RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 REC8O95072 547 aa18.65■□□□□ 0.58
SHMT2-202ENST00000414700 PTH1RQ03431 593 aa18.65■□□□□ 0.58
SHMT2-202ENST00000414700 MFSD14BQ5SR56 506 aa18.65■□□□□ 0.58
SHMT2-202ENST00000414700 PODNQ7Z5L7 613 aa18.65■□□□□ 0.58
SHMT2-202ENST00000414700 APPBP2Q92624 585 aa18.65■□□□□ 0.58
SHMT2-202ENST00000414700 LSG1Q9H089 658 aaKnown RBP18.65■□□□□ 0.58
SHMT2-202ENST00000414700 TAOK3Q9H2K8 898 aa18.65■□□□□ 0.58
SHMT2-202ENST00000414700 RASSF7Q02833 373 aa18.64■□□□□ 0.58
SHMT2-202ENST00000414700 MECOMQ03112 1051 aa18.64■□□□□ 0.58
SHMT2-202ENST00000414700 UBE3CQ15386 1083 aa18.64■□□□□ 0.58
SHMT2-202ENST00000414700 TTLL5Q6EMB2 1281 aa18.64■□□□□ 0.58
SHMT2-202ENST00000414700 FAM205AQ6ZU69 1335 aa18.64■□□□□ 0.57
SHMT2-202ENST00000414700 SALL1Q9NSC2 1324 aa18.64■□□□□ 0.57
SHMT2-202ENST00000414700 PRELPP51888 382 aa18.64■□□□□ 0.57
SHMT2-202ENST00000414700 VPS53Q5VIR6 699 aa18.64■□□□□ 0.57
SHMT2-202ENST00000414700 ZSCAN25Q6NSZ9 544 aa18.64■□□□□ 0.57
SHMT2-202ENST00000414700 TICAM2Q86XR7 235 aa18.64■□□□□ 0.57
SHMT2-202ENST00000414700 LARGE2Q8N3Y3 721 aa18.64■□□□□ 0.57
SHMT2-202ENST00000414700 CERS5Q8N5B7 392 aa18.64■□□□□ 0.57
SHMT2-202ENST00000414700 NSUN4Q96CB9 384 aaKnown RBP18.64■□□□□ 0.57
SHMT2-202ENST00000414700 TBC1D32Q96NH3 1257 aa18.64■□□□□ 0.57
SHMT2-202ENST00000414700 C22orf23Q9BZE7 217 aa18.64■□□□□ 0.57
SHMT2-202ENST00000414700 UPF2Q9HAU5 1272 aaKnown RBP18.64■□□□□ 0.57
SHMT2-202ENST00000414700 HELLSQ9NRZ9 838 aa18.64■□□□□ 0.57
SHMT2-202ENST00000414700 RAD50Q92878 1312 aa18.64■□□□□ 0.57
SHMT2-202ENST00000414700 LRRFIP1Q32MZ4 808 aaKnown RBP18.63■□□□□ 0.57
SHMT2-202ENST00000414700 IARSP41252 1262 aaKnown RBP18.62■□□□□ 0.57
SHMT2-202ENST00000414700 CCDC171Q6TFL3 1326 aa18.62■□□□□ 0.57
SHMT2-202ENST00000414700 MYH2Q9UKX2 1941 aa18.62■□□□□ 0.57
SHMT2-202ENST00000414700 MAST2Q6P0Q8 1798 aa18.62■□□□□ 0.57
SHMT2-202ENST00000414700 LDHBP07195 334 aaKnown RBP18.62■□□□□ 0.57
SHMT2-202ENST00000414700 CYP7A1P22680 504 aa18.62■□□□□ 0.57
SHMT2-202ENST00000414700 MIGA1Q8NAN2 632 aa18.62■□□□□ 0.57
SHMT2-202ENST00000414700 GPAA1O43292 621 aa18.61■□□□□ 0.57
SHMT2-202ENST00000414700 DIXDC1Q155Q3 683 aa18.61■□□□□ 0.57
SHMT2-202ENST00000414700 NAA16Q6N069 864 aaPredicted RBP18.61■□□□□ 0.57
SHMT2-202ENST00000414700 PSME4Q14997 1843 aa18.61■□□□□ 0.57
SHMT2-202ENST00000414700 FOXP2O15409 715 aa18.61■□□□□ 0.57
SHMT2-202ENST00000414700 KIAA1211Q6ZU35 1233 aa18.61■□□□□ 0.57
SHMT2-202ENST00000414700 ZGPATQ8N5A5 531 aaKnown RBP18.61■□□□□ 0.57
SHMT2-202ENST00000414700 YBX3P16989 372 aaKnown RBP eCLIP18.6■□□□□ 0.577e-8■□□□□ 9
SHMT2-202ENST00000414700 DZIP1Q86YF9 867 aaKnown RBP18.6■□□□□ 0.57
SHMT2-202ENST00000414700 F8W031 263 aaPredicted RBP18.59■□□□□ 0.57
SHMT2-202ENST00000414700 DACT2Q5SW24 774 aa18.59■□□□□ 0.57
SHMT2-202ENST00000414700 SPTY2D1Q68D10 685 aaPredicted RBP18.59■□□□□ 0.57
SHMT2-202ENST00000414700 TBC1D22AQ8WUA7 517 aa18.59■□□□□ 0.57
SHMT2-202ENST00000414700 PKNOX2Q96KN3 472 aa18.59■□□□□ 0.57
SHMT2-202ENST00000414700 ARMT1Q9H993 441 aa18.59■□□□□ 0.57
SHMT2-202ENST00000414700 ADAMTSL1Q8N6G6 1762 aa18.59■□□□□ 0.57
SHMT2-202ENST00000414700 RAD17O75943 681 aa18.59■□□□□ 0.57
SHMT2-202ENST00000414700 MBD4O95243 580 aa18.59■□□□□ 0.57
SHMT2-202ENST00000414700 RBM25P49756 843 aaKnown RBP18.59■□□□□ 0.57
SHMT2-202ENST00000414700 GLIPR1L2Q4G1C9 344 aa18.59■□□□□ 0.57
SHMT2-202ENST00000414700 STRIP1Q5VSL9 837 aa18.59■□□□□ 0.57
SHMT2-202ENST00000414700 LCORLQ8N3X6 602 aa18.59■□□□□ 0.57
SHMT2-202ENST00000414700 PALD1Q9ULE6 856 aa18.59■□□□□ 0.57
SHMT2-202ENST00000414700 LTBP3Q9NS15 1303 aa18.58■□□□□ 0.57
SHMT2-202ENST00000414700 USP17L3A6NCW0 530 aa18.58■□□□□ 0.56
SHMT2-202ENST00000414700 USP17L4A6NCW7 530 aa18.58■□□□□ 0.56
SHMT2-202ENST00000414700 HSPD1P10809 573 aaKnown RBP18.58■□□□□ 0.56
SHMT2-202ENST00000414700 USP17L1Q7RTZ2 530 aa18.58■□□□□ 0.56
SHMT2-202ENST00000414700 MAP4K1Q92918 833 aa18.58■□□□□ 0.56
SHMT2-202ENST00000414700 AIDAQ96BJ3 306 aa18.58■□□□□ 0.56
SHMT2-202ENST00000414700 VPS33BQ9H267 617 aa18.58■□□□□ 0.56
SHMT2-202ENST00000414700 DYNLL1P63167 89 aaKnown RBP18.57■□□□□ 0.56
SHMT2-202ENST00000414700 ARHGAP27Q6ZUM4 889 aa18.57■□□□□ 0.56
SHMT2-202ENST00000414700 KIF2CQ99661 725 aa18.57■□□□□ 0.56
SHMT2-202ENST00000414700 SBF1O95248 1867 aa18.57■□□□□ 0.56
SHMT2-202ENST00000414700 NIM1KQ8IY84 436 aa18.57■□□□□ 0.56
SHMT2-202ENST00000414700 STRBPQ96SI9 672 aaKnown RBP18.57■□□□□ 0.56
SHMT2-202ENST00000414700 RIOK1Q9BRS2 568 aaKnown RBP18.57■□□□□ 0.56
SHMT2-202ENST00000414700 AATFQ9NY61 560 aaKnown RBP eCLIP18.57■□□□□ 0.56
SHMT2-202ENST00000414700 RBM8AQ9Y5S9 174 aaKnown RBP18.57■□□□□ 0.56
SHMT2-202ENST00000414700 PRKAB2O43741 272 aa18.56■□□□□ 0.56
SHMT2-202ENST00000414700 KIAA0825Q8IV33 1275 aa18.56■□□□□ 0.56
SHMT2-202ENST00000414700 ZNRF3Q9ULT6 936 aa18.56■□□□□ 0.56
SHMT2-202ENST00000414700 PSMD14O00487 310 aa18.56■□□□□ 0.56
SHMT2-202ENST00000414700 SCNN1DP51172 638 aa18.56■□□□□ 0.56
SHMT2-202ENST00000414700 L1TD1Q5T7N2 865 aaKnown RBP18.56■□□□□ 0.56
SHMT2-202ENST00000414700 TTF2Q9UNY4 1162 aaKnown RBP18.56■□□□□ 0.56
SHMT2-202ENST00000414700 MAGEB6P1A0A0J9YX57 407 aa18.55■□□□□ 0.56
SHMT2-202ENST00000414700 HSPA4P34932 840 aa18.55■□□□□ 0.56
SHMT2-202ENST00000414700 NECTIN1Q15223 517 aa18.55■□□□□ 0.56
SHMT2-202ENST00000414700 JDP2Q8WYK2 163 aa18.55■□□□□ 0.56
SHMT2-202ENST00000414700 TAF6LQ9Y6J9 622 aa18.55■□□□□ 0.56
SHMT2-202ENST00000414700 CXCL9Q07325 125 aa18.54■□□□□ 0.56
SHMT2-202ENST00000414700 RASEFQ8IZ41 740 aa18.54■□□□□ 0.56
SHMT2-202ENST00000414700 DSCC1Q9BVC3 393 aa18.54■□□□□ 0.56
SHMT2-202ENST00000414700 BAZ2AQ9UIF9 1905 aaKnown RBP18.54■□□□□ 0.56
SHMT2-202ENST00000414700 SDR42E1Q8WUS8 393 aa18.54■□□□□ 0.56
SHMT2-202ENST00000414700 ZBTB12Q9Y330 459 aaPredicted RBP18.54■□□□□ 0.56
SHMT2-202ENST00000414700 MROH7-TTC4A0A0A0MT08 1334 aa18.53■□□□□ 0.56
SHMT2-202ENST00000414700 EPB41L2O43491 1005 aaKnown RBP18.53■□□□□ 0.56
SHMT2-202ENST00000414700 EPB41L4AQ9HCS5 686 aaPredicted RBP18.53■□□□□ 0.56
SHMT2-202ENST00000414700 SUGT1Q9Y2Z0 365 aa18.53■□□□□ 0.56
SHMT2-202ENST00000414700 PCDHAC2Q9Y5I4 1007 aa18.53■□□□□ 0.56
SHMT2-202ENST00000414700 DICER1Q9UPY3 1922 aaKnown RBP18.53■□□□□ 0.56
SHMT2-202ENST00000414700 CDK5RAP2Q96SN8 1893 aa18.53■□□□□ 0.56
SHMT2-202ENST00000414700 GSG1L2A8MUP6 293 aa18.52■□□□□ 0.56
SHMT2-202ENST00000414700 FGAP02671 866 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms