RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 CRKP46108 304 aa15.64■□□□□ 0.09
NCKIPSD-203ENST00000415281 SLC10A4Q96EP9 437 aa15.64■□□□□ 0.09
NCKIPSD-203ENST00000415281 METTL24Q5JXM2 366 aa15.63■□□□□ 0.09
NCKIPSD-203ENST00000415281 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.63■□□□□ 0.09
NCKIPSD-203ENST00000415281 HPS5Q9UPZ3 1129 aa15.63■□□□□ 0.09
NCKIPSD-203ENST00000415281 BRCA2P51587 3418 aa15.62■□□□□ 0.09
NCKIPSD-203ENST00000415281 TESPA1A2RU30 521 aaPredicted RBP15.62■□□□□ 0.09
NCKIPSD-203ENST00000415281 UNCXA6NJT0 531 aa15.62■□□□□ 0.09
NCKIPSD-203ENST00000415281 EYA2O00167 538 aa15.62■□□□□ 0.09
NCKIPSD-203ENST00000415281 RBM5P52756 815 aaKnown RBP eCLIP15.62■□□□□ 0.09
NCKIPSD-203ENST00000415281 SUPT20HL1Q3ZLR7 823 aa15.62■□□□□ 0.09
NCKIPSD-203ENST00000415281 APOBEC3HQ6NTF7 200 aaKnown RBP15.62■□□□□ 0.09
NCKIPSD-203ENST00000415281 IFNL1Q8IU54 200 aa15.62■□□□□ 0.09
NCKIPSD-203ENST00000415281 CNKSR2Q8WXI2 1034 aa15.62■□□□□ 0.09
NCKIPSD-203ENST00000415281 MS4A4AQ96JQ5 239 aa15.62■□□□□ 0.09
NCKIPSD-203ENST00000415281 TMEM39BQ9GZU3 492 aa15.62■□□□□ 0.09
NCKIPSD-203ENST00000415281 NOB1Q9ULX3 412 aaKnown RBP15.62■□□□□ 0.09
NCKIPSD-203ENST00000415281 TCP10L2B9ZVM9 353 aa15.61■□□□□ 0.09
NCKIPSD-203ENST00000415281 PPP1R12BO60237 982 aaPredicted RBP15.61■□□□□ 0.09
NCKIPSD-203ENST00000415281 ZBTB48P10074 688 aaPredicted RBP15.61■□□□□ 0.09
NCKIPSD-203ENST00000415281 CACNB3P54284 484 aa15.61■□□□□ 0.09
NCKIPSD-203ENST00000415281 SOX10P56693 466 aa15.61■□□□□ 0.09
NCKIPSD-203ENST00000415281 HDLBPQ00341 1268 aaKnown RBP15.61■□□□□ 0.09
NCKIPSD-203ENST00000415281 SREBF2Q12772 1141 aa15.61■□□□□ 0.09
NCKIPSD-203ENST00000415281 CHAF1AQ13111 956 aaPredicted RBP15.61■□□□□ 0.09
NCKIPSD-203ENST00000415281 MRIQ9BWK5 157 aa15.61■□□□□ 0.09
NCKIPSD-203ENST00000415281 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.61■□□□□ 0.09
NCKIPSD-203ENST00000415281 MYH13Q9UKX3 1938 aa15.6■□□□□ 0.09
NCKIPSD-203ENST00000415281 MANSC4A6NHS7 340 aaPredicted RBP15.6■□□□□ 0.09
NCKIPSD-203ENST00000415281 MYO1BO43795 1136 aa15.6■□□□□ 0.09
NCKIPSD-203ENST00000415281 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.6■□□□□ 0.09
NCKIPSD-203ENST00000415281 KIF16BQ96L93 1317 aa15.6■□□□□ 0.09
NCKIPSD-203ENST00000415281 MKI67P46013 3256 aaKnown RBP15.6■□□□□ 0.09
NCKIPSD-203ENST00000415281 INHBEP58166 350 aa15.59■□□□□ 0.09
NCKIPSD-203ENST00000415281 ANKRD13AQ8IZ07 590 aa15.59■□□□□ 0.09
NCKIPSD-203ENST00000415281 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.59■□□□□ 0.09
NCKIPSD-203ENST00000415281 ZDHHC15Q96MV8 337 aa15.59■□□□□ 0.09
NCKIPSD-203ENST00000415281 ELP3Q9H9T3 547 aa15.59■□□□□ 0.09
NCKIPSD-203ENST00000415281 SMC4Q9NTJ3 1288 aa15.59■□□□□ 0.09
NCKIPSD-203ENST00000415281 TNNQ9UQP3 1299 aa15.59■□□□□ 0.09
NCKIPSD-203ENST00000415281 FKTNO75072 461 aa15.58■□□□□ 0.08
NCKIPSD-203ENST00000415281 RARSP54136 660 aaKnown RBP15.58■□□□□ 0.08
NCKIPSD-203ENST00000415281 PUM3Q15397 648 aaKnown RBP15.58■□□□□ 0.08
NCKIPSD-203ENST00000415281 CAVIN4Q5BKX8 364 aa15.58■□□□□ 0.08
NCKIPSD-203ENST00000415281 PA2G4Q9UQ80 394 aaKnown RBP15.58■□□□□ 0.08
NCKIPSD-203ENST00000415281 IREB2P48200 963 aaKnown RBP15.57■□□□□ 0.08
NCKIPSD-203ENST00000415281 VGLL4Q14135 290 aa15.57■□□□□ 0.08
NCKIPSD-203ENST00000415281 PKN2Q16513 984 aaKnown RBP15.57■□□□□ 0.08
NCKIPSD-203ENST00000415281 TBC1D22AQ8WUA7 517 aa15.57■□□□□ 0.08
NCKIPSD-203ENST00000415281 LPIN2Q92539 896 aa15.57■□□□□ 0.08
NCKIPSD-203ENST00000415281 OPTNQ96CV9 577 aa15.57■□□□□ 0.08
NCKIPSD-203ENST00000415281 MEIS3Q99687 375 aa15.57■□□□□ 0.08
NCKIPSD-203ENST00000415281 CIAO1O76071 339 aa15.56■□□□□ 0.08
NCKIPSD-203ENST00000415281 MAP3K9P80192 1104 aa15.56■□□□□ 0.08
NCKIPSD-203ENST00000415281 CRHR2Q13324 411 aa15.56■□□□□ 0.08
NCKIPSD-203ENST00000415281 FBXO46Q6PJ61 603 aaPredicted RBP15.56■□□□□ 0.08
NCKIPSD-203ENST00000415281 HHIPL2Q6UWX4 724 aa15.56■□□□□ 0.08
NCKIPSD-203ENST00000415281 VPS37DQ86XT2 251 aa15.56■□□□□ 0.08
NCKIPSD-203ENST00000415281 BRI3BPQ8WY22 251 aa15.56■□□□□ 0.08
NCKIPSD-203ENST00000415281 SIL1Q9H173 461 aa15.56■□□□□ 0.08
NCKIPSD-203ENST00000415281 LRRFIP2Q9Y608 721 aaKnown RBP15.56■□□□□ 0.08
NCKIPSD-203ENST00000415281 ZSWIM8A7E2V4 1837 aa15.55■□□□□ 0.08
NCKIPSD-203ENST00000415281 ZBTB22O15209 634 aa15.55■□□□□ 0.08
NCKIPSD-203ENST00000415281 ALDH1A1P00352 501 aa15.55■□□□□ 0.08
NCKIPSD-203ENST00000415281 IFIT1P09914 478 aaKnown RBP15.55■□□□□ 0.08
NCKIPSD-203ENST00000415281 CT47B1P0C2W7 299 aaPredicted RBP15.55■□□□□ 0.08
NCKIPSD-203ENST00000415281 TNFAIP1Q13829 316 aa15.55■□□□□ 0.08
NCKIPSD-203ENST00000415281 INTS3Q68E01 1043 aaKnown RBP15.55■□□□□ 0.08
NCKIPSD-203ENST00000415281 TEKT1Q969V4 418 aa15.55■□□□□ 0.08
NCKIPSD-203ENST00000415281 COPRSQ9NQ92 184 aa15.55■□□□□ 0.08
NCKIPSD-203ENST00000415281 SUGT1Q9Y2Z0 365 aa15.55■□□□□ 0.08
NCKIPSD-203ENST00000415281 SNCAIPQ9Y6H5 919 aa15.55■□□□□ 0.08
NCKIPSD-203ENST00000415281 UBTFL1P0CB47 393 aaPredicted RBP15.54■□□□□ 0.08
NCKIPSD-203ENST00000415281 PRDX5P30044 214 aa15.54■□□□□ 0.08
NCKIPSD-203ENST00000415281 ADORA1P30542 326 aa15.54■□□□□ 0.08
NCKIPSD-203ENST00000415281 PHKA1P46020 1223 aa15.54■□□□□ 0.08
NCKIPSD-203ENST00000415281 DIXDC1Q155Q3 683 aa15.54■□□□□ 0.08
NCKIPSD-203ENST00000415281 FKBP1CQ5VVH2 108 aa15.54■□□□□ 0.08
NCKIPSD-203ENST00000415281 OTOP1Q7RTM1 612 aa15.54■□□□□ 0.08
NCKIPSD-203ENST00000415281 FAM83AQ86UY5 434 aa15.54■□□□□ 0.08
NCKIPSD-203ENST00000415281 ZFPM1Q8IX07 1006 aa15.54■□□□□ 0.08
NCKIPSD-203ENST00000415281 FAM43AQ8N2R8 423 aa15.54■□□□□ 0.08
NCKIPSD-203ENST00000415281 FBXO3Q9UK99 471 aa15.54■□□□□ 0.08
NCKIPSD-203ENST00000415281 FRAT2O75474 233 aaPredicted RBP15.53■□□□□ 0.08
NCKIPSD-203ENST00000415281 NFIAQ12857 509 aa15.53■□□□□ 0.08
NCKIPSD-203ENST00000415281 CDC42EP5Q6NZY7 148 aa15.53■□□□□ 0.08
NCKIPSD-203ENST00000415281 ZKSCAN4Q969J2 545 aaPredicted RBP15.53■□□□□ 0.08
NCKIPSD-203ENST00000415281 FAM198AQ9UFP1 575 aa15.53■□□□□ 0.08
NCKIPSD-203ENST00000415281 DAGLAQ9Y4D2 1042 aa15.53■□□□□ 0.08
NCKIPSD-203ENST00000415281 SPDYE5A6NIY4 337 aa15.52■□□□□ 0.08
NCKIPSD-203ENST00000415281 SLC5A1P13866 664 aa15.52■□□□□ 0.08
NCKIPSD-203ENST00000415281 TNNI2P48788 182 aa15.52■□□□□ 0.08
NCKIPSD-203ENST00000415281 TIMM10P62072 90 aa15.52■□□□□ 0.08
NCKIPSD-203ENST00000415281 ATP2B3Q16720 1220 aa15.52■□□□□ 0.08
NCKIPSD-203ENST00000415281 CD99L2Q8TCZ2 262 aa15.52■□□□□ 0.08
NCKIPSD-203ENST00000415281 ZNF384Q8TF68 577 aa15.52■□□□□ 0.08
NCKIPSD-203ENST00000415281 ARHGAP45Q92619 1136 aa15.52■□□□□ 0.08
NCKIPSD-203ENST00000415281 API5Q9BZZ5 524 aaKnown RBP15.52■□□□□ 0.08
NCKIPSD-203ENST00000415281 MYH2Q9UKX2 1941 aa15.52■□□□□ 0.07
NCKIPSD-203ENST00000415281 SALL1Q9NSC2 1324 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms