RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 NUP133Q8WUM0 1156 aa13.4□□□□□ -0.27
DDR1-232ENST00000418800 PPP2R2CQ9Y2T4 447 aa13.4□□□□□ -0.27
DDR1-232ENST00000418800 KIF5CO60282 957 aa13.39□□□□□ -0.27
DDR1-232ENST00000418800 TFRCP02786 760 aaKnown RBP13.39□□□□□ -0.27
DDR1-232ENST00000418800 GPR161Q8N6U8 529 aaKnown RBP13.39□□□□□ -0.27
DDR1-232ENST00000418800 CAGE1Q8TC20 777 aa13.39□□□□□ -0.27
DDR1-232ENST00000418800 ACBD3Q9H3P7 528 aa13.39□□□□□ -0.27
DDR1-232ENST00000418800 PIK3C2BO00750 1634 aa13.39□□□□□ -0.27
DDR1-232ENST00000418800 ZMYND10O75800 440 aa13.39□□□□□ -0.27
DDR1-232ENST00000418800 PRR29P0C7W0 189 aa13.39□□□□□ -0.27
DDR1-232ENST00000418800 STAMQ92783 540 aa13.39□□□□□ -0.27
DDR1-232ENST00000418800 PRC1O43663 620 aa13.38□□□□□ -0.27
DDR1-232ENST00000418800 PROSER2Q86WR7 435 aaPredicted RBP13.38□□□□□ -0.27
DDR1-232ENST00000418800 PCMTD1Q96MG8 357 aaPredicted RBP13.38□□□□□ -0.27
DDR1-232ENST00000418800 ALG1Q9BT22 464 aa13.38□□□□□ -0.27
DDR1-232ENST00000418800 AATKQ6ZMQ8 1374 aa13.38□□□□□ -0.27
DDR1-232ENST00000418800 IDH1O75874 414 aaKnown RBP13.38□□□□□ -0.27
DDR1-232ENST00000418800 ADD1P35611 737 aaKnown RBP13.38□□□□□ -0.27
DDR1-232ENST00000418800 MYL5Q02045 173 aa13.38□□□□□ -0.27
DDR1-232ENST00000418800 SLC20A2Q08357 652 aa13.38□□□□□ -0.27
DDR1-232ENST00000418800 STOX1Q6ZVD7 989 aa13.38□□□□□ -0.27
DDR1-232ENST00000418800 PACS2Q86VP3 889 aa13.38□□□□□ -0.27
DDR1-232ENST00000418800 GRAMD1CQ8IYS0 662 aa13.38□□□□□ -0.27
DDR1-232ENST00000418800 KCNG4Q8TDN1 519 aa13.38□□□□□ -0.27
DDR1-232ENST00000418800 PPM1EQ8WY54 764 aa13.38□□□□□ -0.27
DDR1-232ENST00000418800 MTMR7Q9Y216 660 aa13.38□□□□□ -0.27
DDR1-232ENST00000418800 CPS1P31327 1500 aa13.38□□□□□ -0.27
DDR1-232ENST00000418800 MYO3AQ8NEV4 1616 aa13.38□□□□□ -0.27
DDR1-232ENST00000418800 PSDA5PKW4 1024 aaPredicted RBP13.38□□□□□ -0.27
DDR1-232ENST00000418800 E7EWF7 191 aa13.38□□□□□ -0.27
DDR1-232ENST00000418800 TNNI3KQ59H18 835 aa13.38□□□□□ -0.27
DDR1-232ENST00000418800 CCDC102BQ68D86 513 aa13.38□□□□□ -0.27
DDR1-232ENST00000418800 HDXQ7Z353 690 aa13.38□□□□□ -0.27
DDR1-232ENST00000418800 ANKRD20A12PQ8NF67 263 aa13.38□□□□□ -0.27
DDR1-232ENST00000418800 HOOK1Q9UJC3 728 aaKnown RBP13.38□□□□□ -0.27
DDR1-232ENST00000418800 FPGT-TNNI3KV9GXZ4 949 aa13.38□□□□□ -0.27
DDR1-232ENST00000418800 CDK12Q9NYV4 1490 aaPredicted RBP13.38□□□□□ -0.27
DDR1-232ENST00000418800 NRXN1Q9ULB1 1477 aa13.38□□□□□ -0.27
DDR1-232ENST00000418800 IMMTQ16891 758 aaKnown RBP13.37□□□□□ -0.27
DDR1-232ENST00000418800 ADALQ6DHV7 355 aa13.37□□□□□ -0.27
DDR1-232ENST00000418800 SARM1Q6SZW1 724 aa13.37□□□□□ -0.27
DDR1-232ENST00000418800 NBPF11Q86T75 865 aa13.37□□□□□ -0.27
DDR1-232ENST00000418800 CAPZA3Q96KX2 299 aa13.37□□□□□ -0.27
DDR1-232ENST00000418800 CRACR2AQ9BSW2 395 aa13.37□□□□□ -0.27
DDR1-232ENST00000418800 ZBTB3Q9H5J0 574 aa13.37□□□□□ -0.27
DDR1-232ENST00000418800 FAM204AQ9H8W3 233 aa13.37□□□□□ -0.27
DDR1-232ENST00000418800 PTPRMP28827 1452 aa13.37□□□□□ -0.27
DDR1-232ENST00000418800 EPB41L2O43491 1005 aaKnown RBP13.37□□□□□ -0.27
DDR1-232ENST00000418800 PDIA3P30101 505 aaKnown RBP13.37□□□□□ -0.27
DDR1-232ENST00000418800 RDXP35241 583 aaKnown RBP13.37□□□□□ -0.27
DDR1-232ENST00000418800 NLRP12P59046 1061 aa13.37□□□□□ -0.27
DDR1-232ENST00000418800 CT47A1Q5JQC4 288 aaPredicted RBP13.37□□□□□ -0.27
DDR1-232ENST00000418800 TTC39AQ5SRH9 613 aa13.37□□□□□ -0.27
DDR1-232ENST00000418800 EXOC4Q96A65 974 aa13.37□□□□□ -0.27
DDR1-232ENST00000418800 L2HGDHQ9H9P8 463 aa13.37□□□□□ -0.27
DDR1-232ENST00000418800 PAG1Q9NWQ8 432 aa13.37□□□□□ -0.27
DDR1-232ENST00000418800 NFE2L3Q9Y4A8 694 aa13.37□□□□□ -0.27
DDR1-232ENST00000418800 KIAA1210Q9ULL0 1709 aa13.37□□□□□ -0.27
DDR1-232ENST00000418800 SETBP1Q9Y6X0 1596 aa13.37□□□□□ -0.27
DDR1-232ENST00000418800 ATP7BP35670 1465 aa13.37□□□□□ -0.27
DDR1-232ENST00000418800 DNA2P51530 1060 aa13.37□□□□□ -0.27
DDR1-232ENST00000418800 ANO1Q5XXA6 986 aa13.37□□□□□ -0.27
DDR1-232ENST00000418800 ANKRD13DQ6ZTN6 518 aa13.37□□□□□ -0.27
DDR1-232ENST00000418800 CMTR1Q8N1G2 835 aaKnown RBP13.37□□□□□ -0.27
DDR1-232ENST00000418800 THEMISQ8N1K5 641 aaPredicted RBP13.37□□□□□ -0.27
DDR1-232ENST00000418800 JMYQ8N9B5 988 aa13.37□□□□□ -0.27
DDR1-232ENST00000418800 IMPACTQ9P2X3 320 aa13.37□□□□□ -0.27
DDR1-232ENST00000418800 HMGB1P09429 215 aaKnown RBP13.36□□□□□ -0.27
DDR1-232ENST00000418800 MATR3P43243 847 aaKnown RBP eCLIP13.36□□□□□ -0.27
DDR1-232ENST00000418800 MTF1Q14872 753 aa13.36□□□□□ -0.27
DDR1-232ENST00000418800 MYSM1Q5VVJ2 828 aa13.36□□□□□ -0.27
DDR1-232ENST00000418800 NOC3LQ8WTT2 800 aaKnown RBP13.36□□□□□ -0.27
DDR1-232ENST00000418800 POLD4Q9HCU8 107 aa13.36□□□□□ -0.27
DDR1-232ENST00000418800 MYO5BQ9ULV0 1848 aa13.36□□□□□ -0.27
DDR1-232ENST00000418800 ALDH1L1O75891 902 aa13.36□□□□□ -0.27
DDR1-232ENST00000418800 ECM2O94769 699 aaPredicted RBP13.36□□□□□ -0.27
DDR1-232ENST00000418800 MAP2K2P36507 400 aa13.36□□□□□ -0.27
DDR1-232ENST00000418800 SAFBQ15424 915 aaKnown RBP eCLIP13.36□□□□□ -0.27
DDR1-232ENST00000418800 NFATC2IPQ8NCF5 419 aa13.36□□□□□ -0.27
DDR1-232ENST00000418800 RAPGEF4Q8WZA2 1011 aa13.36□□□□□ -0.27
DDR1-232ENST00000418800 SLC26A6Q9BXS9 759 aa13.36□□□□□ -0.27
DDR1-232ENST00000418800 ABCB6Q9NP58 842 aa13.36□□□□□ -0.27
DDR1-232ENST00000418800 CCT6AP40227 531 aaKnown RBP13.36□□□□□ -0.27
DDR1-232ENST00000418800 CCT5P48643 541 aa13.36□□□□□ -0.27
DDR1-232ENST00000418800 RNF187Q5TA31 235 aaPredicted RBP13.36□□□□□ -0.27
DDR1-232ENST00000418800 TOGARAM2Q6ZUX3 1019 aa13.36□□□□□ -0.27
DDR1-232ENST00000418800 GIMAP7Q8NHV1 300 aa13.36□□□□□ -0.27
DDR1-232ENST00000418800 EEF2KMTQ96G04 330 aa13.36□□□□□ -0.27
DDR1-232ENST00000418800 NEURL4Q96JN8 1562 aa13.36□□□□□ -0.27
DDR1-232ENST00000418800 IFT172Q9UG01 1749 aa13.35□□□□□ -0.27
DDR1-232ENST00000418800 ERBB3P21860 1342 aa13.35□□□□□ -0.27
DDR1-232ENST00000418800 ZNF213O14771 459 aa13.35□□□□□ -0.27
DDR1-232ENST00000418800 FOXN1O15353 648 aa13.35□□□□□ -0.27
DDR1-232ENST00000418800 PFKFB2O60825 505 aa13.35□□□□□ -0.27
DDR1-232ENST00000418800 MAPK8IP1Q9UQF2 711 aa13.35□□□□□ -0.27
DDR1-232ENST00000418800 PCDHA5Q9Y5H7 936 aa13.35□□□□□ -0.27
DDR1-232ENST00000418800 ZRANB2O95218 330 aaKnown RBP eCLIP13.35□□□□□ -0.27
DDR1-232ENST00000418800 SSBP05455 408 aaKnown RBP eCLIP13.35□□□□□ -0.27
DDR1-232ENST00000418800 NAA16Q6N069 864 aaPredicted RBP13.35□□□□□ -0.27
DDR1-232ENST00000418800 TEX2Q8IWB9 1127 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms