RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 PPP1R7Q15435 360 aa12.64□□□□□ -0.39
PTCH1-205ENST00000418258 GEN1Q17RS7 908 aa12.64□□□□□ -0.39
PTCH1-205ENST00000418258 FCHSD1Q86WN1 690 aa12.64□□□□□ -0.39
PTCH1-205ENST00000418258 DUOX2Q9NRD8 1548 aa12.64□□□□□ -0.39
PTCH1-205ENST00000418258 STX10O60499 249 aa12.64□□□□□ -0.39
PTCH1-205ENST00000418258 SPAG1Q07617 926 aa12.64□□□□□ -0.39
PTCH1-205ENST00000418258 CWF19L2Q2TBE0 894 aaKnown RBP12.64□□□□□ -0.39
PTCH1-205ENST00000418258 EIF2AK4Q9P2K8 1649 aaKnown RBP12.64□□□□□ -0.39
PTCH1-205ENST00000418258 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.64□□□□□ -0.39
PTCH1-205ENST00000418258 MYCLP12524 364 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-205ENST00000418258 IFT74Q96LB3 600 aa12.64□□□□□ -0.39
PTCH1-205ENST00000418258 HCLS1P14317 486 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-205ENST00000418258 RAPGEF1Q13905 1077 aa12.64□□□□□ -0.39
PTCH1-205ENST00000418258 CCDC25Q86WR0 208 aa12.64□□□□□ -0.39
PTCH1-205ENST00000418258 STMN4Q9H169 189 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-205ENST00000418258 KIFAP3Q92845 792 aa12.63□□□□□ -0.39
PTCH1-205ENST00000418258 EPB41P11171 864 aaKnown RBP12.63□□□□□ -0.39
PTCH1-205ENST00000418258 PDE1AP54750 535 aa12.63□□□□□ -0.39
PTCH1-205ENST00000418258 GABPAQ06546 454 aa12.63□□□□□ -0.39
PTCH1-205ENST00000418258 APOBRQ0VD83 1088 aa12.63□□□□□ -0.39
PTCH1-205ENST00000418258 STRN3Q13033 797 aa12.63□□□□□ -0.39
PTCH1-205ENST00000418258 LARGE2Q8N3Y3 721 aa12.63□□□□□ -0.39
PTCH1-205ENST00000418258 AOPEPQ8N6M6 819 aa12.63□□□□□ -0.39
PTCH1-205ENST00000418258 CFAP57Q96MR6 1250 aa12.63□□□□□ -0.39
PTCH1-205ENST00000418258 ESYT1Q9BSJ8 1104 aa12.63□□□□□ -0.39
PTCH1-205ENST00000418258 MAP3K5Q99683 1374 aa12.63□□□□□ -0.39
PTCH1-205ENST00000418258 CRCPO75575 148 aa12.63□□□□□ -0.39
PTCH1-205ENST00000418258 EIF4A2Q14240 407 aaKnown RBP12.63□□□□□ -0.39
PTCH1-205ENST00000418258 DCAF5Q96JK2 942 aa12.63□□□□□ -0.39
PTCH1-205ENST00000418258 GGA1Q9UJY5 639 aa12.63□□□□□ -0.39
PTCH1-205ENST00000418258 E7EVH7 732 aa12.63□□□□□ -0.39
PTCH1-205ENST00000418258 DAPK3O43293 454 aa12.63□□□□□ -0.39
PTCH1-205ENST00000418258 CDAN1Q8IWY9 1227 aa12.63□□□□□ -0.39
PTCH1-205ENST00000418258 URB2Q14146 1524 aaKnown RBP12.63□□□□□ -0.39
PTCH1-205ENST00000418258 SPTLC2O15270 562 aa12.63□□□□□ -0.39
PTCH1-205ENST00000418258 LETM2Q2VYF4 491 aa12.63□□□□□ -0.39
PTCH1-205ENST00000418258 RPL13P26373 211 aaKnown RBP12.62□□□□□ -0.39
PTCH1-205ENST00000418258 CCT6BQ92526 530 aa12.62□□□□□ -0.39
PTCH1-205ENST00000418258 CCDC42Q96M95 316 aa12.62□□□□□ -0.39
PTCH1-205ENST00000418258 LPXNO60711 386 aa12.62□□□□□ -0.39
PTCH1-205ENST00000418258 TRPC3Q13507 836 aa12.62□□□□□ -0.39
PTCH1-205ENST00000418258 SMIM23A6NLE4 172 aa12.62□□□□□ -0.39
PTCH1-205ENST00000418258 KRT83P78385 493 aa12.62□□□□□ -0.39
PTCH1-205ENST00000418258 TCIRG1Q13488 830 aa12.62□□□□□ -0.39
PTCH1-205ENST00000418258 ZSCAN23Q3MJ62 389 aa12.62□□□□□ -0.39
PTCH1-205ENST00000418258 CFAP157Q5JU67 520 aa12.62□□□□□ -0.39
PTCH1-205ENST00000418258 DPP8Q6V1X1 898 aaPredicted RBP12.62□□□□□ -0.39
PTCH1-205ENST00000418258 PAXBP1Q9Y5B6 917 aa12.62□□□□□ -0.39
PTCH1-205ENST00000418258 M0QZ92 97 aa12.62□□□□□ -0.39
PTCH1-205ENST00000418258 KRT86O43790 486 aa12.62□□□□□ -0.39
PTCH1-205ENST00000418258 ATP8B2P98198 1209 aa12.62□□□□□ -0.39
PTCH1-205ENST00000418258 ANKS4BQ8N8V4 417 aa12.62□□□□□ -0.39
PTCH1-205ENST00000418258 CAPZA3Q96KX2 299 aa12.62□□□□□ -0.39
PTCH1-205ENST00000418258 C11orf95C9JLR9 678 aaPredicted RBP12.61□□□□□ -0.39
PTCH1-205ENST00000418258 HOOK2Q96ED9 719 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 PRDM10Q9NQV6 1147 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 VWA3AA6NCI4 1184 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 SYT1P21579 422 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 SV2BQ7L1I2 683 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 MAEAQ7L5Y9 396 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 UNC13AQ9UPW8 1703 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 CCT6AP40227 531 aaKnown RBP12.61□□□□□ -0.39
PTCH1-205ENST00000418258 STX17P56962 302 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 TCP10Q12799 353 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 USP48Q86UV5 1035 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 C8orf58Q8NAV2 365 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 JAKMIP2Q96AA8 810 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 SELENOSQ9BQE4 189 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 DDX39AO00148 427 aaKnown RBP12.61□□□□□ -0.39
PTCH1-205ENST00000418258 EP400NLQ6ZTU2 488 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 SMC6Q96SB8 1091 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 ANAPC4Q9UJX5 808 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 HIBADHP31937 336 aaKnown RBP12.61□□□□□ -0.39
PTCH1-205ENST00000418258 FAM98CQ17RN3 349 aaKnown RBP12.61□□□□□ -0.39
PTCH1-205ENST00000418258 FAM89AQ96GI7 184 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 ZFP91Q96JP5 570 aaPredicted RBP12.61□□□□□ -0.39
PTCH1-205ENST00000418258 NPATQ14207 1427 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 CCDC171Q6TFL3 1326 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 A2MP01023 1474 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 FLT4P35916 1363 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 CTAGE15A4D2H0 777 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 MBD4O95243 580 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 CTAGE8P0CG41 777 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 DNM1Q05193 864 aaKnown RBP12.61□□□□□ -0.39
PTCH1-205ENST00000418258 MTHFSDQ2M296 383 aaKnown RBP12.61□□□□□ -0.39
PTCH1-205ENST00000418258 CTAGE6Q86UF2 777 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 CTAGE4Q8IX94 777 aa12.61□□□□□ -0.39
PTCH1-205ENST00000418258 USH1GQ495M9 461 aa12.6□□□□□ -0.39
PTCH1-205ENST00000418258 SMCR8Q8TEV9 937 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-205ENST00000418258 GCP02774 474 aa12.6□□□□□ -0.39
PTCH1-205ENST00000418258 GTF2F1P35269 517 aaKnown RBP eCLIP12.6□□□□□ -0.39
PTCH1-205ENST00000418258 TPD52P55327 224 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-205ENST00000418258 LINS1Q8NG48 757 aa12.6□□□□□ -0.39
PTCH1-205ENST00000418258 GMNNO75496 209 aa12.6□□□□□ -0.39
PTCH1-205ENST00000418258 PFDN4Q9NQP4 134 aa12.6□□□□□ -0.39
PTCH1-205ENST00000418258 SYCP2Q9BX26 1530 aa12.6□□□□□ -0.39
PTCH1-205ENST00000418258 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-205ENST00000418258 IGHDP01880 384 aa12.6□□□□□ -0.39
PTCH1-205ENST00000418258 GPR162Q16538 588 aa12.6□□□□□ -0.39
PTCH1-205ENST00000418258 PPANQ9NQ55 473 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 890.2 ms