RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 FOXD4L4Q8WXT5 416 aaPredicted RBP9.66□□□□□ -0.86
COL12A1-204ENST00000419671 NRXN2Q9P2S2 1712 aa9.65□□□□□ -0.86
COL12A1-204ENST00000419671 MAST2Q6P0Q8 1798 aa9.65□□□□□ -0.86
COL12A1-204ENST00000419671 HMGB1P09429 215 aaKnown RBP9.65□□□□□ -0.86
COL12A1-204ENST00000419671 GYG1P46976 350 aa9.65□□□□□ -0.86
COL12A1-204ENST00000419671 MCTP1Q6DN14 999 aa9.65□□□□□ -0.86
COL12A1-204ENST00000419671 Q6ZUG5 572 aa9.65□□□□□ -0.86
COL12A1-204ENST00000419671 RYDENQ9NUL5 291 aaKnown RBP9.65□□□□□ -0.86
COL12A1-204ENST00000419671 SMC3Q9UQE7 1217 aa9.65□□□□□ -0.86
COL12A1-204ENST00000419671 RGPD3A6NKT7 1758 aaPredicted RBP9.65□□□□□ -0.86
COL12A1-204ENST00000419671 RGPD4Q7Z3J3 1758 aa9.65□□□□□ -0.86
COL12A1-204ENST00000419671 GOLGB1Q14789 3259 aaKnown RBP9.65□□□□□ -0.87
COL12A1-204ENST00000419671 TIAM2Q8IVF5 1701 aa9.64□□□□□ -0.87
COL12A1-204ENST00000419671 KLRK1P26718 216 aa9.64□□□□□ -0.87
COL12A1-204ENST00000419671 GJB2P29033 226 aa9.64□□□□□ -0.87
COL12A1-204ENST00000419671 EXOSC10Q01780 885 aaKnown RBP9.64□□□□□ -0.87
COL12A1-204ENST00000419671 TXNRD1Q16881 649 aa9.64□□□□□ -0.87
COL12A1-204ENST00000419671 ZNF772Q68DY9 489 aaPredicted RBP9.64□□□□□ -0.87
COL12A1-204ENST00000419671 DHX32Q7L7V1 743 aaKnown RBP9.64□□□□□ -0.87
COL12A1-204ENST00000419671 SLC51AQ86UW1 340 aa9.64□□□□□ -0.87
COL12A1-204ENST00000419671 MAGEB6Q8N7X4 407 aa9.64□□□□□ -0.87
COL12A1-204ENST00000419671 LRRC2Q9BYS8 371 aa9.64□□□□□ -0.87
COL12A1-204ENST00000419671 AGXT2Q9BYV1 514 aa9.64□□□□□ -0.87
COL12A1-204ENST00000419671 CREBZFQ9NS37 354 aa9.64□□□□□ -0.87
COL12A1-204ENST00000419671 CTNNA3Q9UI47 895 aa9.64□□□□□ -0.87
COL12A1-204ENST00000419671 IQSEC3Q9UPP2 1182 aaPredicted RBP9.64□□□□□ -0.87
COL12A1-204ENST00000419671 PYGBP11216 843 aa9.64□□□□□ -0.87
COL12A1-204ENST00000419671 SYT1P21579 422 aa9.64□□□□□ -0.87
COL12A1-204ENST00000419671 HAND2P61296 217 aa9.64□□□□□ -0.87
COL12A1-204ENST00000419671 MAP3K12Q12852 859 aa9.64□□□□□ -0.87
COL12A1-204ENST00000419671 PRR5LQ6MZQ0 368 aa9.64□□□□□ -0.87
COL12A1-204ENST00000419671 CNBD1Q8NA66 436 aa9.64□□□□□ -0.87
COL12A1-204ENST00000419671 FAM84BQ96KN1 310 aaPredicted RBP9.64□□□□□ -0.87
COL12A1-204ENST00000419671 STRBPQ96SI9 672 aaKnown RBP9.64□□□□□ -0.87
COL12A1-204ENST00000419671 NBPF3Q9H094 633 aa9.64□□□□□ -0.87
COL12A1-204ENST00000419671 GZF1Q9H116 711 aaPredicted RBP9.64□□□□□ -0.87
COL12A1-204ENST00000419671 LMBRD1Q9NUN5 540 aa9.64□□□□□ -0.87
COL12A1-204ENST00000419671 WDR33Q9C0J8 1336 aaKnown RBP9.64□□□□□ -0.87
COL12A1-204ENST00000419671 LRRC37AA6NMS7 1700 aa9.63□□□□□ -0.87
COL12A1-204ENST00000419671 GOLGA6L22H0YM25 854 aa9.63□□□□□ -0.87
COL12A1-204ENST00000419671 NPHP1O15259 732 aa9.63□□□□□ -0.87
COL12A1-204ENST00000419671 STX6O43752 255 aa9.63□□□□□ -0.87
COL12A1-204ENST00000419671 PTMSP20962 102 aa9.63□□□□□ -0.87
COL12A1-204ENST00000419671 STK3Q13188 491 aa9.63□□□□□ -0.87
COL12A1-204ENST00000419671 IMMTQ16891 758 aaKnown RBP9.63□□□□□ -0.87
COL12A1-204ENST00000419671 BRF1Q92994 677 aa9.63□□□□□ -0.87
COL12A1-204ENST00000419671 IRS2Q9Y4H2 1338 aa9.63□□□□□ -0.87
COL12A1-204ENST00000419671 LTBP1Q14766 1721 aa9.63□□□□□ -0.87
COL12A1-204ENST00000419671 ECM29Q5VYK3 1845 aa9.62□□□□□ -0.87
COL12A1-204ENST00000419671 CAVIN4Q5BKX8 364 aa9.62□□□□□ -0.87
COL12A1-204ENST00000419671 CHST3Q7LGC8 479 aa9.62□□□□□ -0.87
COL12A1-204ENST00000419671 FBXO33Q7Z6M2 555 aa9.62□□□□□ -0.87
COL12A1-204ENST00000419671 GTF3C6Q969F1 213 aa9.62□□□□□ -0.87
COL12A1-204ENST00000419671 AIDAQ96BJ3 306 aa9.62□□□□□ -0.87
COL12A1-204ENST00000419671 MYH2Q9UKX2 1941 aa9.62□□□□□ -0.87
COL12A1-204ENST00000419671 LAMB1P07942 1786 aa9.62□□□□□ -0.87
COL12A1-204ENST00000419671 ZNF213O14771 459 aa9.62□□□□□ -0.87
COL12A1-204ENST00000419671 SERPINB2P05120 415 aa9.62□□□□□ -0.87
COL12A1-204ENST00000419671 ZSCAN22P10073 491 aaPredicted RBP9.62□□□□□ -0.87
COL12A1-204ENST00000419671 DDR1Q08345 913 aa9.62□□□□□ -0.87
COL12A1-204ENST00000419671 GRAPQ13588 217 aa9.62□□□□□ -0.87
COL12A1-204ENST00000419671 SKOR2Q2VWA4 1001 aaPredicted RBP9.62□□□□□ -0.87
COL12A1-204ENST00000419671 CRY2Q49AN0 593 aa9.62□□□□□ -0.87
COL12A1-204ENST00000419671 ADGRA1Q86SQ6 560 aa9.62□□□□□ -0.87
COL12A1-204ENST00000419671 TXNRD3Q86VQ6 643 aa9.62□□□□□ -0.87
COL12A1-204ENST00000419671 FBXL16Q8N461 479 aa9.62□□□□□ -0.87
COL12A1-204ENST00000419671 GRAPLQ8TC17 118 aaPredicted RBP9.62□□□□□ -0.87
COL12A1-204ENST00000419671 ANKRD2Q9GZV1 360 aa9.62□□□□□ -0.87
COL12A1-204ENST00000419671 EPB41L4AQ9HCS5 686 aaPredicted RBP9.62□□□□□ -0.87
COL12A1-204ENST00000419671 LRP2BPQ9P2M1 347 aa9.62□□□□□ -0.87
COL12A1-204ENST00000419671 NAP1L2Q9ULW6 460 aaPredicted RBP9.62□□□□□ -0.87
COL12A1-204ENST00000419671 CDK5RAP2Q96SN8 1893 aa9.62□□□□□ -0.87
COL12A1-204ENST00000419671 COL11A2P13942 1736 aaPredicted RBP9.61□□□□□ -0.87
COL12A1-204ENST00000419671 ZMYM6O95789 1325 aa9.61□□□□□ -0.87
COL12A1-204ENST00000419671 PLSCR1O15162 318 aa9.61□□□□□ -0.87
COL12A1-204ENST00000419671 MBD4O95243 580 aa9.61□□□□□ -0.87
COL12A1-204ENST00000419671 APOBRQ0VD83 1088 aa9.61□□□□□ -0.87
COL12A1-204ENST00000419671 SCRN1Q12765 414 aa9.61□□□□□ -0.87
COL12A1-204ENST00000419671 ZNF827Q17R98 1081 aa9.61□□□□□ -0.87
COL12A1-204ENST00000419671 KLHL40Q2TBA0 621 aa9.61□□□□□ -0.87
COL12A1-204ENST00000419671 TBC1D10CQ8IV04 446 aa9.61□□□□□ -0.87
COL12A1-204ENST00000419671 MB21D2Q8IYB1 491 aaPredicted RBP9.61□□□□□ -0.87
COL12A1-204ENST00000419671 LCORLQ8N3X6 602 aa9.61□□□□□ -0.87
COL12A1-204ENST00000419671 NKX2-3Q8TAU0 364 aa9.61□□□□□ -0.87
COL12A1-204ENST00000419671 ZNF384Q8TF68 577 aa9.61□□□□□ -0.87
COL12A1-204ENST00000419671 ARMT1Q9H993 441 aa9.61□□□□□ -0.87
COL12A1-204ENST00000419671 GNL3LQ9NVN8 582 aaKnown RBP9.61□□□□□ -0.87
COL12A1-204ENST00000419671 TFCP2L1Q9NZI6 479 aa9.61□□□□□ -0.87
COL12A1-204ENST00000419671 DENND2AQ9ULE3 1009 aa9.61□□□□□ -0.87
COL12A1-204ENST00000419671 MTMR6Q9Y217 621 aa9.61□□□□□ -0.87
COL12A1-204ENST00000419671 PNPLA7Q6ZV29 1317 aa9.6□□□□□ -0.87
COL12A1-204ENST00000419671 PATL2C9JE40 543 aaKnown RBP9.6□□□□□ -0.87
COL12A1-204ENST00000419671 POLRMTO00411 1230 aaKnown RBP9.6□□□□□ -0.87
COL12A1-204ENST00000419671 PRPF40AO75400 957 aaKnown RBP9.6□□□□□ -0.87
COL12A1-204ENST00000419671 F13A1P00488 732 aa9.6□□□□□ -0.87
COL12A1-204ENST00000419671 APPP05067 770 aa9.6□□□□□ -0.87
COL12A1-204ENST00000419671 ANTXR2P58335 489 aa9.6□□□□□ -0.87
COL12A1-204ENST00000419671 ALX1Q15699 326 aa9.6□□□□□ -0.87
COL12A1-204ENST00000419671 FOXD4L6Q3SYB3 417 aaPredicted RBP9.6□□□□□ -0.87
COL12A1-204ENST00000419671 FOXD4L3Q6VB84 417 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms