RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 FGFR2P21802 821 aa26.58■■□□□ 1.85
PTPN4-202ENST00000420482 BCAMP50895 628 aa26.58■■□□□ 1.85
PTPN4-202ENST00000420482 RASA3Q14644 834 aa26.58■■□□□ 1.85
PTPN4-202ENST00000420482 TEKT1Q969V4 418 aa26.58■■□□□ 1.85
PTPN4-202ENST00000420482 CEP126Q9P2H0 1117 aa26.58■■□□□ 1.85
PTPN4-202ENST00000420482 ZNF70Q9UC06 446 aaPredicted RBP26.58■■□□□ 1.85
PTPN4-202ENST00000420482 GNAI3P08754 354 aa26.57■■□□□ 1.84
PTPN4-202ENST00000420482 TM4SF4P48230 202 aa26.57■■□□□ 1.84
PTPN4-202ENST00000420482 TDRD3Q9H7E2 651 aaKnown RBP26.57■■□□□ 1.84
PTPN4-202ENST00000420482 GNL3LQ9NVN8 582 aaKnown RBP26.57■■□□□ 1.84
PTPN4-202ENST00000420482 LRRFIP2Q9Y608 721 aaKnown RBP26.57■■□□□ 1.84
PTPN4-202ENST00000420482 PDE4DIPQ5VU43 2346 aa26.56■■□□□ 1.84
PTPN4-202ENST00000420482 TNRC18O15417 2968 aaPredicted RBP26.56■■□□□ 1.84
PTPN4-202ENST00000420482 SIL1Q9H173 461 aa26.56■■□□□ 1.84
PTPN4-202ENST00000420482 TMOD2Q9NZR1 351 aa26.56■■□□□ 1.84
PTPN4-202ENST00000420482 LAMB1P07942 1786 aa26.56■■□□□ 1.84
PTPN4-202ENST00000420482 IL15P40933 162 aaPredicted RBP26.55■■□□□ 1.84
PTPN4-202ENST00000420482 INHBEP58166 350 aa26.55■■□□□ 1.84
PTPN4-202ENST00000420482 MKRN3Q13064 507 aaKnown RBP26.55■■□□□ 1.84
PTPN4-202ENST00000420482 SPRYD7Q5W111 196 aa26.55■■□□□ 1.84
PTPN4-202ENST00000420482 INTS3Q68E01 1043 aaKnown RBP26.55■■□□□ 1.84
PTPN4-202ENST00000420482 WDR66Q8TBY9 1149 aa26.55■■□□□ 1.84
PTPN4-202ENST00000420482 MRIQ9BWK5 157 aa26.55■■□□□ 1.84
PTPN4-202ENST00000420482 ZBTB48P10074 688 aaPredicted RBP26.54■■□□□ 1.84
PTPN4-202ENST00000420482 ATP2B3Q16720 1220 aa26.54■■□□□ 1.84
PTPN4-202ENST00000420482 NBPF12Q5TAG4 269 aaPredicted RBP26.54■■□□□ 1.84
PTPN4-202ENST00000420482 ATG9AQ7Z3C6 839 aa26.54■■□□□ 1.84
PTPN4-202ENST00000420482 MANSC4A6NHS7 340 aaPredicted RBP26.53■■□□□ 1.84
PTPN4-202ENST00000420482 ALDH1A1P00352 501 aa26.53■■□□□ 1.84
PTPN4-202ENST00000420482 ANKRD13AQ8IZ07 590 aa26.53■■□□□ 1.84
PTPN4-202ENST00000420482 SSC5DA1L4H1 1573 aa26.52■■□□□ 1.84
PTPN4-202ENST00000420482 CTU1Q7Z7A3 348 aaKnown RBP26.52■■□□□ 1.84
PTPN4-202ENST00000420482 MEIS3Q99687 375 aa26.52■■□□□ 1.84
PTPN4-202ENST00000420482 AOX1Q06278 1338 aa26.51■■□□□ 1.83
PTPN4-202ENST00000420482 TCP10L2B9ZVM9 353 aa26.51■■□□□ 1.83
PTPN4-202ENST00000420482 FRAT1Q92837 279 aaPredicted RBP26.51■■□□□ 1.83
PTPN4-202ENST00000420482 ZDHHC15Q96MV8 337 aa26.51■■□□□ 1.83
PTPN4-202ENST00000420482 COPRSQ9NQ92 184 aa26.51■■□□□ 1.83
PTPN4-202ENST00000420482 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.51■■□□□ 1.83
PTPN4-202ENST00000420482 FZD1Q9UP38 647 aa26.51■■□□□ 1.83
PTPN4-202ENST00000420482 DIEXFQ68CQ4 756 aaKnown RBP26.5■■□□□ 1.83
PTPN4-202ENST00000420482 ATF7IPQ6VMQ6 1270 aa26.5■■□□□ 1.83
PTPN4-202ENST00000420482 HOOK2Q96ED9 719 aa26.5■■□□□ 1.83
PTPN4-202ENST00000420482 SEMA3EO15041 775 aa26.49■■□□□ 1.83
PTPN4-202ENST00000420482 USP2O75604 605 aaPredicted RBP26.49■■□□□ 1.83
PTPN4-202ENST00000420482 SLC34A2O95436 690 aa26.49■■□□□ 1.83
PTPN4-202ENST00000420482 NOM1Q5C9Z4 860 aaKnown RBP26.49■■□□□ 1.83
PTPN4-202ENST00000420482 HHIPL2Q6UWX4 724 aa26.49■■□□□ 1.83
PTPN4-202ENST00000420482 WNK4Q96J92 1243 aa26.49■■□□□ 1.83
PTPN4-202ENST00000420482 MYH13Q9UKX3 1938 aa26.49■■□□□ 1.83
PTPN4-202ENST00000420482 TBC1D8O95759 1140 aa26.48■■□□□ 1.83
PTPN4-202ENST00000420482 HNRNPUQ00839 825 aaKnown RBP eCLIP26.48■■□□□ 1.83
PTPN4-202ENST00000420482 GRIK5Q16478 980 aa26.48■■□□□ 1.83
PTPN4-202ENST00000420482 OTUD7BQ6GQQ9 843 aa26.48■■□□□ 1.83
PTPN4-202ENST00000420482 SRGAP3O43295 1099 aa26.47■■□□□ 1.83
PTPN4-202ENST00000420482 TRIM27P14373 513 aa26.47■■□□□ 1.83
PTPN4-202ENST00000420482 FKBP1CQ5VVH2 108 aa26.47■■□□□ 1.83
PTPN4-202ENST00000420482 CLMNQ96JQ2 1002 aa26.47■■□□□ 1.83
PTPN4-202ENST00000420482 CFHR5Q9BXR6 569 aa26.47■■□□□ 1.83
PTPN4-202ENST00000420482 DENND2AQ9ULE3 1009 aa26.47■■□□□ 1.83
PTPN4-202ENST00000420482 AKAP2Q9Y2D5 859 aa26.47■■□□□ 1.83
PTPN4-202ENST00000420482 FAM83AQ86UY5 434 aa26.46■■□□□ 1.83
PTPN4-202ENST00000420482 TMEM39BQ9GZU3 492 aa26.46■■□□□ 1.83
PTPN4-202ENST00000420482 PA2G4Q9UQ80 394 aaKnown RBP26.46■■□□□ 1.83
PTPN4-202ENST00000420482 GNAI2P04899 355 aa26.45■■□□□ 1.82
PTPN4-202ENST00000420482 MTX1Q13505 466 aa26.45■■□□□ 1.82
PTPN4-202ENST00000420482 PKN2Q16513 984 aaKnown RBP26.45■■□□□ 1.82
PTPN4-202ENST00000420482 ZGPATQ8N5A5 531 aaKnown RBP26.45■■□□□ 1.82
PTPN4-202ENST00000420482 TEPSINQ96N21 525 aa26.45■■□□□ 1.82
PTPN4-202ENST00000420482 CSADQ9Y600 493 aa26.45■■□□□ 1.82
PTPN4-202ENST00000420482 GPR25O00155 361 aa26.44■■□□□ 1.82
PTPN4-202ENST00000420482 BCAR3O75815 825 aa26.44■■□□□ 1.82
PTPN4-202ENST00000420482 LDHBP07195 334 aaKnown RBP26.44■■□□□ 1.82
PTPN4-202ENST00000420482 IFNL1Q8IU54 200 aa26.44■■□□□ 1.82
PTPN4-202ENST00000420482 MIER1Q8N108 512 aa26.44■■□□□ 1.82
PTPN4-202ENST00000420482 ZNF296Q8WUU4 475 aaPredicted RBP26.44■■□□□ 1.82
PTPN4-202ENST00000420482 SOX10P56693 466 aa26.43■■□□□ 1.82
PTPN4-202ENST00000420482 ZKSCAN2Q63HK3 967 aa26.43■■□□□ 1.82
PTPN4-202ENST00000420482 APOBEC3HQ6NTF7 200 aaKnown RBP26.43■■□□□ 1.82
PTPN4-202ENST00000420482 SALL1Q9NSC2 1324 aa26.42■■□□□ 1.82
PTPN4-202ENST00000420482 MAP3K9P80192 1104 aa26.42■■□□□ 1.82
PTPN4-202ENST00000420482 CLUAP1Q96AJ1 413 aa26.42■■□□□ 1.82
PTPN4-202ENST00000420482 ELP3Q9H9T3 547 aa26.42■■□□□ 1.82
PTPN4-202ENST00000420482 ZBTB22O15209 634 aa26.41■■□□□ 1.82
PTPN4-202ENST00000420482 FKTNO75072 461 aa26.41■■□□□ 1.82
PTPN4-202ENST00000420482 CACNB3P54284 484 aa26.41■■□□□ 1.82
PTPN4-202ENST00000420482 DCAF15Q66K64 600 aa26.41■■□□□ 1.82
PTPN4-202ENST00000420482 OTOFQ9HC10 1997 aa26.4■■□□□ 1.82
PTPN4-202ENST00000420482 PHKA1P46020 1223 aa26.4■■□□□ 1.82
PTPN4-202ENST00000420482 MVPQ14764 893 aaKnown RBP26.4■■□□□ 1.82
PTPN4-202ENST00000420482 CCDC102BQ68D86 513 aa26.4■■□□□ 1.82
PTPN4-202ENST00000420482 OPTNQ96CV9 577 aa26.4■■□□□ 1.82
PTPN4-202ENST00000420482 HPS5Q9UPZ3 1129 aa26.4■■□□□ 1.82
PTPN4-202ENST00000420482 RPAP1Q9BWH6 1393 aaPredicted RBP26.39■■□□□ 1.82
PTPN4-202ENST00000420482 SLF2Q8IX21 1173 aa26.39■■□□□ 1.82
PTPN4-202ENST00000420482 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.39■■□□□ 1.82
PTPN4-202ENST00000420482 A0A1B0GUL7 405 aa26.38■■□□□ 1.81
PTPN4-202ENST00000420482 PRDX5P30044 214 aa26.38■■□□□ 1.81
PTPN4-202ENST00000420482 SPTY2D1Q68D10 685 aaPredicted RBP26.38■■□□□ 1.81
PTPN4-202ENST00000420482 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms