RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 CA12O43570 354 aa20.43■□□□□ 0.86
LINC00404-201ENST00000418660 SPDYE2Q495Y8 402 aa20.43■□□□□ 0.86
LINC00404-201ENST00000418660 ARMC9Q7Z3E5 817 aa20.43■□□□□ 0.86
LINC00404-201ENST00000418660 TNS4Q8IZW8 715 aa20.43■□□□□ 0.86
LINC00404-201ENST00000418660 ZNF70Q9UC06 446 aaPredicted RBP20.43■□□□□ 0.86
LINC00404-201ENST00000418660 PNMA6EA0A0J9YXQ4 647 aa20.42■□□□□ 0.86
LINC00404-201ENST00000418660 ZBTB22O15209 634 aa20.42■□□□□ 0.86
LINC00404-201ENST00000418660 RLBP1P12271 317 aa20.42■□□□□ 0.86
LINC00404-201ENST00000418660 KIF23Q02241 960 aaPredicted RBP20.42■□□□□ 0.86
LINC00404-201ENST00000418660 RASAL3Q86YV0 1011 aa20.42■□□□□ 0.86
LINC00404-201ENST00000418660 ITPRIPQ8IWB1 547 aa20.42■□□□□ 0.86
LINC00404-201ENST00000418660 TEKT1Q969V4 418 aa20.42■□□□□ 0.86
LINC00404-201ENST00000418660 TDRD3Q9H7E2 651 aaKnown RBP20.42■□□□□ 0.86
LINC00404-201ENST00000418660 AKAP2Q9Y2D5 859 aa20.42■□□□□ 0.86
LINC00404-201ENST00000418660 MAST3O60307 1309 aa20.42■□□□□ 0.86
LINC00404-201ENST00000418660 SEMA3EO15041 775 aa20.41■□□□□ 0.86
LINC00404-201ENST00000418660 ZBTB7BO15156 539 aaPredicted RBP20.41■□□□□ 0.86
LINC00404-201ENST00000418660 TFCP2Q12800 502 aa20.41■□□□□ 0.86
LINC00404-201ENST00000418660 TNFAIP1Q13829 316 aa20.41■□□□□ 0.86
LINC00404-201ENST00000418660 RASA3Q14644 834 aa20.41■□□□□ 0.86
LINC00404-201ENST00000418660 SUPT20HL1Q3ZLR7 823 aa20.41■□□□□ 0.86
LINC00404-201ENST00000418660 PHKA1P46020 1223 aa20.4■□□□□ 0.86
LINC00404-201ENST00000418660 TIMM10P62072 90 aa20.4■□□□□ 0.86
LINC00404-201ENST00000418660 PRKG1Q13976 671 aa20.4■□□□□ 0.86
LINC00404-201ENST00000418660 CCDC102BQ68D86 513 aa20.4■□□□□ 0.86
LINC00404-201ENST00000418660 DENND2AQ9ULE3 1009 aa20.4■□□□□ 0.86
LINC00404-201ENST00000418660 A0A1B0GUL7 405 aa20.39■□□□□ 0.85
LINC00404-201ENST00000418660 ADORA1P30542 326 aa20.39■□□□□ 0.85
LINC00404-201ENST00000418660 ATP8B2P98198 1209 aa20.39■□□□□ 0.85
LINC00404-201ENST00000418660 G3BP1Q13283 466 aaKnown RBP eCLIP20.39■□□□□ 0.85
LINC00404-201ENST00000418660 POLA2Q14181 598 aa20.39■□□□□ 0.85
LINC00404-201ENST00000418660 LDLRAD1Q5T700 205 aa20.39■□□□□ 0.85
LINC00404-201ENST00000418660 HHIPL2Q6UWX4 724 aa20.39■□□□□ 0.85
LINC00404-201ENST00000418660 REM2Q8IYK8 340 aaPredicted RBP20.39■□□□□ 0.85
LINC00404-201ENST00000418660 ZDHHC15Q96MV8 337 aa20.39■□□□□ 0.85
LINC00404-201ENST00000418660 ANGEL1Q9UNK9 670 aaKnown RBP20.39■□□□□ 0.85
LINC00404-201ENST00000418660 PPP1R12BO60237 982 aaPredicted RBP20.38■□□□□ 0.85
LINC00404-201ENST00000418660 MS4A1P11836 297 aa20.38■□□□□ 0.85
LINC00404-201ENST00000418660 MAP3K11Q16584 847 aa20.38■□□□□ 0.85
LINC00404-201ENST00000418660 NBPF12Q5TAG4 269 aaPredicted RBP20.38■□□□□ 0.85
LINC00404-201ENST00000418660 SALL1Q9NSC2 1324 aa20.37■□□□□ 0.85
LINC00404-201ENST00000418660 TNNI2P48788 182 aa20.37■□□□□ 0.85
LINC00404-201ENST00000418660 MVPQ14764 893 aaKnown RBP20.37■□□□□ 0.85
LINC00404-201ENST00000418660 SSH3Q8TE77 659 aa20.37■□□□□ 0.85
LINC00404-201ENST00000418660 XAGE2Q96GT9 111 aa20.37■□□□□ 0.85
LINC00404-201ENST00000418660 CSRNP1Q96S65 589 aa20.37■□□□□ 0.85
LINC00404-201ENST00000418660 C1orf115Q9H7X2 142 aa20.37■□□□□ 0.85
LINC00404-201ENST00000418660 TSKSQ9UJT2 592 aa20.37■□□□□ 0.85
LINC00404-201ENST00000418660 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.37■□□□□ 0.85
LINC00404-201ENST00000418660 SSC5DA1L4H1 1573 aa20.37■□□□□ 0.85
LINC00404-201ENST00000418660 MYH13Q9UKX3 1938 aa20.36■□□□□ 0.85
LINC00404-201ENST00000418660 TCP10L2B9ZVM9 353 aa20.36■□□□□ 0.85
LINC00404-201ENST00000418660 APOBEC3HQ6NTF7 200 aaKnown RBP20.36■□□□□ 0.85
LINC00404-201ENST00000418660 PANK1Q8TE04 598 aa20.36■□□□□ 0.85
LINC00404-201ENST00000418660 NEUROD6Q96NK8 337 aa20.36■□□□□ 0.85
LINC00404-201ENST00000418660 FZD1Q9UP38 647 aa20.36■□□□□ 0.85
LINC00404-201ENST00000418660 UNCXA6NJT0 531 aa20.35■□□□□ 0.85
LINC00404-201ENST00000418660 LDHBP07195 334 aaKnown RBP20.35■□□□□ 0.85
LINC00404-201ENST00000418660 PRDX5P30044 214 aa20.35■□□□□ 0.85
LINC00404-201ENST00000418660 TEPSINQ96N21 525 aa20.35■□□□□ 0.85
LINC00404-201ENST00000418660 SAGE1Q9NXZ1 904 aa20.35■□□□□ 0.85
LINC00404-201ENST00000418660 PDS5AQ29RF7 1337 aaKnown RBP20.34■□□□□ 0.85
LINC00404-201ENST00000418660 FKBP1CQ5VVH2 108 aa20.34■□□□□ 0.85
LINC00404-201ENST00000418660 ZGPATQ8N5A5 531 aaKnown RBP20.34■□□□□ 0.85
LINC00404-201ENST00000418660 TMOD2Q9NZR1 351 aa20.34■□□□□ 0.85
LINC00404-201ENST00000418660 USP2O75604 605 aaPredicted RBP20.33■□□□□ 0.85
LINC00404-201ENST00000418660 IREB2P48200 963 aaKnown RBP20.33■□□□□ 0.85
LINC00404-201ENST00000418660 RASGRF1Q13972 1273 aa20.33■□□□□ 0.85
LINC00404-201ENST00000418660 SLC10A4Q96EP9 437 aa20.33■□□□□ 0.85
LINC00404-201ENST00000418660 TMEM39BQ9GZU3 492 aa20.33■□□□□ 0.85
LINC00404-201ENST00000418660 RNF186Q9NXI6 227 aa20.33■□□□□ 0.85
LINC00404-201ENST00000418660 RCAN3Q9UKA8 241 aa20.33■□□□□ 0.85
LINC00404-201ENST00000418660 SURF6O75683 361 aaKnown RBP20.32■□□□□ 0.84
LINC00404-201ENST00000418660 CACNB3P54284 484 aa20.32■□□□□ 0.84
LINC00404-201ENST00000418660 OS9Q13438 667 aaPredicted RBP20.32■□□□□ 0.84
LINC00404-201ENST00000418660 DIXDC1Q155Q3 683 aa20.32■□□□□ 0.84
LINC00404-201ENST00000418660 GORABQ5T7V8 394 aa20.32■□□□□ 0.84
LINC00404-201ENST00000418660 FAM83AQ86UY5 434 aa20.32■□□□□ 0.84
LINC00404-201ENST00000418660 GPR108Q9NPR9 543 aa20.32■□□□□ 0.84
LINC00404-201ENST00000418660 NOP58Q9Y2X3 529 aaKnown RBP20.32■□□□□ 0.84
LINC00404-201ENST00000418660 DAGLAQ9Y4D2 1042 aa20.32■□□□□ 0.84
LINC00404-201ENST00000418660 TRPA1O75762 1119 aa20.31■□□□□ 0.84
LINC00404-201ENST00000418660 SPRYD7Q5W111 196 aa20.31■□□□□ 0.84
LINC00404-201ENST00000418660 CDAN1Q8IWY9 1227 aa20.31■□□□□ 0.84
LINC00404-201ENST00000418660 TM4SF4P48230 202 aa20.3■□□□□ 0.84
LINC00404-201ENST00000418660 MKRN3Q13064 507 aaKnown RBP20.3■□□□□ 0.84
LINC00404-201ENST00000418660 SPTY2D1Q68D10 685 aaPredicted RBP20.3■□□□□ 0.84
LINC00404-201ENST00000418660 CEP85Q6P2H3 762 aa20.3■□□□□ 0.84
LINC00404-201ENST00000418660 ANKRD13AQ8IZ07 590 aa20.3■□□□□ 0.84
LINC00404-201ENST00000418660 CLMNQ96JQ2 1002 aa20.3■□□□□ 0.84
LINC00404-201ENST00000418660 ABCF2Q9UG63 623 aa20.3■□□□□ 0.84
LINC00404-201ENST00000418660 TNNI3KQ59H18 835 aa20.29■□□□□ 0.84
LINC00404-201ENST00000418660 CDC42EP5Q6NZY7 148 aa20.29■□□□□ 0.84
LINC00404-201ENST00000418660 HMG20BQ9P0W2 317 aa20.29■□□□□ 0.84
LINC00404-201ENST00000418660 FPGT-TNNI3KV9GXZ4 949 aa20.29■□□□□ 0.84
LINC00404-201ENST00000418660 UQCRFS1P1P0C7P4 283 aa20.28■□□□□ 0.84
LINC00404-201ENST00000418660 ZBTB48P10074 688 aaPredicted RBP20.28■□□□□ 0.84
LINC00404-201ENST00000418660 ARID4AP29374 1257 aaPredicted RBP20.28■□□□□ 0.84
LINC00404-201ENST00000418660 SREBF2Q12772 1141 aa20.28■□□□□ 0.84
LINC00404-201ENST00000418660 SLF2Q8IX21 1173 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms