RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 RGS19P49795 217 aa25.48■■□□□ 1.67
MCF2L-212ENST00000420013 DZIP1LQ8IYY4 767 aaKnown RBP25.48■■□□□ 1.67
MCF2L-212ENST00000420013 KLHDC4Q8TBB5 520 aa25.48■■□□□ 1.67
MCF2L-212ENST00000420013 ZNF70Q9UC06 446 aaPredicted RBP25.48■■□□□ 1.67
MCF2L-212ENST00000420013 SLC5A1P13866 664 aa25.47■■□□□ 1.67
MCF2L-212ENST00000420013 TNNI2P48788 182 aa25.47■■□□□ 1.67
MCF2L-212ENST00000420013 INHBEP58166 350 aa25.47■■□□□ 1.67
MCF2L-212ENST00000420013 SLC10A4Q96EP9 437 aa25.47■■□□□ 1.67
MCF2L-212ENST00000420013 MKRN3Q13064 507 aaKnown RBP25.46■■□□□ 1.67
MCF2L-212ENST00000420013 CHAF1AQ13111 956 aaPredicted RBP25.46■■□□□ 1.67
MCF2L-212ENST00000420013 NBPF12Q5TAG4 269 aaPredicted RBP25.46■■□□□ 1.67
MCF2L-212ENST00000420013 LPIN2Q92539 896 aa25.46■■□□□ 1.67
MCF2L-212ENST00000420013 CIAO1O76071 339 aa25.45■■□□□ 1.66
MCF2L-212ENST00000420013 ANKRD13AQ8IZ07 590 aa25.45■■□□□ 1.66
MCF2L-212ENST00000420013 TEKT1Q969V4 418 aa25.45■■□□□ 1.66
MCF2L-212ENST00000420013 WNK4Q96J92 1243 aa25.45■■□□□ 1.66
MCF2L-212ENST00000420013 TDRD3Q9H7E2 651 aaKnown RBP25.45■■□□□ 1.66
MCF2L-212ENST00000420013 NOB1Q9ULX3 412 aaKnown RBP25.45■■□□□ 1.66
MCF2L-212ENST00000420013 IQSEC3Q9UPP2 1182 aaPredicted RBP25.45■■□□□ 1.66
MCF2L-212ENST00000420013 PKN2Q16513 984 aaKnown RBP25.44■■□□□ 1.66
MCF2L-212ENST00000420013 MRIQ9BWK5 157 aa25.44■■□□□ 1.66
MCF2L-212ENST00000420013 FZD1Q9UP38 647 aa25.44■■□□□ 1.66
MCF2L-212ENST00000420013 RPAP1Q9BWH6 1393 aaPredicted RBP25.44■■□□□ 1.66
MCF2L-212ENST00000420013 BCAMP50895 628 aa25.43■■□□□ 1.66
MCF2L-212ENST00000420013 ZNF296Q8WUU4 475 aaPredicted RBP25.43■■□□□ 1.66
MCF2L-212ENST00000420013 GPR25O00155 361 aa25.42■■□□□ 1.66
MCF2L-212ENST00000420013 TBC1D8O95759 1140 aa25.42■■□□□ 1.66
MCF2L-212ENST00000420013 RARSP54136 660 aaKnown RBP25.42■■□□□ 1.66
MCF2L-212ENST00000420013 MLLT1Q03111 559 aaPredicted RBP25.42■■□□□ 1.66
MCF2L-212ENST00000420013 ATG9AQ7Z3C6 839 aa25.42■■□□□ 1.66
MCF2L-212ENST00000420013 ARHGAP45Q92619 1136 aa25.42■■□□□ 1.66
MCF2L-212ENST00000420013 CLMNQ96JQ2 1002 aa25.42■■□□□ 1.66
MCF2L-212ENST00000420013 ZDHHC15Q96MV8 337 aa25.42■■□□□ 1.66
MCF2L-212ENST00000420013 TMOD2Q9NZR1 351 aa25.42■■□□□ 1.66
MCF2L-212ENST00000420013 USP2O75604 605 aaPredicted RBP25.41■■□□□ 1.66
MCF2L-212ENST00000420013 GRIK5Q16478 980 aa25.41■■□□□ 1.66
MCF2L-212ENST00000420013 FKBP1CQ5VVH2 108 aa25.41■■□□□ 1.66
MCF2L-212ENST00000420013 WDR66Q8TBY9 1149 aa25.41■■□□□ 1.66
MCF2L-212ENST00000420013 TEPSINQ96N21 525 aa25.41■■□□□ 1.66
MCF2L-212ENST00000420013 TCP10L2B9ZVM9 353 aa25.39■■□□□ 1.66
MCF2L-212ENST00000420013 ZBTB22O15209 634 aa25.39■■□□□ 1.66
MCF2L-212ENST00000420013 ATP2B3Q16720 1220 aa25.39■■□□□ 1.66
MCF2L-212ENST00000420013 FAM83AQ86UY5 434 aa25.39■■□□□ 1.66
MCF2L-212ENST00000420013 IFNL1Q8IU54 200 aa25.39■■□□□ 1.66
MCF2L-212ENST00000420013 LRRFIP2Q9Y608 721 aaKnown RBP25.39■■□□□ 1.66
MCF2L-212ENST00000420013 FKTNO75072 461 aa25.38■■□□□ 1.65
MCF2L-212ENST00000420013 IL15P40933 162 aaPredicted RBP25.38■■□□□ 1.65
MCF2L-212ENST00000420013 HHIPL2Q6UWX4 724 aa25.38■■□□□ 1.65
MCF2L-212ENST00000420013 HOOK2Q96ED9 719 aa25.38■■□□□ 1.65
MCF2L-212ENST00000420013 CEP126Q9P2H0 1117 aa25.38■■□□□ 1.65
MCF2L-212ENST00000420013 GNAI3P08754 354 aa25.37■■□□□ 1.65
MCF2L-212ENST00000420013 INTS3Q68E01 1043 aaKnown RBP25.37■■□□□ 1.65
MCF2L-212ENST00000420013 OTUD7BQ6GQQ9 843 aa25.37■■□□□ 1.65
MCF2L-212ENST00000420013 MEIS3Q99687 375 aa25.37■■□□□ 1.65
MCF2L-212ENST00000420013 TMEM39BQ9GZU3 492 aa25.37■■□□□ 1.65
MCF2L-212ENST00000420013 SIL1Q9H173 461 aa25.37■■□□□ 1.65
MCF2L-212ENST00000420013 COPRSQ9NQ92 184 aa25.37■■□□□ 1.65
MCF2L-212ENST00000420013 GNL3LQ9NVN8 582 aaKnown RBP25.37■■□□□ 1.65
MCF2L-212ENST00000420013 SEMA3EO15041 775 aa25.36■■□□□ 1.65
MCF2L-212ENST00000420013 IGF2BP3O00425 579 aaKnown RBP eCLIP25.35■■□□□ 1.65
MCF2L-212ENST00000420013 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.35■■□□□ 1.65
MCF2L-212ENST00000420013 SALL1Q9NSC2 1324 aa25.35■■□□□ 1.65
MCF2L-212ENST00000420013 MYH2Q9UKX2 1941 aa25.34■■□□□ 1.65
MCF2L-212ENST00000420013 TESPA1A2RU30 521 aaPredicted RBP25.34■■□□□ 1.65
MCF2L-212ENST00000420013 IPO8O15397 1037 aaKnown RBP25.34■■□□□ 1.65
MCF2L-212ENST00000420013 GJA5P36382 358 aa25.34■■□□□ 1.65
MCF2L-212ENST00000420013 MTX1Q13505 466 aa25.34■■□□□ 1.65
MCF2L-212ENST00000420013 APOBEC3HQ6NTF7 200 aaKnown RBP25.34■■□□□ 1.65
MCF2L-212ENST00000420013 FBXO46Q6PJ61 603 aaPredicted RBP25.34■■□□□ 1.65
MCF2L-212ENST00000420013 CDAN1Q8IWY9 1227 aa25.34■■□□□ 1.65
MCF2L-212ENST00000420013 OPTNQ96CV9 577 aa25.34■■□□□ 1.65
MCF2L-212ENST00000420013 HPS5Q9UPZ3 1129 aa25.34■■□□□ 1.65
MCF2L-212ENST00000420013 CSADQ9Y600 493 aa25.34■■□□□ 1.65
MCF2L-212ENST00000420013 DOCK2Q92608 1830 aa25.34■■□□□ 1.65
MCF2L-212ENST00000420013 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.33■■□□□ 1.65
MCF2L-212ENST00000420013 ELP3Q9H9T3 547 aa25.33■■□□□ 1.65
MCF2L-212ENST00000420013 DENND2AQ9ULE3 1009 aa25.33■■□□□ 1.65
MCF2L-212ENST00000420013 MAP3K9P80192 1104 aa25.32■■□□□ 1.64
MCF2L-212ENST00000420013 VGLL4Q14135 290 aa25.32■■□□□ 1.64
MCF2L-212ENST00000420013 PDS5AQ29RF7 1337 aaKnown RBP25.32■■□□□ 1.64
MCF2L-212ENST00000420013 AK9Q5TCS8 1911 aa25.31■■□□□ 1.64
MCF2L-212ENST00000420013 CACNB3P54284 484 aa25.31■■□□□ 1.64
MCF2L-212ENST00000420013 DCAF15Q66K64 600 aa25.31■■□□□ 1.64
MCF2L-212ENST00000420013 ZGPATQ8N5A5 531 aaKnown RBP25.31■■□□□ 1.64
MCF2L-212ENST00000420013 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.31■■□□□ 1.64
MCF2L-212ENST00000420013 PA2G4Q9UQ80 394 aaKnown RBP25.31■■□□□ 1.64
MCF2L-212ENST00000420013 LDHBP07195 334 aaKnown RBP25.3■■□□□ 1.64
MCF2L-212ENST00000420013 R3HDMLQ9H3Y0 253 aa25.3■■□□□ 1.64
MCF2L-212ENST00000420013 DAGLAQ9Y4D2 1042 aa25.3■■□□□ 1.64
MCF2L-212ENST00000420013 SPDYE5A6NIY4 337 aa25.29■■□□□ 1.64
MCF2L-212ENST00000420013 TNRC18O15417 2968 aaPredicted RBP25.29■■□□□ 1.64
MCF2L-212ENST00000420013 PRDX5P30044 214 aa25.29■■□□□ 1.64
MCF2L-212ENST00000420013 ATF7IPQ6VMQ6 1270 aa25.29■■□□□ 1.64
MCF2L-212ENST00000420013 PDE4DIPQ5VU43 2346 aa25.28■■□□□ 1.64
MCF2L-212ENST00000420013 SRGAP3O43295 1099 aa25.28■■□□□ 1.64
MCF2L-212ENST00000420013 TRIM27P14373 513 aa25.28■■□□□ 1.64
MCF2L-212ENST00000420013 PHKA1P46020 1223 aa25.28■■□□□ 1.64
MCF2L-212ENST00000420013 GTF2A2P52657 109 aa25.28■■□□□ 1.64
MCF2L-212ENST00000420013 ERO1AQ96HE7 468 aa25.28■■□□□ 1.64
MCF2L-212ENST00000420013 MS4A4AQ96JQ5 239 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms