RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 XAGE2Q96GT9 111 aa25.12■■□□□ 1.61
GTF3A-202ENST00000419181 DDX19BQ9UMR2 479 aa25.12■■□□□ 1.61
GTF3A-202ENST00000419181 COG6Q9Y2V7 657 aa25.12■■□□□ 1.61
GTF3A-202ENST00000419181 FOXN1O15353 648 aa25.11■■□□□ 1.61
GTF3A-202ENST00000419181 MAP2K1Q02750 393 aaPredicted RBP25.11■■□□□ 1.61
GTF3A-202ENST00000419181 MRIQ9BWK5 157 aa25.11■■□□□ 1.61
GTF3A-202ENST00000419181 DEFB129Q9H1M3 183 aa25.11■■□□□ 1.61
GTF3A-202ENST00000419181 WBP1LQ9NX94 342 aa25.11■■□□□ 1.61
GTF3A-202ENST00000419181 DENND2AQ9ULE3 1009 aa25.11■■□□□ 1.61
GTF3A-202ENST00000419181 NOP58Q9Y2X3 529 aaKnown RBP25.11■■□□□ 1.61
GTF3A-202ENST00000419181 MAST3O60307 1309 aa25.11■■□□□ 1.61
GTF3A-202ENST00000419181 SPDYE2Q495Y8 402 aa25.1■■□□□ 1.61
GTF3A-202ENST00000419181 RGMBQ6NW40 437 aa25.1■■□□□ 1.61
GTF3A-202ENST00000419181 TEKT1Q969V4 418 aa25.1■■□□□ 1.61
GTF3A-202ENST00000419181 PPP2R3BQ9Y5P8 575 aa25.1■■□□□ 1.61
GTF3A-202ENST00000419181 SALL1Q9NSC2 1324 aa25.1■■□□□ 1.61
GTF3A-202ENST00000419181 AOC2O75106 756 aa25.09■■□□□ 1.61
GTF3A-202ENST00000419181 SURF6O75683 361 aaKnown RBP25.09■■□□□ 1.61
GTF3A-202ENST00000419181 NF2P35240 595 aa25.09■■□□□ 1.61
GTF3A-202ENST00000419181 MAP2K2P36507 400 aa25.09■■□□□ 1.61
GTF3A-202ENST00000419181 RASGRF1Q13972 1273 aa25.09■■□□□ 1.61
GTF3A-202ENST00000419181 NEUROD6Q96NK8 337 aa25.09■■□□□ 1.61
GTF3A-202ENST00000419181 TDRD3Q9H7E2 651 aaKnown RBP25.09■■□□□ 1.61
GTF3A-202ENST00000419181 VEZTQ9HBM0 779 aa25.09■■□□□ 1.61
GTF3A-202ENST00000419181 ZNF70Q9UC06 446 aaPredicted RBP25.09■■□□□ 1.61
GTF3A-202ENST00000419181 PDS5AQ29RF7 1337 aaKnown RBP25.09■■□□□ 1.61
GTF3A-202ENST00000419181 PDE3AQ14432 1141 aa25.08■■□□□ 1.61
GTF3A-202ENST00000419181 ZDHHC15Q96MV8 337 aa25.08■■□□□ 1.61
GTF3A-202ENST00000419181 GPR108Q9NPR9 543 aa25.08■■□□□ 1.61
GTF3A-202ENST00000419181 ZBTB40Q9NUA8 1239 aa25.08■■□□□ 1.61
GTF3A-202ENST00000419181 PRDX5P30044 214 aa25.07■■□□□ 1.6
GTF3A-202ENST00000419181 CTCFP49711 727 aaPredicted RBP25.07■■□□□ 1.6
GTF3A-202ENST00000419181 OS9Q13438 667 aaPredicted RBP25.07■■□□□ 1.6
GTF3A-202ENST00000419181 C20orf194Q5TEA3 1177 aa25.07■■□□□ 1.6
GTF3A-202ENST00000419181 MOB2Q70IA6 237 aa25.07■■□□□ 1.6
GTF3A-202ENST00000419181 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.07■■□□□ 1.6
GTF3A-202ENST00000419181 SSC5DA1L4H1 1573 aa25.06■■□□□ 1.6
GTF3A-202ENST00000419181 FAM155AB1AL88 458 aaPredicted RBP25.06■■□□□ 1.6
GTF3A-202ENST00000419181 NOGQ13253 232 aa25.06■■□□□ 1.6
GTF3A-202ENST00000419181 HHIPL2Q6UWX4 724 aa25.06■■□□□ 1.6
GTF3A-202ENST00000419181 BEGAINQ9BUH8 593 aa25.06■■□□□ 1.6
GTF3A-202ENST00000419181 ZNF157P51786 506 aaPredicted RBP25.05■■□□□ 1.6
GTF3A-202ENST00000419181 TNFAIP1Q13829 316 aa25.05■■□□□ 1.6
GTF3A-202ENST00000419181 TNNI3KQ59H18 835 aa25.05■■□□□ 1.6
GTF3A-202ENST00000419181 APOBEC3HQ6NTF7 200 aaKnown RBP25.05■■□□□ 1.6
GTF3A-202ENST00000419181 TNS4Q8IZW8 715 aa25.05■■□□□ 1.6
GTF3A-202ENST00000419181 CCDC102AQ96A19 550 aa25.05■■□□□ 1.6
GTF3A-202ENST00000419181 FPGT-TNNI3KV9GXZ4 949 aa25.05■■□□□ 1.6
GTF3A-202ENST00000419181 LDHBP07195 334 aaKnown RBP25.04■■□□□ 1.6
GTF3A-202ENST00000419181 RASA3Q14644 834 aa25.04■■□□□ 1.6
GTF3A-202ENST00000419181 CHMP4BQ9H444 224 aaKnown RBP25.04■■□□□ 1.6
GTF3A-202ENST00000419181 UBE2Q2LH0YL09 131 aa25.03■■□□□ 1.6
GTF3A-202ENST00000419181 SLC10A3P09131 477 aa25.03■■□□□ 1.6
GTF3A-202ENST00000419181 ARID4AP29374 1257 aaPredicted RBP25.03■■□□□ 1.6
GTF3A-202ENST00000419181 TTLL12Q14166 644 aaPredicted RBP25.03■■□□□ 1.6
GTF3A-202ENST00000419181 GORABQ5T7V8 394 aa25.03■■□□□ 1.6
GTF3A-202ENST00000419181 RPAP2Q8IXW5 612 aaPredicted RBP25.03■■□□□ 1.6
GTF3A-202ENST00000419181 ZGPATQ8N5A5 531 aaKnown RBP25.03■■□□□ 1.6
GTF3A-202ENST00000419181 YTHDC1Q96MU7 727 aaKnown RBP25.03■■□□□ 1.6
GTF3A-202ENST00000419181 DIXDC1Q155Q3 683 aa25.02■■□□□ 1.6
GTF3A-202ENST00000419181 ZIC5Q96T25 663 aa25.02■■□□□ 1.6
GTF3A-202ENST00000419181 TCP10L2B9ZVM9 353 aa25.01■■□□□ 1.59
GTF3A-202ENST00000419181 LBX1P52954 281 aa25.01■■□□□ 1.59
GTF3A-202ENST00000419181 SUPT20HL1Q3ZLR7 823 aa25.01■■□□□ 1.59
GTF3A-202ENST00000419181 NBPF12Q5TAG4 269 aaPredicted RBP25.01■■□□□ 1.59
GTF3A-202ENST00000419181 ARMC9Q7Z3E5 817 aa25.01■■□□□ 1.59
GTF3A-202ENST00000419181 RASAL3Q86YV0 1011 aa25.01■■□□□ 1.59
GTF3A-202ENST00000419181 HMG20BQ9P0W2 317 aa25.01■■□□□ 1.59
GTF3A-202ENST00000419181 EXOC6BQ9Y2D4 811 aa25.01■■□□□ 1.59
GTF3A-202ENST00000419181 DAGLAQ9Y4D2 1042 aa25.01■■□□□ 1.59
GTF3A-202ENST00000419181 MYH2Q9UKX2 1941 aa25■■□□□ 1.59
GTF3A-202ENST00000419181 PRKG1Q13976 671 aa25■■□□□ 1.59
GTF3A-202ENST00000419181 SIRT2Q8IXJ6 389 aa25■■□□□ 1.59
GTF3A-202ENST00000419181 SPATA5Q8NB90 893 aa25■■□□□ 1.59
GTF3A-202ENST00000419181 TEPSINQ96N21 525 aa25■■□□□ 1.59
GTF3A-202ENST00000419181 DBNDD2Q9BQY9 259 aa25■■□□□ 1.59
GTF3A-202ENST00000419181 PRDM10Q9NQV6 1147 aa25■■□□□ 1.59
GTF3A-202ENST00000419181 UQCRFS1P1P0C7P4 283 aa24.99■■□□□ 1.59
GTF3A-202ENST00000419181 TNNI2P48788 182 aa24.99■■□□□ 1.59
GTF3A-202ENST00000419181 CACNB3P54284 484 aa24.99■■□□□ 1.59
GTF3A-202ENST00000419181 MAP3K11Q16584 847 aa24.99■■□□□ 1.59
GTF3A-202ENST00000419181 LDLRAD1Q5T700 205 aa24.99■■□□□ 1.59
GTF3A-202ENST00000419181 FKBP1CQ5VVH2 108 aa24.99■■□□□ 1.59
GTF3A-202ENST00000419181 PI16Q6UXB8 463 aa24.99■■□□□ 1.59
GTF3A-202ENST00000419181 ERC1Q8IUD2 1116 aa24.99■■□□□ 1.59
GTF3A-202ENST00000419181 ABCF2Q9UG63 623 aa24.99■■□□□ 1.59
GTF3A-202ENST00000419181 ANGEL1Q9UNK9 670 aaKnown RBP24.99■■□□□ 1.59
GTF3A-202ENST00000419181 FZD1Q9UP38 647 aa24.99■■□□□ 1.59
GTF3A-202ENST00000419181 AKAP11Q9UKA4 1901 aa24.98■■□□□ 1.59
GTF3A-202ENST00000419181 HSPA8P11142 646 aaKnown RBP24.98■■□□□ 1.59
GTF3A-202ENST00000419181 MCAMP43121 646 aa24.98■■□□□ 1.59
GTF3A-202ENST00000419181 TMEM39BQ9GZU3 492 aa24.98■■□□□ 1.59
GTF3A-202ENST00000419181 TMOD2Q9NZR1 351 aa24.98■■□□□ 1.59
GTF3A-202ENST00000419181 PPP1R12BO60237 982 aaPredicted RBP24.97■■□□□ 1.59
GTF3A-202ENST00000419181 HMMRO75330 724 aa24.97■■□□□ 1.59
GTF3A-202ENST00000419181 HSP90AB4PQ58FF6 505 aa24.97■■□□□ 1.59
GTF3A-202ENST00000419181 SPTY2D1Q68D10 685 aaPredicted RBP24.97■■□□□ 1.59
GTF3A-202ENST00000419181 CDAN1Q8IWY9 1227 aa24.97■■□□□ 1.59
GTF3A-202ENST00000419181 EAF2Q96CJ1 260 aaPredicted RBP24.97■■□□□ 1.59
GTF3A-202ENST00000419181 DBNLQ9UJU6 430 aaKnown RBP24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms