RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 C2orf72A6NCS6 295 aa13.03□□□□□ -0.32
RFC1-203ENST00000418436 H7C1D1 291 aa13.03□□□□□ -0.32
RFC1-203ENST00000418436 SASH1O94885 1247 aa13.03□□□□□ -0.32
RFC1-203ENST00000418436 ZNF280AP59817 542 aaPredicted RBP13.03□□□□□ -0.32
RFC1-203ENST00000418436 GTF2IP78347 998 aa13.03□□□□□ -0.32
RFC1-203ENST00000418436 RPAP2Q8IXW5 612 aaPredicted RBP13.03□□□□□ -0.32
RFC1-203ENST00000418436 FAM205AQ6ZU69 1335 aa13.03□□□□□ -0.32
RFC1-203ENST00000418436 MYO3BQ8WXR4 1341 aa13.03□□□□□ -0.32
RFC1-203ENST00000418436 MYH13Q9UKX3 1938 aa13.03□□□□□ -0.32
RFC1-203ENST00000418436 SLC5A1P13866 664 aa13.02□□□□□ -0.33
RFC1-203ENST00000418436 HIRAP54198 1017 aaPredicted RBP13.02□□□□□ -0.33
RFC1-203ENST00000418436 EMP3P54852 163 aa13.02□□□□□ -0.33
RFC1-203ENST00000418436 FKBP1AP62942 108 aaKnown RBP13.02□□□□□ -0.33
RFC1-203ENST00000418436 TFCP2Q12800 502 aa13.02□□□□□ -0.33
RFC1-203ENST00000418436 G3BP1Q13283 466 aaKnown RBP eCLIP13.02□□□□□ -0.33
RFC1-203ENST00000418436 ATP2B3Q16720 1220 aa13.02□□□□□ -0.33
RFC1-203ENST00000418436 EAPPQ56P03 285 aaPredicted RBP13.02□□□□□ -0.33
RFC1-203ENST00000418436 CAVIN4Q5BKX8 364 aa13.02□□□□□ -0.33
RFC1-203ENST00000418436 MXD3Q9BW11 206 aa13.02□□□□□ -0.33
RFC1-203ENST00000418436 PGAP2Q9UHJ9 254 aa13.02□□□□□ -0.33
RFC1-203ENST00000418436 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.02□□□□□ -0.33
RFC1-203ENST00000418436 SURF6O75683 361 aaKnown RBP13.01□□□□□ -0.33
RFC1-203ENST00000418436 USP17L8P0C7I0 530 aa13.01□□□□□ -0.33
RFC1-203ENST00000418436 MMP14P50281 582 aa13.01□□□□□ -0.33
RFC1-203ENST00000418436 BCAMP50895 628 aa13.01□□□□□ -0.33
RFC1-203ENST00000418436 SIRT2Q8IXJ6 389 aa13.01□□□□□ -0.33
RFC1-203ENST00000418436 CERS5Q8N5B7 392 aa13.01□□□□□ -0.33
RFC1-203ENST00000418436 TRPM4Q8TD43 1214 aa13.01□□□□□ -0.33
RFC1-203ENST00000418436 ZSWIM6Q9HCJ5 1215 aa13.01□□□□□ -0.33
RFC1-203ENST00000418436 AKAP2Q9Y2D5 859 aa13.01□□□□□ -0.33
RFC1-203ENST00000418436 ITGBL1O95965 494 aaPredicted RBP13□□□□□ -0.33
RFC1-203ENST00000418436 EGFRP00533 1210 aa13□□□□□ -0.33
RFC1-203ENST00000418436 HOXB1P14653 301 aaPredicted RBP13□□□□□ -0.33
RFC1-203ENST00000418436 SAMD7Q7Z3H4 446 aa13□□□□□ -0.33
RFC1-203ENST00000418436 VPS37DQ86XT2 251 aa13□□□□□ -0.33
RFC1-203ENST00000418436 ZC3H15Q8WU90 426 aaKnown RBP13□□□□□ -0.33
RFC1-203ENST00000418436 FBXW7Q969H0 707 aa13□□□□□ -0.33
RFC1-203ENST00000418436 GPR108Q9NPR9 543 aa13□□□□□ -0.33
RFC1-203ENST00000418436 POLR2AP24928 1970 aaKnown RBP13□□□□□ -0.33
RFC1-203ENST00000418436 A0A1B0GUL7 405 aa12.99□□□□□ -0.33
RFC1-203ENST00000418436 TIMM10P62072 90 aa12.99□□□□□ -0.33
RFC1-203ENST00000418436 TBC1D10BQ4KMP7 808 aaPredicted RBP12.99□□□□□ -0.33
RFC1-203ENST00000418436 TMC2Q8TDI7 906 aa12.99□□□□□ -0.33
RFC1-203ENST00000418436 PASKQ96RG2 1323 aa12.98□□□□□ -0.33
RFC1-203ENST00000418436 HMMRO75330 724 aa12.98□□□□□ -0.33
RFC1-203ENST00000418436 HSPA6P17066 643 aa12.98□□□□□ -0.33
RFC1-203ENST00000418436 ADORA1P30542 326 aa12.98□□□□□ -0.33
RFC1-203ENST00000418436 KIF4BQ2VIQ3 1234 aa12.98□□□□□ -0.33
RFC1-203ENST00000418436 MAP1SQ66K74 1059 aaPredicted RBP12.98□□□□□ -0.33
RFC1-203ENST00000418436 KIAA0825Q8IV33 1275 aa12.98□□□□□ -0.33
RFC1-203ENST00000418436 CDAN1Q8IWY9 1227 aa12.98□□□□□ -0.33
RFC1-203ENST00000418436 CNTROBQ8N137 903 aa12.98□□□□□ -0.33
RFC1-203ENST00000418436 XAGE2Q96GT9 111 aa12.98□□□□□ -0.33
RFC1-203ENST00000418436 MYOZ2Q9NPC6 264 aa12.98□□□□□ -0.33
RFC1-203ENST00000418436 IQSEC3Q9UPP2 1182 aaPredicted RBP12.98□□□□□ -0.33
RFC1-203ENST00000418436 GTPBP6O43824 516 aaPredicted RBP12.97□□□□□ -0.33
RFC1-203ENST00000418436 PHKA1P46020 1223 aa12.97□□□□□ -0.33
RFC1-203ENST00000418436 MFSD14BQ5SR56 506 aa12.97□□□□□ -0.33
RFC1-203ENST00000418436 RBM26Q5T8P6 1007 aaKnown RBP12.97□□□□□ -0.33
RFC1-203ENST00000418436 CCDC102BQ68D86 513 aa12.97□□□□□ -0.33
RFC1-203ENST00000418436 OGFOD1Q8N543 542 aa12.97□□□□□ -0.33
RFC1-203ENST00000418436 TBC1D22AQ8WUA7 517 aa12.97□□□□□ -0.33
RFC1-203ENST00000418436 ZBED3Q96IU2 234 aaPredicted RBP12.97□□□□□ -0.33
RFC1-203ENST00000418436 GNL3LQ9NVN8 582 aaKnown RBP12.97□□□□□ -0.33
RFC1-203ENST00000418436 JAG2Q9Y219 1238 aa12.97□□□□□ -0.33
RFC1-203ENST00000418436 TRPM7Q96QT4 1865 aa12.97□□□□□ -0.33
RFC1-203ENST00000418436 ECM29Q5VYK3 1845 aa12.97□□□□□ -0.33
RFC1-203ENST00000418436 COL1A1P02452 1464 aaPredicted RBP12.97□□□□□ -0.33
RFC1-203ENST00000418436 SEMA3EO15041 775 aa12.96□□□□□ -0.33
RFC1-203ENST00000418436 OS9Q13438 667 aaPredicted RBP12.96□□□□□ -0.33
RFC1-203ENST00000418436 HSP90AB4PQ58FF6 505 aa12.96□□□□□ -0.33
RFC1-203ENST00000418436 TNNI3KQ59H18 835 aa12.96□□□□□ -0.33
RFC1-203ENST00000418436 ERC1Q8IUD2 1116 aa12.96□□□□□ -0.33
RFC1-203ENST00000418436 MTMR14Q8NCE2 650 aa12.96□□□□□ -0.33
RFC1-203ENST00000418436 NEUROD6Q96NK8 337 aa12.96□□□□□ -0.33
RFC1-203ENST00000418436 CRBNQ96SW2 442 aa12.96□□□□□ -0.33
RFC1-203ENST00000418436 HDAC9Q9UKV0 1011 aa12.96□□□□□ -0.33
RFC1-203ENST00000418436 EXOC6BQ9Y2D4 811 aa12.96□□□□□ -0.33
RFC1-203ENST00000418436 FPGT-TNNI3KV9GXZ4 949 aa12.96□□□□□ -0.33
RFC1-203ENST00000418436 FRAT2O75474 233 aaPredicted RBP12.95□□□□□ -0.34
RFC1-203ENST00000418436 APLP1P51693 650 aa12.95□□□□□ -0.34
RFC1-203ENST00000418436 CHAF1AQ13111 956 aaPredicted RBP12.95□□□□□ -0.34
RFC1-203ENST00000418436 SCARF1Q14162 830 aa12.95□□□□□ -0.34
RFC1-203ENST00000418436 GRIK5Q16478 980 aa12.95□□□□□ -0.34
RFC1-203ENST00000418436 DENND2AQ9ULE3 1009 aa12.95□□□□□ -0.34
RFC1-203ENST00000418436 SUGT1Q9Y2Z0 365 aa12.95□□□□□ -0.34
RFC1-203ENST00000418436 ASTN2O75129 1339 aaPredicted RBP12.94□□□□□ -0.34
RFC1-203ENST00000418436 PDS5AQ29RF7 1337 aaKnown RBP12.94□□□□□ -0.34
RFC1-203ENST00000418436 SALL1Q9NSC2 1324 aa12.94□□□□□ -0.34
RFC1-203ENST00000418436 AKAP11Q9UKA4 1901 aa12.94□□□□□ -0.34
RFC1-203ENST00000418436 WNT10BO00744 389 aa12.94□□□□□ -0.34
RFC1-203ENST00000418436 NBPF9Q3BBW0 867 aa12.94□□□□□ -0.34
RFC1-203ENST00000418436 CDC37L1Q7L3B6 337 aa12.94□□□□□ -0.34
RFC1-203ENST00000418436 WDR66Q8TBY9 1149 aa12.94□□□□□ -0.34
RFC1-203ENST00000418436 RHPN1Q8TCX5 695 aa12.94□□□□□ -0.34
RFC1-203ENST00000418436 EAF2Q96CJ1 260 aaPredicted RBP12.94□□□□□ -0.34
RFC1-203ENST00000418436 TTF2Q9UNY4 1162 aaKnown RBP12.94□□□□□ -0.34
RFC1-203ENST00000418436 SUPT16HQ9Y5B9 1047 aaKnown RBP12.94□□□□□ -0.34
RFC1-203ENST00000418436 PCDHB15Q9Y5E8 787 aa12.94□□□□□ -0.34
RFC1-203ENST00000418436 PITPNM2Q9BZ72 1349 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms