RNA–Protein interactions for RNA: ENST00000419220.1

LINC02539-202, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2

Gene LINC02539, Length 703 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-202ENST00000419220 DDX19BQ9UMR2 479 aa8.38□□□□□ -1.07
LINC02539-202ENST00000419220 ATP6V0A2Q9Y487 856 aa8.38□□□□□ -1.07
LINC02539-202ENST00000419220 RTL9Q8NET4 1388 aa8.37□□□□□ -1.07
LINC02539-202ENST00000419220 UTYO14607 1347 aa8.37□□□□□ -1.07
LINC02539-202ENST00000419220 LTBP3Q9NS15 1303 aa8.37□□□□□ -1.07
LINC02539-202ENST00000419220 ANKRD31Q8N7Z5 1873 aa8.37□□□□□ -1.07
LINC02539-202ENST00000419220 DDX11L8A8MPP1 907 aa8.37□□□□□ -1.07
LINC02539-202ENST00000419220 TRIM27P14373 513 aa8.37□□□□□ -1.07
LINC02539-202ENST00000419220 ITGA6P23229 1130 aa8.37□□□□□ -1.07
LINC02539-202ENST00000419220 YY1P25490 414 aa8.37□□□□□ -1.07
LINC02539-202ENST00000419220 DNAJB2P25686 324 aa8.37□□□□□ -1.07
LINC02539-202ENST00000419220 COPS2P61201 443 aa8.37□□□□□ -1.07
LINC02539-202ENST00000419220 FKBP4Q02790 459 aaKnown RBP eCLIP8.37□□□□□ -1.07
LINC02539-202ENST00000419220 AAMPQ13685 434 aa8.37□□□□□ -1.07
LINC02539-202ENST00000419220 TTLL11Q8NHH1 800 aa8.37□□□□□ -1.07
LINC02539-202ENST00000419220 PCMTD1Q96MG8 357 aaPredicted RBP8.37□□□□□ -1.07
LINC02539-202ENST00000419220 AAASQ9NRG9 546 aa8.37□□□□□ -1.07
LINC02539-202ENST00000419220 CNNM1Q9NRU3 951 aa8.37□□□□□ -1.07
LINC02539-202ENST00000419220 POLR3EQ9NVU0 708 aa8.37□□□□□ -1.07
LINC02539-202ENST00000419220 BSDC1Q9NW68 430 aaPredicted RBP8.37□□□□□ -1.07
LINC02539-202ENST00000419220 ABCC12Q96J65 1359 aa8.36□□□□□ -1.07
LINC02539-202ENST00000419220 ABCC4O15439 1325 aa8.36□□□□□ -1.07
LINC02539-202ENST00000419220 KDM2BQ8NHM5 1336 aa8.36□□□□□ -1.07
LINC02539-202ENST00000419220 LAMB2P55268 1798 aa8.36□□□□□ -1.07
LINC02539-202ENST00000419220 RNF223E7ERA6 249 aa8.36□□□□□ -1.07
LINC02539-202ENST00000419220 C6orf229H3BNL8 230 aa8.36□□□□□ -1.07
LINC02539-202ENST00000419220 HMMRO75330 724 aa8.36□□□□□ -1.07
LINC02539-202ENST00000419220 CSF1RP07333 972 aa8.36□□□□□ -1.07
LINC02539-202ENST00000419220 YBX3P16989 372 aaKnown RBP eCLIP8.36□□□□□ -1.07
LINC02539-202ENST00000419220 ATP2B4P23634 1241 aa8.36□□□□□ -1.07
LINC02539-202ENST00000419220 EIF6P56537 245 aaKnown RBP8.36□□□□□ -1.07
LINC02539-202ENST00000419220 SH3D19Q5HYK7 790 aa8.36□□□□□ -1.07
LINC02539-202ENST00000419220 LMBR1LQ6UX01 489 aa8.36□□□□□ -1.07
LINC02539-202ENST00000419220 LDHAL6AQ6ZMR3 332 aa8.36□□□□□ -1.07
LINC02539-202ENST00000419220 ERICH6Q7L0X2 663 aa8.36□□□□□ -1.07
LINC02539-202ENST00000419220 CLUAP1Q96AJ1 413 aa8.36□□□□□ -1.07
LINC02539-202ENST00000419220 PRR14Q9BWN1 585 aa8.36□□□□□ -1.07
LINC02539-202ENST00000419220 ZC3H12CQ9C0D7 883 aaKnown RBP8.36□□□□□ -1.07
LINC02539-202ENST00000419220 GGA1Q9UJY5 639 aa8.36□□□□□ -1.07
LINC02539-202ENST00000419220 WWC3Q9ULE0 1092 aa8.36□□□□□ -1.07
LINC02539-202ENST00000419220 NSFL1CQ9UNZ2 370 aaKnown RBP8.36□□□□□ -1.07
LINC02539-202ENST00000419220 LEMD3Q9Y2U8 911 aa8.36□□□□□ -1.07
LINC02539-202ENST00000419220 BRCA1P38398 1863 aaKnown RBP8.36□□□□□ -1.07
LINC02539-202ENST00000419220 XDHP47989 1333 aa8.35□□□□□ -1.07
LINC02539-202ENST00000419220 CACNA1SQ13698 1873 aa8.35□□□□□ -1.07
LINC02539-202ENST00000419220 SLC4A3P48751 1232 aa8.35□□□□□ -1.07
LINC02539-202ENST00000419220 WASHC4Q2M389 1173 aa8.35□□□□□ -1.07
LINC02539-202ENST00000419220 HSP90AB4PQ58FF6 505 aa8.35□□□□□ -1.07
LINC02539-202ENST00000419220 ZNF697Q5TEC3 545 aa8.35□□□□□ -1.07
LINC02539-202ENST00000419220 SYNE4Q8N205 404 aa8.35□□□□□ -1.07
LINC02539-202ENST00000419220 LARGE2Q8N3Y3 721 aa8.35□□□□□ -1.07
LINC02539-202ENST00000419220 USP44Q9H0E7 712 aa8.35□□□□□ -1.07
LINC02539-202ENST00000419220 TMEM134Q9H6X4 195 aa8.35□□□□□ -1.07
LINC02539-202ENST00000419220 RNF181Q9P0P0 153 aa8.35□□□□□ -1.07
LINC02539-202ENST00000419220 MROH5Q6ZUA9 1318 aa8.34□□□□□ -1.07
LINC02539-202ENST00000419220 ST8SIA5O15466 376 aa8.34□□□□□ -1.07
LINC02539-202ENST00000419220 CENPBP07199 599 aaPredicted RBP8.34□□□□□ -1.07
LINC02539-202ENST00000419220 NBPF7P0C2Y1 421 aaPredicted RBP8.34□□□□□ -1.07
LINC02539-202ENST00000419220 IARSP41252 1262 aaKnown RBP8.34□□□□□ -1.07
LINC02539-202ENST00000419220 TNIP1Q15025 636 aa8.34□□□□□ -1.07
LINC02539-202ENST00000419220 MYSM1Q5VVJ2 828 aa8.34□□□□□ -1.07
LINC02539-202ENST00000419220 C9orf131Q5VYM1 1079 aa8.34□□□□□ -1.07
LINC02539-202ENST00000419220 NIM1KQ8IY84 436 aa8.34□□□□□ -1.07
LINC02539-202ENST00000419220 C16orf71Q8IYS4 520 aaPredicted RBP8.34□□□□□ -1.07
LINC02539-202ENST00000419220 ANKLE1Q8NAG6 615 aa8.34□□□□□ -1.07
LINC02539-202ENST00000419220 PROCA1Q8NCQ7 364 aaPredicted RBP8.34□□□□□ -1.07
LINC02539-202ENST00000419220 JARID2Q92833 1246 aaPredicted RBP8.34□□□□□ -1.07
LINC02539-202ENST00000419220 CCDC85AQ96PX6 553 aaPredicted RBP8.34□□□□□ -1.07
LINC02539-202ENST00000419220 TBC1D2Q9BYX2 928 aa8.34□□□□□ -1.07
LINC02539-202ENST00000419220 GREM2Q9H772 168 aa8.34□□□□□ -1.07
LINC02539-202ENST00000419220 GOPCQ9HD26 462 aa8.34□□□□□ -1.07
LINC02539-202ENST00000419220 DDX60Q8IY21 1712 aaKnown RBP8.34□□□□□ -1.07
LINC02539-202ENST00000419220 SLX4Q8IY92 1834 aa8.33□□□□□ -1.08
LINC02539-202ENST00000419220 PPIP5K2O43314 1243 aa8.33□□□□□ -1.08
LINC02539-202ENST00000419220 MMP14P50281 582 aa8.33□□□□□ -1.08
LINC02539-202ENST00000419220 CASP7P55210 303 aa8.33□□□□□ -1.08
LINC02539-202ENST00000419220 FOXO4P98177 505 aa8.33□□□□□ -1.08
LINC02539-202ENST00000419220 G3BP1Q13283 466 aaKnown RBP eCLIP8.33□□□□□ -1.08
LINC02539-202ENST00000419220 MVPQ14764 893 aaKnown RBP8.33□□□□□ -1.08
LINC02539-202ENST00000419220 CAVIN4Q5BKX8 364 aa8.33□□□□□ -1.08
LINC02539-202ENST00000419220 VPS37DQ86XT2 251 aa8.33□□□□□ -1.08
LINC02539-202ENST00000419220 SLF2Q8IX21 1173 aa8.33□□□□□ -1.08
LINC02539-202ENST00000419220 RPAP2Q8IXW5 612 aaPredicted RBP8.33□□□□□ -1.08
LINC02539-202ENST00000419220 TMEM57Q8N5G2 664 aa8.33□□□□□ -1.08
LINC02539-202ENST00000419220 C7orf43Q8WVR3 580 aa8.33□□□□□ -1.08
LINC02539-202ENST00000419220 CELF1Q92879 486 aaKnown RBP8.33□□□□□ -1.08
LINC02539-202ENST00000419220 SUCLG2Q96I99 432 aa8.33□□□□□ -1.08
LINC02539-202ENST00000419220 BICC1Q9H694 974 aaKnown RBP8.33□□□□□ -1.08
LINC02539-202ENST00000419220 PODXL2Q9NZ53 605 aa8.33□□□□□ -1.08
LINC02539-202ENST00000419220 AKAP2Q9Y2D5 859 aa8.33□□□□□ -1.08
LINC02539-202ENST00000419220 KIAA1551Q9HCM1 1747 aa8.32□□□□□ -1.08
LINC02539-202ENST00000419220 IQCA1LA6NCM1 817 aa8.32□□□□□ -1.08
LINC02539-202ENST00000419220 FAM181BA6NEQ2 426 aa8.32□□□□□ -1.08
LINC02539-202ENST00000419220 SRGAP3O43295 1099 aa8.32□□□□□ -1.08
LINC02539-202ENST00000419220 GDF9O60383 454 aa8.32□□□□□ -1.08
LINC02539-202ENST00000419220 UFL1O94874 794 aa8.32□□□□□ -1.08
LINC02539-202ENST00000419220 CD46P15529 392 aa8.32□□□□□ -1.08
LINC02539-202ENST00000419220 LMOD1P29536 600 aaPredicted RBP8.32□□□□□ -1.08
LINC02539-202ENST00000419220 IL15P40933 162 aaPredicted RBP8.32□□□□□ -1.08
LINC02539-202ENST00000419220 OS9Q13438 667 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms