBP23.68■■□□□ 1.38
VARS2-202ENST00000421263 GPR25O00155 361 aa23.68■■□□□ 1.38
VARS2-202ENST00000421263 PUM3Q15397 648 aaKnown RBP23.68■■□□□ 1.38
VARS2-202ENST00000421263 WNK4Q96J92 1243 aa23.68■■□□□ 1.38
VARS2-202ENST00000421263 TEPSINQ96N21 525 aa23.68■■□□□ 1.38
VARS2-202ENST00000421263 IFIT1P09914 478 aaKnown RBP23.67■■□□□ 1.38
VARS2-202ENST00000421263 IREB2P48200 963 aaKnown RBP23.67■■□□□ 1.38
VARS2-202ENST00000421263 MLLT1Q03111 559 aaPredicted RBP23.67■■□□□ 1.38
VARS2-202ENST00000421263 ATG9AQ7Z3C6 839 aa23.67■■□□□ 1.38
VARS2-202ENST00000421263 FBXO3Q9UK99 471 aa23.67■■□□□ 1.38
VARS2-202ENST00000421263 FRAT2O75474 233 aaPredicted RBP23.66■■□□□ 1.38
VARS2-202ENST00000421263 ALDH1A1P00352 501 aa23.66■■□□□ 1.38
VARS2-202ENST00000421263 CHAF1AQ13111 956 aaPredicted RBP23.66■■□□□ 1.38
VARS2-202ENST00000421263 R3HDMLQ9H3Y0 253 aa23.66■■□□□ 1.38
VARS2-202ENST00000421263 SUGT1Q9Y2Z0 365 aa23.66■■□□□ 1.38
VARS2-202ENST00000421263 LAMB1P07942 1786 aa23.65■■□□□ 1.38
VARS2-202ENST00000421263 PKN2Q16513 984 aaKnown RBP23.65■■□□□ 1.38
VARS2-202ENST00000421263 ANKRD13AQ8IZ07 590 aa23.65■■□□□ 1.38
VARS2-202ENST00000421263 LPIN2Q92539 896 aa23.65■■□□□ 1.38
VARS2-202ENST00000421263 API5Q9BZZ5 524 aaKnown RBP23.65■■□□□ 1.38
VARS2-202ENST00000421263 UBTFL1P0CB47 393 aaPredicted RBP23.64■■□□□ 1.37
VARS2-202ENST00000421263 IFNL1Q8IU54 200 aa23.64■■□□□ 1.37
VARS2-202ENST00000421263 TCP10L2B9ZVM9 353 aa23.63■■□□□ 1.37
VARS2-202ENST00000421263 CIAO1O76071 339 aa23.63■■□□□ 1.37
VARS2-202ENST00000421263 GJA5P36382 358 aa23.63■■□□□ 1.37
VARS2-202ENST00000421263 RARSP54136 660 aaKnown RBP23.63■■□□□ 1.37
VARS2-202ENST00000421263 CDAN1Q8IWY9 1227 aa23.63■■□□□ 1.37
VARS2-202ENST00000421263 TEKT1Q969V4 418 aa23.63■■□□□ 1.37
VARS2-202ENST00000421263 ZDHHC15Q96MV8 337 aa23.63■■□□□ 1.37
VARS2-202ENST00000421263 SLC5A1P13866 664 aa23.62■■□□□ 1.37
VARS2-202ENST00000421263 TNNI2P48788 182 aa23.62■■□□□ 1.37
VARS2-202ENST00000421263 ARHGAP45Q92619 1136 aa23.62■■□□□ 1.37
VARS2-202ENST00000421263 TMEM39BQ9GZU3 492 aa23.62■■□□□ 1.37
VARS2-202ENST00000421263 TESPA1A2RU30 521 aaPredicted RBP23.61■■□□□ 1.37
VARS2-202ENST00000421263 IGF2BP3O00425 579 aaKnown RBP eCLIP23.61■■□□□ 1.37
VARS2-202ENST00000421263 FKTNO75072 461 aa23.61■■□□□ 1.37
VARS2-202ENST00000421263 APOBEC3HQ6NTF7 200 aaKnown RBP23.61■■□□□ 1.37
VARS2-202ENST00000421263 HHIPL2Q6UWX4 724 aa23.61■■□□□ 1.37
VARS2-202ENST00000421263 HDAC5Q9UQL6 1122 aa23.61■■□□□ 1.37
VARS2-202ENST00000421263 FKBP1CQ5VVH2 108 aa23.6■■□□□ 1.37
VARS2-202ENST00000421263 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.6■■□□□ 1.37
VARS2-202ENST00000421263 WDR66Q8TBY9 1149 aa23.6■■□□□ 1.37
VARS2-202ENST00000421263 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.6■■□□□ 1.37
VARS2-202ENST00000421263 HPS5Q9UPZ3 1129 aa23.6■■□□□ 1.37
VARS2-202ENST00000421263 MAST3O60307 1309 aa23.59■■□□□ 1.37
VARS2-202ENST00000421263 ZBTB22O15209 634 aa23.59■■□□□ 1.37
VARS2-202ENST00000421263 INTS3Q68E01 1043 aaKnown RBP23.59■■□□□ 1.37
VARS2-202ENST00000421263 FAM83AQ86UY5 434 aa23.59■■□□□ 1.37
VARS2-202ENST00000421263 CEP126Q9P2H0 1117 aa23.59■■□□□ 1.37
VARS2-202ENST00000421263 LRRFIP2Q9Y608 721 aaKnown RBP23.59■■□□□ 1.37
VARS2-202ENST00000421263 MAP3K9P80192 1104 aa23.58■■□□□ 1.37
VARS2-202ENST00000421263 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.58■■□□□ 1.37
VARS2-202ENST00000421263 PTPN18Q99952 460 aa23.58■■□□□ 1.37
VARS2-202ENST00000421263 SIL1Q9H173 461 aa23.58■■□□□ 1.37
VARS2-202ENST00000421263 COPRSQ9NQ92 184 aa23.58■■□□□ 1.37
VARS2-202ENST00000421263 IL15P40933 162 aaPredicted RBP23.57■■□□□ 1.36
VARS2-202ENST00000421263 CACNB3P54284 484 aa23.57■■□□□ 1.36
VARS2-202ENST00000421263 OPTNQ96CV9 577 aa23.57■■□□□ 1.36
VARS2-202ENST00000421263 MS4A4AQ96JQ5 239 aa23.57■■□□□ 1.36
VARS2-202ENST00000421263 MEIS3Q99687 375 aa23.57■■□□□ 1.36
VARS2-202ENST00000421263 ELP3Q9H9T3 547 aa23.57■■□□□ 1.36
VARS2-202ENST00000421263 OTOFQ9HC10 1997 aa23.57■■□□□ 1.36
VARS2-202ENST00000421263 ATP2B3Q16720 1220 aa23.56■■□□□ 1.36
VARS2-202ENST00000421263 OTUD7BQ6GQQ9 843 aa23.56■■□□□ 1.36
VARS2-202ENST00000421263 FBXO46Q6PJ61 603 aaPredicted RBP23.56■■□□□ 1.36
VARS2-202ENST00000421263 VGLL4Q14135 290 aa23.55■■□□□ 1.36
VARS2-202ENST00000421263 TMOD2Q9NZR1 351 aa23.55■■□□□ 1.36
VARS2-202ENST00000421263 PA2G4Q9UQ80 394 aaKnown RBP23.55■■□□□ 1.36
VARS2-202ENST00000421263 TNRC18O15417 2968 aaPredicted RBP23.54■■□□□ 1.36
VARS2-202ENST00000421263 SOX10P56693 466 aa23.54■■□□□ 1.36
VARS2-202ENST00000421263 MTX1Q13505 466 aa23.53■■□□□ 1.36
VARS2-202ENST00000421263 CNKSR2Q8WXI2 1034 aa23.53■■□□□ 1.36
VARS2-202ENST00000421263 GNL3LQ9NVN8 582 aaKnown RBP23.53■■□□□ 1.36
VARS2-202ENST00000421263 SALL1Q9NSC2 1324 aa23.53■■□□□ 1.36
VARS2-202ENST00000421263 MYH13Q9UKX3 1938 aa23.53■■□□□ 1.36
VARS2-202ENST00000421263 SEMA3EO15041 775 aa23.52■■□□□ 1.36
VARS2-202ENST00000421263 GNAI3P08754 354 aa23.52■■□□□ 1.36
VARS2-202ENST00000421263 PRDX5P30044 214 aa23.52■■□□□ 1.36
VARS2-202ENST00000421263 CRHR2Q13324 411 aa23.52■■□□□ 1.36
VARS2-202ENST00000421263 HOOK2Q96ED9 719 aa23.52■■□□□ 1.36
VARS2-202ENST00000421263 DAGLAQ9Y4D2 1042 aa23.52■■□□□ 1.36
VARS2-202ENST00000421263 CSADQ9Y600 493 aa23.52■■□□□ 1.36
VARS2-202ENST00000421263 RPAP1Q9BWH6 1393 aaPredicted RBP23.52■■□□□ 1.36
VARS2-202ENST00000421263 PHKA1P46020 1223 aa23.51■■□□□ 1.35
VARS2-202ENST00000421263 GTF2A2P52657 109 aa23.51■■□□□ 1.35
VARS2-202ENST00000421263 FAM151AQ8WW52 585 aa23.51■■□□□ 1.35
VARS2-202ENST00000421263 DENND2AQ9ULE3 1009 aa23.51■■□□□ 1.35
VARS2-202ENST00000421263 SPDYE5A6NIY4 337 aa23.5■■□□□ 1.35
VARS2-202ENST00000421263 CDC42EP5Q6NZY7 148 aa23.5■■□□□ 1.35
VARS2-202ENST00000421263 BRI3BPQ8WY22 251 aa23.5■■□□□ 1.35
VARS2-202ENST00000421263 SNCAIPQ9Y6H5 919 aa23.5■■□□□ 1.35
VARS2-202ENST00000421263 IPO8O15397 1037 aaKnown RBP23.49■■□□□ 1.35
VARS2-202ENST00000421263 LDHBP07195 334 aaKnown RBP23.49■■□□□ 1.35
VARS2-202ENST00000421263 TIMM10P62072 90 aa23.49■■□□□ 1.35
VARS2-202ENST00000421263 DIXDC1Q155Q3 683 aa23.49■■□□□ 1.35
VARS2-202ENST00000421263 CCDC102BQ68D86 513 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms