RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 ELP3Q9H9T3 547 aa19.5■□□□□ 0.71
DDX56-202ENST00000415758 C9orf78Q9NZ63 289 aaPredicted RBP19.5■□□□□ 0.71
DDX56-202ENST00000415758 ARAP2Q8WZ64 1704 aa19.49■□□□□ 0.71
DDX56-202ENST00000415758 CRKP46108 304 aa19.48■□□□□ 0.71
DDX56-202ENST00000415758 MAP3K9P80192 1104 aa19.48■□□□□ 0.71
DDX56-202ENST00000415758 HDLBPQ00341 1268 aaKnown RBP19.48■□□□□ 0.71
DDX56-202ENST00000415758 CDAN1Q8IWY9 1227 aa19.48■□□□□ 0.71
DDX56-202ENST00000415758 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.48■□□□□ 0.71
DDX56-202ENST00000415758 BRI3BPQ8WY22 251 aa19.48■□□□□ 0.71
DDX56-202ENST00000415758 KAZALD1Q96I82 304 aa19.48■□□□□ 0.71
DDX56-202ENST00000415758 RIPOR2Q9Y4F9 1068 aa19.48■□□□□ 0.71
DDX56-202ENST00000415758 TNNI2P48788 182 aa19.47■□□□□ 0.71
DDX56-202ENST00000415758 GTF2A2P52657 109 aa19.47■□□□□ 0.71
DDX56-202ENST00000415758 VGLL4Q14135 290 aa19.47■□□□□ 0.71
DDX56-202ENST00000415758 ARHGEF6Q15052 776 aa19.47■□□□□ 0.71
DDX56-202ENST00000415758 HABP4Q5JVS0 413 aaKnown RBP19.47■□□□□ 0.71
DDX56-202ENST00000415758 FBXO33Q7Z6M2 555 aa19.47■□□□□ 0.71
DDX56-202ENST00000415758 PUS3Q9BZE2 481 aaKnown RBP19.47■□□□□ 0.71
DDX56-202ENST00000415758 SRCIN1Q9C0H9 1055 aa19.47■□□□□ 0.71
DDX56-202ENST00000415758 SPINK5Q9NQ38 1064 aaPredicted RBP19.47■□□□□ 0.71
DDX56-202ENST00000415758 MROH5Q6ZUA9 1318 aa19.47■□□□□ 0.71
DDX56-202ENST00000415758 TCP10L2B9ZVM9 353 aa19.46■□□□□ 0.71
DDX56-202ENST00000415758 EN2P19622 333 aaPredicted RBP19.46■□□□□ 0.71
DDX56-202ENST00000415758 ZNF333Q96JL9 665 aa19.46■□□□□ 0.71
DDX56-202ENST00000415758 MRIQ9BWK5 157 aa19.46■□□□□ 0.71
DDX56-202ENST00000415758 TMEM39BQ9GZU3 492 aa19.46■□□□□ 0.71
DDX56-202ENST00000415758 ZFYVE28Q9HCC9 887 aa19.46■□□□□ 0.71
DDX56-202ENST00000415758 UTYO14607 1347 aa19.46■□□□□ 0.71
DDX56-202ENST00000415758 CCL15-CCL14A0A0B4J2E2 113 aa19.45■□□□□ 0.7
DDX56-202ENST00000415758 TAF1CQ15572 869 aaPredicted RBP19.45■□□□□ 0.7
DDX56-202ENST00000415758 CCL15Q16663 113 aa19.45■□□□□ 0.7
DDX56-202ENST00000415758 CNKSR2Q8WXI2 1034 aa19.45■□□□□ 0.7
DDX56-202ENST00000415758 SALL2Q9Y467 1007 aaPredicted RBP19.45■□□□□ 0.7
DDX56-202ENST00000415758 CSADQ9Y600 493 aa19.45■□□□□ 0.7
DDX56-202ENST00000415758 GRIK5Q16478 980 aa19.44■□□□□ 0.7
DDX56-202ENST00000415758 RABL6Q3YEC7 729 aaPredicted RBP19.44■□□□□ 0.7
DDX56-202ENST00000415758 NBPF11Q86T75 865 aa19.44■□□□□ 0.7
DDX56-202ENST00000415758 TBC1D22AQ8WUA7 517 aa19.44■□□□□ 0.7
DDX56-202ENST00000415758 SUCLG2Q96I99 432 aa19.44■□□□□ 0.7
DDX56-202ENST00000415758 TMEM106CQ9BVX2 250 aa19.44■□□□□ 0.7
DDX56-202ENST00000415758 MRS2Q9HD23 443 aa19.44■□□□□ 0.7
DDX56-202ENST00000415758 ZCCHC17Q9NP64 241 aaKnown RBP19.44■□□□□ 0.7
DDX56-202ENST00000415758 SPDYE5A6NIY4 337 aa19.43■□□□□ 0.7
DDX56-202ENST00000415758 NBPF7P0C2Y1 421 aaPredicted RBP19.43■□□□□ 0.7
DDX56-202ENST00000415758 SLC4A10Q6U841 1118 aa19.43■□□□□ 0.7
DDX56-202ENST00000415758 FAM43AQ8N2R8 423 aa19.43■□□□□ 0.7
DDX56-202ENST00000415758 FKBP1CQ5VVH2 108 aa19.42■□□□□ 0.7
DDX56-202ENST00000415758 FAM83AQ86UY5 434 aa19.42■□□□□ 0.7
DDX56-202ENST00000415758 VPS37DQ86XT2 251 aa19.42■□□□□ 0.7
DDX56-202ENST00000415758 TEKT1Q969V4 418 aa19.42■□□□□ 0.7
DDX56-202ENST00000415758 OTUD5Q96G74 571 aa19.42■□□□□ 0.7
DDX56-202ENST00000415758 ZDHHC15Q96MV8 337 aa19.42■□□□□ 0.7
DDX56-202ENST00000415758 TLR2O60603 784 aa19.41■□□□□ 0.7
DDX56-202ENST00000415758 CETPP11597 493 aa19.41■□□□□ 0.7
DDX56-202ENST00000415758 SLC9C1Q4G0N8 1177 aa19.41■□□□□ 0.7
DDX56-202ENST00000415758 CAVIN4Q5BKX8 364 aa19.41■□□□□ 0.7
DDX56-202ENST00000415758 ERO1BQ86YB8 467 aa19.41■□□□□ 0.7
DDX56-202ENST00000415758 VGLL2Q8N8G2 317 aa19.41■□□□□ 0.7
DDX56-202ENST00000415758 SUGT1Q9Y2Z0 365 aa19.41■□□□□ 0.7
DDX56-202ENST00000415758 PTCH2Q9Y6C5 1203 aa19.41■□□□□ 0.7
DDX56-202ENST00000415758 SNCAIPQ9Y6H5 919 aa19.41■□□□□ 0.7
DDX56-202ENST00000415758 WDHD1O75717 1129 aaPredicted RBP19.4■□□□□ 0.7
DDX56-202ENST00000415758 PDE8BO95263 885 aa19.4■□□□□ 0.7
DDX56-202ENST00000415758 LRRC24Q50LG9 513 aa19.4■□□□□ 0.7
DDX56-202ENST00000415758 HOOK2Q96ED9 719 aa19.4■□□□□ 0.7
DDX56-202ENST00000415758 IQSEC3Q9UPP2 1182 aaPredicted RBP19.4■□□□□ 0.7
DDX56-202ENST00000415758 GNRH1P01148 92 aa19.39■□□□□ 0.69
DDX56-202ENST00000415758 APOBEC3HQ6NTF7 200 aaKnown RBP19.39■□□□□ 0.69
DDX56-202ENST00000415758 BICC1Q9H694 974 aaKnown RBP19.39■□□□□ 0.69
DDX56-202ENST00000415758 KIF16BQ96L93 1317 aa19.39■□□□□ 0.69
DDX56-202ENST00000415758 BTBD19C9JJ37 291 aa19.38■□□□□ 0.69
DDX56-202ENST00000415758 IRF6O14896 467 aa19.38■□□□□ 0.69
DDX56-202ENST00000415758 MAST3O60307 1309 aa19.38■□□□□ 0.69
DDX56-202ENST00000415758 FRAT2O75474 233 aaPredicted RBP19.38■□□□□ 0.69
DDX56-202ENST00000415758 CACNB3P54284 484 aa19.38■□□□□ 0.69
DDX56-202ENST00000415758 LACTBP83111 547 aaPredicted RBP19.38■□□□□ 0.69
DDX56-202ENST00000415758 CHAF1AQ13111 956 aaPredicted RBP19.38■□□□□ 0.69
DDX56-202ENST00000415758 METTL24Q5JXM2 366 aa19.38■□□□□ 0.69
DDX56-202ENST00000415758 HHIPL2Q6UWX4 724 aa19.38■□□□□ 0.69
DDX56-202ENST00000415758 ANKRD44Q8N8A2 993 aa19.38■□□□□ 0.69
DDX56-202ENST00000415758 WRNIP1Q96S55 665 aa19.38■□□□□ 0.69
DDX56-202ENST00000415758 RPAP1Q9BWH6 1393 aaPredicted RBP19.37■□□□□ 0.69
DDX56-202ENST00000415758 BCAMP50895 628 aa19.37■□□□□ 0.69
DDX56-202ENST00000415758 PRMT2P55345 433 aa19.37■□□□□ 0.69
DDX56-202ENST00000415758 PPIL2Q13356 520 aa19.37■□□□□ 0.69
DDX56-202ENST00000415758 SNAPC2Q13487 334 aa19.37■□□□□ 0.69
DDX56-202ENST00000415758 ZKSCAN4Q969J2 545 aaPredicted RBP19.37■□□□□ 0.69
DDX56-202ENST00000415758 TMOD2Q9NZR1 351 aa19.37■□□□□ 0.69
DDX56-202ENST00000415758 FGFR2P21802 821 aa19.36■□□□□ 0.69
DDX56-202ENST00000415758 PPATQ06203 517 aa19.36■□□□□ 0.69
DDX56-202ENST00000415758 KIF22Q14807 665 aa19.36■□□□□ 0.69
DDX56-202ENST00000415758 SLC4A8Q2Y0W8 1093 aa19.36■□□□□ 0.69
DDX56-202ENST00000415758 DCAF15Q66K64 600 aa19.36■□□□□ 0.69
DDX56-202ENST00000415758 FXR1P51114 621 aaKnown RBP eCLIP19.35■□□□□ 0.69
DDX56-202ENST00000415758 ARHGAP39Q9C0H5 1083 aa19.35■□□□□ 0.69
DDX56-202ENST00000415758 C17orf99Q6UX52 265 aa19.34■□□□□ 0.69
DDX56-202ENST00000415758 ZNF341Q9BYN7 854 aa19.34■□□□□ 0.69
DDX56-202ENST00000415758 ZNF112Q9UJU3 913 aa19.34■□□□□ 0.69
DDX56-202ENST00000415758 ZSWIM8A7E2V4 1837 aa19.33■□□□□ 0.69
DDX56-202ENST00000415758 IFIT1P09914 478 aaKnown RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms