RNA–Protein interactions for RNA: ENST00000418713.5

RPUSD3-202, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-202ENST00000418713 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.27■■□□□ 1.48
RPUSD3-202ENST00000418713 SPDYE2BA6NHP3 402 aa24.26■■□□□ 1.47
RPUSD3-202ENST00000418713 APBB1O00213 710 aa24.26■■□□□ 1.47
RPUSD3-202ENST00000418713 SPDYE6P0CI01 402 aa24.26■■□□□ 1.47
RPUSD3-202ENST00000418713 CRKP46108 304 aa24.26■■□□□ 1.47
RPUSD3-202ENST00000418713 ERICH6Q7L0X2 663 aa24.26■■□□□ 1.47
RPUSD3-202ENST00000418713 GLIS2Q9BZE0 524 aaPredicted RBP24.26■■□□□ 1.47
RPUSD3-202ENST00000418713 IL1RAPL2Q9NP60 686 aa24.26■■□□□ 1.47
RPUSD3-202ENST00000418713 ZNF646O15015 1829 aaPredicted RBP24.26■■□□□ 1.47
RPUSD3-202ENST00000418713 TNFAIP1Q13829 316 aa24.25■■□□□ 1.47
RPUSD3-202ENST00000418713 RWDD1Q9H446 243 aaPredicted RBP24.25■■□□□ 1.47
RPUSD3-202ENST00000418713 HMG20BQ9P0W2 317 aa24.25■■□□□ 1.47
RPUSD3-202ENST00000418713 ABCF2Q9UG63 623 aa24.25■■□□□ 1.47
RPUSD3-202ENST00000418713 DBNLQ9UJU6 430 aaKnown RBP24.25■■□□□ 1.47
RPUSD3-202ENST00000418713 PCDHB15Q9Y5E8 787 aa24.25■■□□□ 1.47
RPUSD3-202ENST00000418713 TMOD2Q9NZR1 351 aa24.24■■□□□ 1.47
RPUSD3-202ENST00000418713 LDHCP07864 332 aa24.23■■□□□ 1.47
RPUSD3-202ENST00000418713 NF2P35240 595 aa24.23■■□□□ 1.47
RPUSD3-202ENST00000418713 GSTO1P78417 241 aa24.23■■□□□ 1.47
RPUSD3-202ENST00000418713 DZIP1Q86YF9 867 aaKnown RBP24.23■■□□□ 1.47
RPUSD3-202ENST00000418713 GCC1Q96CN9 775 aa24.23■■□□□ 1.47
RPUSD3-202ENST00000418713 PRMT6Q96LA8 375 aaPredicted RBP24.23■■□□□ 1.47
RPUSD3-202ENST00000418713 ZDHHC15Q96MV8 337 aa24.23■■□□□ 1.47
RPUSD3-202ENST00000418713 PPP2R3BQ9Y5P8 575 aa24.23■■□□□ 1.47
RPUSD3-202ENST00000418713 TNNI2P48788 182 aa24.22■■□□□ 1.47
RPUSD3-202ENST00000418713 HDAC1Q13547 482 aaPredicted RBP24.22■■□□□ 1.47
RPUSD3-202ENST00000418713 TMED8Q6PL24 325 aaPredicted RBP24.22■■□□□ 1.47
RPUSD3-202ENST00000418713 LRP2BPQ9P2M1 347 aa24.22■■□□□ 1.47
RPUSD3-202ENST00000418713 CELF2O95319 508 aaKnown RBP24.21■■□□□ 1.47
RPUSD3-202ENST00000418713 MCAMP43121 646 aa24.21■■□□□ 1.47
RPUSD3-202ENST00000418713 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.21■■□□□ 1.47
RPUSD3-202ENST00000418713 POLR2AP24928 1970 aaKnown RBP24.21■■□□□ 1.47
RPUSD3-202ENST00000418713 PRDX5P30044 214 aa24.2■■□□□ 1.46
RPUSD3-202ENST00000418713 C2orf69Q8N8R5 385 aa24.2■■□□□ 1.46
RPUSD3-202ENST00000418713 GPATCH3Q96I76 525 aa24.2■■□□□ 1.46
RPUSD3-202ENST00000418713 TRAF5O00463 557 aa24.19■■□□□ 1.46
RPUSD3-202ENST00000418713 TTF1Q15361 905 aaPredicted RBP24.19■■□□□ 1.46
RPUSD3-202ENST00000418713 SPDYE2Q495Y8 402 aa24.19■■□□□ 1.46
RPUSD3-202ENST00000418713 EXOC6Q8TAG9 804 aa24.19■■□□□ 1.46
RPUSD3-202ENST00000418713 VEZTQ9HBM0 779 aa24.19■■□□□ 1.46
RPUSD3-202ENST00000418713 RAI14Q9P0K7 980 aa24.19■■□□□ 1.46
RPUSD3-202ENST00000418713 COL1A1P02452 1464 aaPredicted RBP24.19■■□□□ 1.46
RPUSD3-202ENST00000418713 FKBP1BP68106 108 aa24.18■■□□□ 1.46
RPUSD3-202ENST00000418713 SUPT20HL1Q3ZLR7 823 aa24.18■■□□□ 1.46
RPUSD3-202ENST00000418713 FAM163AQ96GL9 167 aaPredicted RBP24.18■■□□□ 1.46
RPUSD3-202ENST00000418713 ZNF408Q9H9D4 720 aa24.18■■□□□ 1.46
RPUSD3-202ENST00000418713 ZNF70Q9UC06 446 aaPredicted RBP24.18■■□□□ 1.46
RPUSD3-202ENST00000418713 ABT1Q9ULW3 272 aaKnown RBP24.18■■□□□ 1.46
RPUSD3-202ENST00000418713 TRPM7Q96QT4 1865 aa24.17■■□□□ 1.46
RPUSD3-202ENST00000418713 ASTN2O75129 1339 aaPredicted RBP24.17■■□□□ 1.46
RPUSD3-202ENST00000418713 ADM5C9JUS6 153 aa24.17■■□□□ 1.46
RPUSD3-202ENST00000418713 MAP4K4O95819 1239 aaPredicted RBP24.17■■□□□ 1.46
RPUSD3-202ENST00000418713 GRIK5Q16478 980 aa24.17■■□□□ 1.46
RPUSD3-202ENST00000418713 FKBP1CQ5VVH2 108 aa24.17■■□□□ 1.46
RPUSD3-202ENST00000418713 CDCA5Q96FF9 252 aa24.17■■□□□ 1.46
RPUSD3-202ENST00000418713 NOL10Q9BSC4 688 aaKnown RBP24.17■■□□□ 1.46
RPUSD3-202ENST00000418713 BCL11AQ9H165 835 aa24.17■■□□□ 1.46
RPUSD3-202ENST00000418713 DEFB129Q9H1M3 183 aa24.17■■□□□ 1.46
RPUSD3-202ENST00000418713 TDRD3Q9H7E2 651 aaKnown RBP24.17■■□□□ 1.46
RPUSD3-202ENST00000418713 TLR7Q9NYK1 1049 aaKnown RBP24.17■■□□□ 1.46
RPUSD3-202ENST00000418713 SNRKQ9NRH2 765 aa24.16■■□□□ 1.46
RPUSD3-202ENST00000418713 CLRN2A0PK11 232 aa24.15■■□□□ 1.46
RPUSD3-202ENST00000418713 CST9Q5W186 159 aa24.15■■□□□ 1.46
RPUSD3-202ENST00000418713 APOBEC3HQ6NTF7 200 aaKnown RBP24.15■■□□□ 1.46
RPUSD3-202ENST00000418713 HOOK2Q96ED9 719 aa24.15■■□□□ 1.46
RPUSD3-202ENST00000418713 HHIPL1Q96JK4 782 aa24.15■■□□□ 1.46
RPUSD3-202ENST00000418713 GBA2Q9HCG7 927 aaPredicted RBP24.15■■□□□ 1.46
RPUSD3-202ENST00000418713 BAG3O95817 575 aa24.14■■□□□ 1.45
RPUSD3-202ENST00000418713 ATP5JP18859 108 aa24.14■■□□□ 1.45
RPUSD3-202ENST00000418713 MECOMQ03112 1051 aa24.14■■□□□ 1.45
RPUSD3-202ENST00000418713 MAP3K12Q12852 859 aa24.14■■□□□ 1.45
RPUSD3-202ENST00000418713 DEFB115Q30KQ5 88 aa24.14■■□□□ 1.45
RPUSD3-202ENST00000418713 TBC1D9Q6ZT07 1266 aa24.14■■□□□ 1.45
RPUSD3-202ENST00000418713 DAGLAQ9Y4D2 1042 aa24.14■■□□□ 1.45
RPUSD3-202ENST00000418713 TLL2Q9Y6L7 1015 aa24.14■■□□□ 1.45
RPUSD3-202ENST00000418713 CEP350Q5VT06 3117 aa24.13■■□□□ 1.45
RPUSD3-202ENST00000418713 ECM29Q5VYK3 1845 aa24.13■■□□□ 1.45
RPUSD3-202ENST00000418713 CYP2E1P05181 493 aaPredicted RBP24.13■■□□□ 1.45
RPUSD3-202ENST00000418713 ECE1P42892 770 aa24.13■■□□□ 1.45
RPUSD3-202ENST00000418713 ZAP70P43403 619 aa24.13■■□□□ 1.45
RPUSD3-202ENST00000418713 DIXDC1Q155Q3 683 aa24.13■■□□□ 1.45
RPUSD3-202ENST00000418713 PI16Q6UXB8 463 aa24.13■■□□□ 1.45
RPUSD3-202ENST00000418713 FAM83AQ86UY5 434 aa24.13■■□□□ 1.45
RPUSD3-202ENST00000418713 CERS3Q8IU89 383 aa24.13■■□□□ 1.45
RPUSD3-202ENST00000418713 NSUN4Q96CB9 384 aaKnown RBP24.13■■□□□ 1.45
RPUSD3-202ENST00000418713 PCDHAC2Q9Y5I4 1007 aa24.13■■□□□ 1.45
RPUSD3-202ENST00000418713 GAKO14976 1311 aa24.12■■□□□ 1.45
RPUSD3-202ENST00000418713 SMARCA5O60264 1052 aaPredicted RBP24.12■■□□□ 1.45
RPUSD3-202ENST00000418713 RASA3Q14644 834 aa24.12■■□□□ 1.45
RPUSD3-202ENST00000418713 NAA16Q6N069 864 aaPredicted RBP24.12■■□□□ 1.45
RPUSD3-202ENST00000418713 ARMC9Q7Z3E5 817 aa24.12■■□□□ 1.45
RPUSD3-202ENST00000418713 KLRG1Q96E93 195 aa24.12■■□□□ 1.45
RPUSD3-202ENST00000418713 ECHDC1Q9NTX5 307 aa24.12■■□□□ 1.45
RPUSD3-202ENST00000418713 USP40Q9NVE5 1235 aa24.12■■□□□ 1.45
RPUSD3-202ENST00000418713 RASSF10A6NK89 507 aa24.11■■□□□ 1.45
RPUSD3-202ENST00000418713 ERC2O15083 957 aa24.11■■□□□ 1.45
RPUSD3-202ENST00000418713 PPP1R12BO60237 982 aaPredicted RBP24.11■■□□□ 1.45
RPUSD3-202ENST00000418713 CENPBP07199 599 aaPredicted RBP24.11■■□□□ 1.45
RPUSD3-202ENST00000418713 PLCG2P16885 1265 aa24.11■■□□□ 1.45
RPUSD3-202ENST00000418713 ANKRD45Q5TZF3 282 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms