RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 CSADQ9Y600 493 aa11.96□□□□□ -0.49
LINC01238-201ENST00000416204 LAMA3Q16787 3333 aa11.95□□□□□ -0.5
LINC01238-201ENST00000416204 UNCXA6NJT0 531 aa11.95□□□□□ -0.5
LINC01238-201ENST00000416204 BTBD19C9JJ37 291 aa11.95□□□□□ -0.5
LINC01238-201ENST00000416204 CTGFP29279 349 aa11.95□□□□□ -0.5
LINC01238-201ENST00000416204 LACTBP83111 547 aaPredicted RBP11.95□□□□□ -0.5
LINC01238-201ENST00000416204 CALD1Q05682 793 aaKnown RBP11.95□□□□□ -0.5
LINC01238-201ENST00000416204 IFIT5Q13325 482 aaKnown RBP11.95□□□□□ -0.5
LINC01238-201ENST00000416204 ARHGEF6Q15052 776 aa11.95□□□□□ -0.5
LINC01238-201ENST00000416204 MFSD14BQ5SR56 506 aa11.95□□□□□ -0.5
LINC01238-201ENST00000416204 DZIP1LQ8IYY4 767 aaKnown RBP11.95□□□□□ -0.5
LINC01238-201ENST00000416204 SLC17A8Q8NDX2 589 aa11.95□□□□□ -0.5
LINC01238-201ENST00000416204 ZKSCAN4Q969J2 545 aaPredicted RBP11.95□□□□□ -0.5
LINC01238-201ENST00000416204 CPA4Q9UI42 421 aa11.95□□□□□ -0.5
LINC01238-201ENST00000416204 ECM29Q5VYK3 1845 aa11.95□□□□□ -0.5
LINC01238-201ENST00000416204 FOXO4P98177 505 aa11.94□□□□□ -0.5
LINC01238-201ENST00000416204 FLIIQ13045 1269 aa11.94□□□□□ -0.5
LINC01238-201ENST00000416204 CHAF1AQ13111 956 aaPredicted RBP11.94□□□□□ -0.5
LINC01238-201ENST00000416204 FKBP5Q13451 457 aaPredicted RBP11.94□□□□□ -0.5
LINC01238-201ENST00000416204 TNFAIP1Q13829 316 aa11.94□□□□□ -0.5
LINC01238-201ENST00000416204 KIF22Q14807 665 aa11.94□□□□□ -0.5
LINC01238-201ENST00000416204 EPHA10Q5JZY3 1008 aa11.94□□□□□ -0.5
LINC01238-201ENST00000416204 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.94□□□□□ -0.5
LINC01238-201ENST00000416204 SNCAIPQ9Y6H5 919 aa11.94□□□□□ -0.5
LINC01238-201ENST00000416204 LAMB1P07942 1786 aa11.94□□□□□ -0.5
LINC01238-201ENST00000416204 F6X3S4 739 aa11.93□□□□□ -0.5
LINC01238-201ENST00000416204 IRF6O14896 467 aa11.93□□□□□ -0.5
LINC01238-201ENST00000416204 TLR2O60603 784 aa11.93□□□□□ -0.5
LINC01238-201ENST00000416204 CRKP46108 304 aa11.93□□□□□ -0.5
LINC01238-201ENST00000416204 TWISTNBQ3B726 338 aaPredicted RBP11.93□□□□□ -0.5
LINC01238-201ENST00000416204 TAF7LQ5H9L4 462 aa11.93□□□□□ -0.5
LINC01238-201ENST00000416204 LMBR1LQ6UX01 489 aa11.93□□□□□ -0.5
LINC01238-201ENST00000416204 C15orf52Q6ZUT6 534 aaKnown RBP11.93□□□□□ -0.5
LINC01238-201ENST00000416204 DNAAF4Q8WXU2 420 aa11.93□□□□□ -0.5
LINC01238-201ENST00000416204 TRIM47Q96LD4 638 aa11.93□□□□□ -0.5
LINC01238-201ENST00000416204 WRNIP1Q96S55 665 aa11.93□□□□□ -0.5
LINC01238-201ENST00000416204 MYH16Q9H6N6 1097 aa11.93□□□□□ -0.5
LINC01238-201ENST00000416204 CNNM1Q9NRU3 951 aa11.93□□□□□ -0.5
LINC01238-201ENST00000416204 BIN2Q9UBW5 565 aaPredicted RBP11.93□□□□□ -0.5
LINC01238-201ENST00000416204 SPDYE5A6NIY4 337 aa11.92□□□□□ -0.5
LINC01238-201ENST00000416204 CETPP11597 493 aa11.92□□□□□ -0.5
LINC01238-201ENST00000416204 PSMC4P43686 418 aa11.92□□□□□ -0.5
LINC01238-201ENST00000416204 FKBP1AP62942 108 aaKnown RBP11.92□□□□□ -0.5
LINC01238-201ENST00000416204 LDHAL6AQ6ZMR3 332 aa11.92□□□□□ -0.5
LINC01238-201ENST00000416204 SERPINA10Q9UK55 444 aa11.92□□□□□ -0.5
LINC01238-201ENST00000416204 FAM205AQ6ZU69 1335 aa11.91□□□□□ -0.5
LINC01238-201ENST00000416204 SOX1O00570 391 aaPredicted RBP11.91□□□□□ -0.5
LINC01238-201ENST00000416204 WDHD1O75717 1129 aaPredicted RBP11.91□□□□□ -0.5
LINC01238-201ENST00000416204 FMNL1O95466 1100 aaPredicted RBP11.91□□□□□ -0.5
LINC01238-201ENST00000416204 CCL5P13501 91 aa11.91□□□□□ -0.5
LINC01238-201ENST00000416204 OSBPP22059 807 aa11.91□□□□□ -0.5
LINC01238-201ENST00000416204 SNAPC2Q13487 334 aa11.91□□□□□ -0.5
LINC01238-201ENST00000416204 MIGA2Q7L4E1 593 aa11.91□□□□□ -0.5
LINC01238-201ENST00000416204 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.91□□□□□ -0.5
LINC01238-201ENST00000416204 LINS1Q8NG48 757 aa11.91□□□□□ -0.5
LINC01238-201ENST00000416204 RAET1EQ8TD07 263 aa11.91□□□□□ -0.5
LINC01238-201ENST00000416204 LRCH3Q96II8 777 aa11.91□□□□□ -0.5
LINC01238-201ENST00000416204 PUS3Q9BZE2 481 aaKnown RBP11.91□□□□□ -0.5
LINC01238-201ENST00000416204 A0A1B0GUL6 1792 aa11.91□□□□□ -0.5
LINC01238-201ENST00000416204 HIBADHP31937 336 aaKnown RBP11.9□□□□□ -0.5
LINC01238-201ENST00000416204 INPP5BP32019 993 aa11.9□□□□□ -0.5
LINC01238-201ENST00000416204 TNNI2P48788 182 aa11.9□□□□□ -0.5
LINC01238-201ENST00000416204 CCDC57Q2TAC2 916 aa11.9□□□□□ -0.5
LINC01238-201ENST00000416204 ERO1BQ86YB8 467 aa11.9□□□□□ -0.5
LINC01238-201ENST00000416204 TDRD7Q8NHU6 1098 aaKnown RBP11.9□□□□□ -0.5
LINC01238-201ENST00000416204 FAM84BQ96KN1 310 aaPredicted RBP11.9□□□□□ -0.5
LINC01238-201ENST00000416204 RNF208Q9H0X6 261 aa11.9□□□□□ -0.5
LINC01238-201ENST00000416204 SRRDQ9UH36 339 aa11.9□□□□□ -0.5
LINC01238-201ENST00000416204 RIPOR2Q9Y4F9 1068 aa11.9□□□□□ -0.5
LINC01238-201ENST00000416204 MYPNQ86TC9 1320 aa11.89□□□□□ -0.51
LINC01238-201ENST00000416204 PDHXO00330 501 aa11.89□□□□□ -0.51
LINC01238-201ENST00000416204 GRK4P32298 578 aa11.89□□□□□ -0.51
LINC01238-201ENST00000416204 C17orf99Q6UX52 265 aa11.89□□□□□ -0.51
LINC01238-201ENST00000416204 CHMP4AQ9BY43 222 aa11.89□□□□□ -0.51
LINC01238-201ENST00000416204 UNC93B1Q9H1C4 597 aa11.89□□□□□ -0.51
LINC01238-201ENST00000416204 ARAP2Q8WZ64 1704 aa11.89□□□□□ -0.51
LINC01238-201ENST00000416204 ZBTB7BO15156 539 aaPredicted RBP11.88□□□□□ -0.51
LINC01238-201ENST00000416204 FRAT2O75474 233 aaPredicted RBP11.88□□□□□ -0.51
LINC01238-201ENST00000416204 GJA8P48165 433 aa11.88□□□□□ -0.51
LINC01238-201ENST00000416204 PRKCZQ05513 592 aa11.88□□□□□ -0.51
LINC01238-201ENST00000416204 PPIL2Q13356 520 aa11.88□□□□□ -0.51
LINC01238-201ENST00000416204 VPS37DQ86XT2 251 aa11.88□□□□□ -0.51
LINC01238-201ENST00000416204 STAP2Q9UGK3 403 aa11.88□□□□□ -0.51
LINC01238-201ENST00000416204 GABRQQ9UN88 632 aa11.88□□□□□ -0.51
LINC01238-201ENST00000416204 FARP2O94887 1054 aaPredicted RBP11.87□□□□□ -0.51
LINC01238-201ENST00000416204 CYP2C8P10632 490 aa11.87□□□□□ -0.51
LINC01238-201ENST00000416204 BEND3Q5T5X7 828 aa11.87□□□□□ -0.51
LINC01238-201ENST00000416204 UBE2Q1Q7Z7E8 422 aa11.87□□□□□ -0.51
LINC01238-201ENST00000416204 U2AF1L4Q8WU68 220 aaKnown RBP11.87□□□□□ -0.51
LINC01238-201ENST00000416204 TEKT1Q969V4 418 aa11.87□□□□□ -0.51
LINC01238-201ENST00000416204 HTATIP2Q9BUP3 242 aa11.87□□□□□ -0.51
LINC01238-201ENST00000416204 PRO3102Q9H379 93 aa11.87□□□□□ -0.51
LINC01238-201ENST00000416204 SPINK5Q9NQ38 1064 aaPredicted RBP11.87□□□□□ -0.51
LINC01238-201ENST00000416204 SALL2Q9Y467 1007 aaPredicted RBP11.87□□□□□ -0.51
LINC01238-201ENST00000416204 GJB1P08034 283 aa11.86□□□□□ -0.51
LINC01238-201ENST00000416204 ELNP15502 786 aa11.86□□□□□ -0.51
LINC01238-201ENST00000416204 PRMT2P55345 433 aa11.86□□□□□ -0.51
LINC01238-201ENST00000416204 TCP10Q12799 353 aa11.86□□□□□ -0.51
LINC01238-201ENST00000416204 NKX2-3Q8TAU0 364 aa11.86□□□□□ -0.51
LINC01238-201ENST00000416204 PRKRIP1Q9H875 184 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms